RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
CCDC90B-210ENST00000528149 ABCC9O60706 1549 aa26.17■■□□□ 1.78
CCDC90B-210ENST00000528149 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
CCDC90B-210ENST00000528149 DNAJC5BQ9UF47 199 aa25.22■■□□□ 1.63
CCDC90B-210ENST00000528149 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
CCDC90B-210ENST00000528149 PABPN1Q86U42 306 aaKnown RBP eCLIP24.22■■□□□ 1.47
CCDC90B-210ENST00000528149 NACADO15069 1562 aa24.16■■□□□ 1.46
CCDC90B-210ENST00000528149 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
CCDC90B-210ENST00000528149 BICRAQ9NZM4 1560 aa23.9■■□□□ 1.42
CCDC90B-210ENST00000528149 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.41
CCDC90B-210ENST00000528149 DNAJC5Q9H3Z4 198 aa23.68■■□□□ 1.38
CCDC90B-210ENST00000528149 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.38
CCDC90B-210ENST00000528149 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
CCDC90B-210ENST00000528149 MYO15BQ96JP2 1530 aa23.57■■□□□ 1.36
CCDC90B-210ENST00000528149 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
CCDC90B-210ENST00000528149 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
CCDC90B-210ENST00000528149 EIF4G1Q04637 1599 aaKnown RBP23.36■■□□□ 1.33
CCDC90B-210ENST00000528149 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
CCDC90B-210ENST00000528149 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
CCDC90B-210ENST00000528149 CUX2O14529 1486 aa22.84■■□□□ 1.25
CCDC90B-210ENST00000528149 ERCC6Q03468 1493 aa22.63■■□□□ 1.21
CCDC90B-210ENST00000528149 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
CCDC90B-210ENST00000528149 NCAPD3P42695 1498 aa22.32■■□□□ 1.16
CCDC90B-210ENST00000528149 NESP48681 1621 aa22.28■■□□□ 1.16
CCDC90B-210ENST00000528149 THOC2Q8NI27 1593 aaKnown RBP22.22■■□□□ 1.15
CCDC90B-210ENST00000528149 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
CCDC90B-210ENST00000528149 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
CCDC90B-210ENST00000528149 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
CCDC90B-210ENST00000528149 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
CCDC90B-210ENST00000528149 KIF21AQ7Z4S6 1674 aa21.97■■□□□ 1.11
CCDC90B-210ENST00000528149 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.1
CCDC90B-210ENST00000528149 BAZ1BQ9UIG0 1483 aaKnown RBP21.91■■□□□ 1.1
CCDC90B-210ENST00000528149 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
CCDC90B-210ENST00000528149 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
CCDC90B-210ENST00000528149 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
CCDC90B-210ENST00000528149 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
CCDC90B-210ENST00000528149 WDR62O43379 1518 aa21.71■■□□□ 1.07
CCDC90B-210ENST00000528149 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
CCDC90B-210ENST00000528149 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
CCDC90B-210ENST00000528149 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
CCDC90B-210ENST00000528149 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
CCDC90B-210ENST00000528149 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
CCDC90B-210ENST00000528149 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
CCDC90B-210ENST00000528149 WIZO95785 1651 aa21.5■■□□□ 1.03
CCDC90B-210ENST00000528149 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
CCDC90B-210ENST00000528149 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.01
CCDC90B-210ENST00000528149 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
CCDC90B-210ENST00000528149 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
CCDC90B-210ENST00000528149 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
CCDC90B-210ENST00000528149 CFTRP13569 1480 aa21.21■□□□□ 0.99
CCDC90B-210ENST00000528149 TRHP20396 242 aaPredicted RBP21.19■□□□□ 0.98
CCDC90B-210ENST00000528149 CYB5RLQ6IPT4 315 aa21.18■□□□□ 0.98
CCDC90B-210ENST00000528149 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
CCDC90B-210ENST00000528149 ZNF608Q9ULD9 1512 aaPredicted RBP21.15■□□□□ 0.98
CCDC90B-210ENST00000528149 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
CCDC90B-210ENST00000528149 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
CCDC90B-210ENST00000528149 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
CCDC90B-210ENST00000528149 EIF4G3O43432 1585 aaKnown RBP21.01■□□□□ 0.95
CCDC90B-210ENST00000528149 CHD1O14646 1710 aa21■□□□□ 0.95
CCDC90B-210ENST00000528149 PRDM2Q13029 1718 aa20.96■□□□□ 0.95
CCDC90B-210ENST00000528149 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
CCDC90B-210ENST00000528149 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
CCDC90B-210ENST00000528149 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
CCDC90B-210ENST00000528149 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.93
CCDC90B-210ENST00000528149 FBLN2P98095 1184 aa20.81■□□□□ 0.92
CCDC90B-210ENST00000528149 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
CCDC90B-210ENST00000528149 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
CCDC90B-210ENST00000528149 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
CCDC90B-210ENST00000528149 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
CCDC90B-210ENST00000528149 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
CCDC90B-210ENST00000528149 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
CCDC90B-210ENST00000528149 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
CCDC90B-210ENST00000528149 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
CCDC90B-210ENST00000528149 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
CCDC90B-210ENST00000528149 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
CCDC90B-210ENST00000528149 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
CCDC90B-210ENST00000528149 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
CCDC90B-210ENST00000528149 SOGA1O94964 1423 aa20.49■□□□□ 0.87
CCDC90B-210ENST00000528149 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
CCDC90B-210ENST00000528149 SYNJ2O15056 1496 aa20.45■□□□□ 0.86
CCDC90B-210ENST00000528149 GRIN2BQ13224 1484 aa20.42■□□□□ 0.86
CCDC90B-210ENST00000528149 FGD5Q6ZNL6 1462 aa20.41■□□□□ 0.86
CCDC90B-210ENST00000528149 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
CCDC90B-210ENST00000528149 ILDR1Q86SU0 546 aaPredicted RBP20.37■□□□□ 0.85
CCDC90B-210ENST00000528149 CUX1P39880 1505 aa20.36■□□□□ 0.85
CCDC90B-210ENST00000528149 PBRM1Q86U86 1689 aa20.33■□□□□ 0.85
CCDC90B-210ENST00000528149 KIF13AQ9H1H9 1805 aa20.33■□□□□ 0.85
CCDC90B-210ENST00000528149 CEP170Q5SW79 1584 aa20.24■□□□□ 0.83
CCDC90B-210ENST00000528149 KDM4FA0A1W2PPD8 638 aa20.19■□□□□ 0.82
CCDC90B-210ENST00000528149 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
CCDC90B-210ENST00000528149 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
CCDC90B-210ENST00000528149 SHROOM2Q13796 1616 aa20.15■□□□□ 0.82
CCDC90B-210ENST00000528149 NUP160Q12769 1436 aa20.14■□□□□ 0.81
CCDC90B-210ENST00000528149 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
CCDC90B-210ENST00000528149 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
CCDC90B-210ENST00000528149 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
CCDC90B-210ENST00000528149 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
CCDC90B-210ENST00000528149 ADAMTS12P58397 1594 aa20.1■□□□□ 0.81
CCDC90B-210ENST00000528149 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
CCDC90B-210ENST00000528149 ABCC10Q5T3U5 1492 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms