RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 KIAA0556O60303 1618 aa13.36□□□□□ -0.27
SORL1-207ENST00000528339 CFAP43Q8NDM7 1665 aa13.36□□□□□ -0.27
SORL1-207ENST00000528339 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
SORL1-207ENST00000528339 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.28
SORL1-207ENST00000528339 KIAA0586Q9BVV6 1533 aa13.32□□□□□ -0.28
SORL1-207ENST00000528339 ARAP1Q96P48 1450 aa13.32□□□□□ -0.28
SORL1-207ENST00000528339 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
SORL1-207ENST00000528339 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
SORL1-207ENST00000528339 ARHGAP35Q9NRY4 1499 aa13.29□□□□□ -0.28
SORL1-207ENST00000528339 MAP3K1Q13233 1512 aa13.28□□□□□ -0.28
SORL1-207ENST00000528339 ABCA8O94911 1581 aa13.25□□□□□ -0.29
SORL1-207ENST00000528339 ADCY10Q96PN6 1610 aa13.23□□□□□ -0.29
SORL1-207ENST00000528339 PCF11O94913 1555 aaKnown RBP13.19□□□□□ -0.3
SORL1-207ENST00000528339 CEP162Q5TB80 1403 aa13.19□□□□□ -0.3
SORL1-207ENST00000528339 ERCC6L2Q5T890 1561 aa13.19□□□□□ -0.3
SORL1-207ENST00000528339 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
SORL1-207ENST00000528339 RAPGEF6Q8TEU7 1601 aa13.15□□□□□ -0.3
SORL1-207ENST00000528339 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
SORL1-207ENST00000528339 FYCO1Q9BQS8 1478 aa13.13□□□□□ -0.31
SORL1-207ENST00000528339 KDM5BQ9UGL1 1544 aa13.12□□□□□ -0.31
SORL1-207ENST00000528339 HECW1Q76N89 1606 aa13.1□□□□□ -0.31
SORL1-207ENST00000528339 TIAM1Q13009 1591 aa13.1□□□□□ -0.31
SORL1-207ENST00000528339 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
SORL1-207ENST00000528339 RIMBP3CA6NJZ7 1639 aa13.08□□□□□ -0.32
SORL1-207ENST00000528339 RIMBP3BA6NNM3 1639 aa13.08□□□□□ -0.32
SORL1-207ENST00000528339 RIMBP3Q9UFD9 1639 aa13.08□□□□□ -0.32
SORL1-207ENST00000528339 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
SORL1-207ENST00000528339 MAGI3Q5TCQ9 1506 aa13.06□□□□□ -0.32
SORL1-207ENST00000528339 CLIP1P30622 1438 aa13.05□□□□□ -0.32
SORL1-207ENST00000528339 ZCCHC11Q5TAX3 1644 aaKnown RBP13.04□□□□□ -0.32
SORL1-207ENST00000528339 NUP153P49790 1475 aaKnown RBP13.03□□□□□ -0.32
SORL1-207ENST00000528339 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
SORL1-207ENST00000528339 LOC105371045A0A1W2PR82 267 aa12.98□□□□□ -0.33
SORL1-207ENST00000528339 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
SORL1-207ENST00000528339 CDC42BPAQ5VT25 1732 aa12.97□□□□□ -0.33
SORL1-207ENST00000528339 FMN1Q68DA7 1419 aa12.96□□□□□ -0.33
SORL1-207ENST00000528339 CROCC2H7BZ55 1655 aa12.95□□□□□ -0.34
SORL1-207ENST00000528339 MAPKBP1O60336 1514 aa12.95□□□□□ -0.34
SORL1-207ENST00000528339 PPRC1Q5VV67 1664 aaKnown RBP12.94□□□□□ -0.34
SORL1-207ENST00000528339 EPRSP07814 1512 aaKnown RBP12.94□□□□□ -0.34
SORL1-207ENST00000528339 FHOD3Q2V2M9 1422 aa12.94□□□□□ -0.34
SORL1-207ENST00000528339 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
SORL1-207ENST00000528339 CDC42BPBQ9Y5S2 1711 aa12.93□□□□□ -0.34
SORL1-207ENST00000528339 PRG4Q92954 1404 aaPredicted RBP12.93□□□□□ -0.34
SORL1-207ENST00000528339 ABCA9Q8IUA7 1624 aa12.93□□□□□ -0.34
SORL1-207ENST00000528339 MAP3K4Q9Y6R4 1608 aa12.92□□□□□ -0.34
SORL1-207ENST00000528339 KIF13AQ9H1H9 1805 aa12.92□□□□□ -0.34
SORL1-207ENST00000528339 ARAP3Q8WWN8 1544 aa12.92□□□□□ -0.34
SORL1-207ENST00000528339 PREX2Q70Z35 1606 aa12.92□□□□□ -0.34
SORL1-207ENST00000528339 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
SORL1-207ENST00000528339 GLI2P10070 1586 aa12.91□□□□□ -0.34
SORL1-207ENST00000528339 ABCC10Q5T3U5 1492 aa12.91□□□□□ -0.34
SORL1-207ENST00000528339 ITSN2Q9NZM3 1697 aa12.89□□□□□ -0.35
SORL1-207ENST00000528339 LRRC9Q6ZRR7 1453 aa12.89□□□□□ -0.35
SORL1-207ENST00000528339 KIF14Q15058 1648 aa12.89□□□□□ -0.35
SORL1-207ENST00000528339 PLB1Q6P1J6 1458 aa12.88□□□□□ -0.35
SORL1-207ENST00000528339 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
SORL1-207ENST00000528339 ATP10BO94823 1461 aa12.86□□□□□ -0.35
SORL1-207ENST00000528339 TCOF1Q13428 1488 aaKnown RBP12.86□□□□□ -0.35
SORL1-207ENST00000528339 MYO5CQ9NQX4 1742 aa12.85□□□□□ -0.35
SORL1-207ENST00000528339 CDK13Q14004 1512 aaKnown RBP12.84□□□□□ -0.35
SORL1-207ENST00000528339 UACAQ9BZF9 1416 aa12.84□□□□□ -0.35
SORL1-207ENST00000528339 TTC37Q6PGP7 1564 aa12.84□□□□□ -0.35
SORL1-207ENST00000528339 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
SORL1-207ENST00000528339 BCORL1Q5H9F3 1711 aa12.82□□□□□ -0.36
SORL1-207ENST00000528339 RRBP1Q9P2E9 1410 aaKnown RBP12.82□□□□□ -0.36
SORL1-207ENST00000528339 CHMP7Q8WUX9 453 aaPredicted RBP12.82□□□□□ -0.36
SORL1-207ENST00000528339 FAM9AQ8IZU1 332 aaPredicted RBP12.81□□□□□ -0.36
SORL1-207ENST00000528339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.81□□□□□ -0.36
SORL1-207ENST00000528339 DIP2BQ9P265 1576 aa12.8□□□□□ -0.36
SORL1-207ENST00000528339 MAST1Q9Y2H9 1570 aa12.8□□□□□ -0.36
SORL1-207ENST00000528339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
SORL1-207ENST00000528339 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
SORL1-207ENST00000528339 ADGBQ8N7X0 1667 aa12.78□□□□□ -0.36
SORL1-207ENST00000528339 ARHGEF5Q12774 1597 aa12.77□□□□□ -0.36
SORL1-207ENST00000528339 DNMT1P26358 1616 aaKnown RBP12.76□□□□□ -0.37
SORL1-207ENST00000528339 SAMD9LQ8IVG5 1584 aa12.75□□□□□ -0.37
SORL1-207ENST00000528339 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
SORL1-207ENST00000528339 PTPN23Q9H3S7 1636 aa12.74□□□□□ -0.37
SORL1-207ENST00000528339 TROQ12816 1431 aaPredicted RBP12.73□□□□□ -0.37
SORL1-207ENST00000528339 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
SORL1-207ENST00000528339 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
SORL1-207ENST00000528339 PTPRGP23470 1445 aa12.72□□□□□ -0.37
SORL1-207ENST00000528339 FRMPD1Q5SYB0 1578 aa12.72□□□□□ -0.37
SORL1-207ENST00000528339 NCOA2Q15596 1464 aa12.7□□□□□ -0.38
SORL1-207ENST00000528339 WDR7Q9Y4E6 1490 aa12.7□□□□□ -0.38
SORL1-207ENST00000528339 PLXNC1O60486 1568 aa12.7□□□□□ -0.38
SORL1-207ENST00000528339 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
SORL1-207ENST00000528339 KDM5CP41229 1560 aa12.69□□□□□ -0.38
SORL1-207ENST00000528339 ABCC1P33527 1531 aa12.69□□□□□ -0.38
SORL1-207ENST00000528339 MIA2Q96PC5 1412 aa12.68□□□□□ -0.38
SORL1-207ENST00000528339 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
SORL1-207ENST00000528339 GPATCH8Q9UKJ3 1502 aaKnown RBP12.67□□□□□ -0.38
SORL1-207ENST00000528339 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
SORL1-207ENST00000528339 SHANK2Q9UPX8 1470 aa12.66□□□□□ -0.38
SORL1-207ENST00000528339 ADGRL2O95490 1459 aa12.65□□□□□ -0.39
SORL1-207ENST00000528339 ZMYM4Q5VZL5 1548 aa12.64□□□□□ -0.39
SORL1-207ENST00000528339 PHLDB1Q86UU1 1377 aa12.64□□□□□ -0.39
SORL1-207ENST00000528339 AKNAQ7Z591 1439 aa12.64□□□□□ -0.39
SORL1-207ENST00000528339 MYOM3Q5VTT5 1437 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms