RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 FAM69CQ0P6D2 419 aa20.07■□□□□ 0.8
CCDC90B-210ENST00000528149 KDM6BO15054 1643 aa20.05■□□□□ 0.8
CCDC90B-210ENST00000528149 DIP2BQ9P265 1576 aa20.04■□□□□ 0.8
CCDC90B-210ENST00000528149 MAPKBP1O60336 1514 aa20.01■□□□□ 0.79
CCDC90B-210ENST00000528149 PRG4Q92954 1404 aaPredicted RBP19.99■□□□□ 0.79
CCDC90B-210ENST00000528149 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
CCDC90B-210ENST00000528149 TSPOAP1O95153 1857 aa19.94■□□□□ 0.78
CCDC90B-210ENST00000528149 ADCY10Q96PN6 1610 aa19.92■□□□□ 0.78
CCDC90B-210ENST00000528149 NPM1P06748 294 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC90B-210ENST00000528149 ADGRL1O94910 1474 aa19.87■□□□□ 0.77
CCDC90B-210ENST00000528149 HECW2Q9P2P5 1572 aa19.87■□□□□ 0.77
CCDC90B-210ENST00000528149 JPH4Q96JJ6 628 aa19.86■□□□□ 0.77
CCDC90B-210ENST00000528149 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
CCDC90B-210ENST00000528149 ERICH3Q5RHP9 1530 aa19.83■□□□□ 0.77
CCDC90B-210ENST00000528149 PPRC1Q5VV67 1664 aaKnown RBP19.74■□□□□ 0.75
CCDC90B-210ENST00000528149 COL17A1Q9UMD9 1497 aaPredicted RBP19.65■□□□□ 0.74
CCDC90B-210ENST00000528149 GLI2P10070 1586 aa19.62■□□□□ 0.73
CCDC90B-210ENST00000528149 FBXO41Q8TF61 875 aa19.62■□□□□ 0.73
CCDC90B-210ENST00000528149 KIF27Q86VH2 1401 aa19.6■□□□□ 0.73
CCDC90B-210ENST00000528149 IGF1RP08069 1367 aa19.6■□□□□ 0.73
CCDC90B-210ENST00000528149 ASXL2Q76L83 1435 aa19.59■□□□□ 0.73
CCDC90B-210ENST00000528149 KIAA0586Q9BVV6 1533 aa19.59■□□□□ 0.73
CCDC90B-210ENST00000528149 ABCC2Q92887 1545 aa19.58■□□□□ 0.73
CCDC90B-210ENST00000528149 PLB1Q6P1J6 1458 aa19.56■□□□□ 0.72
CCDC90B-210ENST00000528149 PTPRGP23470 1445 aa19.55■□□□□ 0.72
CCDC90B-210ENST00000528149 CUL7Q14999 1698 aa19.54■□□□□ 0.72
CCDC90B-210ENST00000528149 MAP3K4Q9Y6R4 1608 aa19.52■□□□□ 0.72
CCDC90B-210ENST00000528149 TTBK1Q5TCY1 1321 aaPredicted RBP19.51■□□□□ 0.71
CCDC90B-210ENST00000528149 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
CCDC90B-210ENST00000528149 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
CCDC90B-210ENST00000528149 CARMIL1Q5VZK9 1371 aa19.45■□□□□ 0.7
CCDC90B-210ENST00000528149 TNIKQ9UKE5 1360 aa19.45■□□□□ 0.7
CCDC90B-210ENST00000528149 UHRF1BP1LA0JNW5 1464 aa19.44■□□□□ 0.7
CCDC90B-210ENST00000528149 CARMIL2Q6F5E8 1435 aa19.39■□□□□ 0.69
CCDC90B-210ENST00000528149 UACAQ9BZF9 1416 aa19.39■□□□□ 0.69
CCDC90B-210ENST00000528149 LMTK3Q96Q04 1460 aa19.38■□□□□ 0.69
CCDC90B-210ENST00000528149 KDM5BQ9UGL1 1544 aa19.37■□□□□ 0.69
CCDC90B-210ENST00000528149 KIF21BO75037 1637 aa19.36■□□□□ 0.69
CCDC90B-210ENST00000528149 ZCCHC11Q5TAX3 1644 aaKnown RBP19.36■□□□□ 0.69
CCDC90B-210ENST00000528149 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
CCDC90B-210ENST00000528149 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
CCDC90B-210ENST00000528149 IQGAP2Q13576 1575 aa19.32■□□□□ 0.68
CCDC90B-210ENST00000528149 PRXQ9BXM0 1461 aa19.32■□□□□ 0.68
CCDC90B-210ENST00000528149 DISP1Q96F81 1524 aa19.3■□□□□ 0.68
CCDC90B-210ENST00000528149 WDR7Q9Y4E6 1490 aa19.28■□□□□ 0.68
CCDC90B-210ENST00000528149 PTPRMP28827 1452 aa19.26■□□□□ 0.67
CCDC90B-210ENST00000528149 CTTNBP2Q8WZ74 1663 aa19.26■□□□□ 0.67
CCDC90B-210ENST00000528149 MAGI3Q5TCQ9 1506 aa19.25■□□□□ 0.67
CCDC90B-210ENST00000528149 CFAP43Q8NDM7 1665 aa19.23■□□□□ 0.67
CCDC90B-210ENST00000528149 PCF11O94913 1555 aaKnown RBP19.23■□□□□ 0.67
CCDC90B-210ENST00000528149 ADAMTSL3P82987 1691 aa19.22■□□□□ 0.67
CCDC90B-210ENST00000528149 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
CCDC90B-210ENST00000528149 EEA1Q15075 1411 aa19.22■□□□□ 0.67
CCDC90B-210ENST00000528149 CD109Q6YHK3 1445 aa19.22■□□□□ 0.67
CCDC90B-210ENST00000528149 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
CCDC90B-210ENST00000528149 ILDR2Q71H61 639 aa19.18■□□□□ 0.66
CCDC90B-210ENST00000528149 KIAA0556O60303 1618 aa19.18■□□□□ 0.66
CCDC90B-210ENST00000528149 UGGT2Q9NYU1 1516 aa19.16■□□□□ 0.66
CCDC90B-210ENST00000528149 SOCS7O14512 581 aa19.15■□□□□ 0.66
CCDC90B-210ENST00000528149 MADDQ8WXG6 1647 aa19.12■□□□□ 0.65
CCDC90B-210ENST00000528149 ARAP3Q8WWN8 1544 aa19.12■□□□□ 0.65
CCDC90B-210ENST00000528149 DISP3Q9P2K9 1392 aa19.12■□□□□ 0.65
CCDC90B-210ENST00000528149 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
CCDC90B-210ENST00000528149 BCORL1Q5H9F3 1711 aa19.1■□□□□ 0.65
CCDC90B-210ENST00000528149 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
CCDC90B-210ENST00000528149 CERKQ8TCT0 537 aa19.05■□□□□ 0.64
CCDC90B-210ENST00000528149 HSPA2P54652 639 aa19.04■□□□□ 0.64
CCDC90B-210ENST00000528149 ABCA8O94911 1581 aa19.03■□□□□ 0.64
CCDC90B-210ENST00000528149 RIMS1Q86UR5 1692 aaKnown RBP19.03■□□□□ 0.64
CCDC90B-210ENST00000528149 P3H3Q8IVL6 736 aa19.02■□□□□ 0.64
CCDC90B-210ENST00000528149 SAMD9Q5K651 1589 aa19.01■□□□□ 0.63
CCDC90B-210ENST00000528149 FRMPD1Q5SYB0 1578 aa18.99■□□□□ 0.63
CCDC90B-210ENST00000528149 RAPGEF3O95398 923 aa18.98■□□□□ 0.63
CCDC90B-210ENST00000528149 ARID4BQ4LE39 1312 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-210ENST00000528149 SPATA31D1Q6ZQQ2 1576 aa18.98■□□□□ 0.63
CCDC90B-210ENST00000528149 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
CCDC90B-210ENST00000528149 ABCA9Q8IUA7 1624 aa18.94■□□□□ 0.62
CCDC90B-210ENST00000528149 PHLDB1Q86UU1 1377 aa18.93■□□□□ 0.62
CCDC90B-210ENST00000528149 FHOD3Q2V2M9 1422 aa18.93■□□□□ 0.62
CCDC90B-210ENST00000528149 ARHGEF40Q8TER5 1519 aa18.93■□□□□ 0.62
CCDC90B-210ENST00000528149 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
CCDC90B-210ENST00000528149 NEO1Q92859 1461 aa18.9■□□□□ 0.62
CCDC90B-210ENST00000528149 ARID3CA6NKF2 412 aa18.89■□□□□ 0.61
CCDC90B-210ENST00000528149 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
CCDC90B-210ENST00000528149 ATP10BO94823 1461 aa18.84■□□□□ 0.61
CCDC90B-210ENST00000528149 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
CCDC90B-210ENST00000528149 SIGLEC1Q9BZZ2 1709 aa18.84■□□□□ 0.61
CCDC90B-210ENST00000528149 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
CCDC90B-210ENST00000528149 RICTORQ6R327 1708 aa18.81■□□□□ 0.6
CCDC90B-210ENST00000528149 EFCAB5A4FU69 1503 aa18.8■□□□□ 0.6
CCDC90B-210ENST00000528149 FANCAO15360 1455 aa18.8■□□□□ 0.6
CCDC90B-210ENST00000528149 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
CCDC90B-210ENST00000528149 TTC37Q6PGP7 1564 aa18.78■□□□□ 0.6
CCDC90B-210ENST00000528149 POGZQ7Z3K3 1410 aa18.78■□□□□ 0.6
CCDC90B-210ENST00000528149 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.59
CCDC90B-210ENST00000528149 DENND4BO75064 1496 aaPredicted RBP18.76■□□□□ 0.59
CCDC90B-210ENST00000528149 PREX1Q8TCU6 1659 aa18.76■□□□□ 0.59
CCDC90B-210ENST00000528149 STRCQ7RTU9 1775 aa18.76■□□□□ 0.59
CCDC90B-210ENST00000528149 AKNAQ7Z591 1439 aa18.75■□□□□ 0.59
CCDC90B-210ENST00000528149 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms