RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
PSMD13-206ENST00000527047 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
PSMD13-206ENST00000527047 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
PSMD13-206ENST00000527047 CAPN15O75808 1086 aa19.91■□□□□ 0.78
PSMD13-206ENST00000527047 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
PSMD13-206ENST00000527047 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
PSMD13-206ENST00000527047 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
PSMD13-206ENST00000527047 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
PSMD13-206ENST00000527047 IGF1RP08069 1367 aa19.83■□□□□ 0.76
PSMD13-206ENST00000527047 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
PSMD13-206ENST00000527047 SYNJ2O15056 1496 aa19.78■□□□□ 0.76
PSMD13-206ENST00000527047 CHD1O14646 1710 aa19.77■□□□□ 0.76
PSMD13-206ENST00000527047 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
PSMD13-206ENST00000527047 CUL7Q14999 1698 aa19.76■□□□□ 0.75
PSMD13-206ENST00000527047 DSG3P32926 999 aa19.74■□□□□ 0.75
PSMD13-206ENST00000527047 EEA1Q15075 1411 aa19.74■□□□□ 0.75
PSMD13-206ENST00000527047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
PSMD13-206ENST00000527047 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
PSMD13-206ENST00000527047 GRIN2AQ12879 1464 aa19.69■□□□□ 0.74
PSMD13-206ENST00000527047 MYCNP04198 464 aaPredicted RBP19.69■□□□□ 0.74
PSMD13-206ENST00000527047 CARMIL1Q5VZK9 1371 aa19.69■□□□□ 0.74
PSMD13-206ENST00000527047 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
PSMD13-206ENST00000527047 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
PSMD13-206ENST00000527047 FOXD4L1Q9NU39 408 aa19.68■□□□□ 0.74
PSMD13-206ENST00000527047 SAMD1Q6SPF0 538 aaPredicted RBP19.67■□□□□ 0.74
PSMD13-206ENST00000527047 FBLN2P98095 1184 aa19.66■□□□□ 0.74
PSMD13-206ENST00000527047 PRXQ9BXM0 1461 aa19.66■□□□□ 0.74
PSMD13-206ENST00000527047 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
PSMD13-206ENST00000527047 ZBTB22O15209 634 aa19.63■□□□□ 0.73
PSMD13-206ENST00000527047 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
PSMD13-206ENST00000527047 APLP2Q06481 763 aa19.62■□□□□ 0.73
PSMD13-206ENST00000527047 NUP160Q12769 1436 aa19.61■□□□□ 0.73
PSMD13-206ENST00000527047 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
PSMD13-206ENST00000527047 CEP170Q5SW79 1584 aa19.6■□□□□ 0.73
PSMD13-206ENST00000527047 CLASP1Q7Z460 1538 aa19.58■□□□□ 0.73
PSMD13-206ENST00000527047 FAM9AQ8IZU1 332 aaPredicted RBP19.58■□□□□ 0.72
PSMD13-206ENST00000527047 ZNF219Q9P2Y4 722 aaPredicted RBP19.55■□□□□ 0.72
PSMD13-206ENST00000527047 KIF21BO75037 1637 aa19.54■□□□□ 0.72
PSMD13-206ENST00000527047 ABCB7O75027 752 aa19.54■□□□□ 0.72
PSMD13-206ENST00000527047 KIAA0586Q9BVV6 1533 aa19.48■□□□□ 0.71
PSMD13-206ENST00000527047 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
PSMD13-206ENST00000527047 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
PSMD13-206ENST00000527047 CTTNBP2Q8WZ74 1663 aa19.44■□□□□ 0.7
PSMD13-206ENST00000527047 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
PSMD13-206ENST00000527047 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
PSMD13-206ENST00000527047 ATF5Q9Y2D1 282 aaPredicted RBP19.39■□□□□ 0.69
PSMD13-206ENST00000527047 JPH4Q96JJ6 628 aa19.37■□□□□ 0.69
PSMD13-206ENST00000527047 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
PSMD13-206ENST00000527047 UGGT2Q9NYU1 1516 aa19.34■□□□□ 0.69
PSMD13-206ENST00000527047 RIMBP3CA6NJZ7 1639 aa19.33■□□□□ 0.69
PSMD13-206ENST00000527047 RIMBP3BA6NNM3 1639 aa19.33■□□□□ 0.69
PSMD13-206ENST00000527047 RIMBP3Q9UFD9 1639 aa19.33■□□□□ 0.69
PSMD13-206ENST00000527047 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
PSMD13-206ENST00000527047 PRG4Q92954 1404 aaPredicted RBP19.31■□□□□ 0.68
PSMD13-206ENST00000527047 DISP1Q96F81 1524 aa19.27■□□□□ 0.68
PSMD13-206ENST00000527047 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
PSMD13-206ENST00000527047 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
PSMD13-206ENST00000527047 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
PSMD13-206ENST00000527047 TNIKQ9UKE5 1360 aa19.23■□□□□ 0.67
PSMD13-206ENST00000527047 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
PSMD13-206ENST00000527047 POLA2Q14181 598 aa19.22■□□□□ 0.67
PSMD13-206ENST00000527047 CARMIL2Q6F5E8 1435 aa19.22■□□□□ 0.67
PSMD13-206ENST00000527047 SAMD9Q5K651 1589 aa19.22■□□□□ 0.67
PSMD13-206ENST00000527047 LOC105371045A0A1W2PR82 267 aa19.19■□□□□ 0.66
PSMD13-206ENST00000527047 EFCAB5A4FU69 1503 aa19.16■□□□□ 0.66
PSMD13-206ENST00000527047 ARHGAP35Q9NRY4 1499 aa19.12■□□□□ 0.65
PSMD13-206ENST00000527047 PTPRGP23470 1445 aa19.1■□□□□ 0.65
PSMD13-206ENST00000527047 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
PSMD13-206ENST00000527047 RANGAP1P46060 587 aaPredicted RBP19.08■□□□□ 0.64
PSMD13-206ENST00000527047 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
PSMD13-206ENST00000527047 CLIP1P30622 1438 aa19.06■□□□□ 0.64
PSMD13-206ENST00000527047 FHOD3Q2V2M9 1422 aa19.06■□□□□ 0.64
PSMD13-206ENST00000527047 CEP162Q5TB80 1403 aa19.06■□□□□ 0.64
PSMD13-206ENST00000527047 ADCY10Q96PN6 1610 aa19.02■□□□□ 0.64
PSMD13-206ENST00000527047 ABCA8O94911 1581 aa19.02■□□□□ 0.63
PSMD13-206ENST00000527047 UHRF1BP1LA0JNW5 1464 aa19.01■□□□□ 0.63
PSMD13-206ENST00000527047 UACAQ9BZF9 1416 aa19■□□□□ 0.63
PSMD13-206ENST00000527047 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
PSMD13-206ENST00000527047 ABCC2Q92887 1545 aa18.99■□□□□ 0.63
PSMD13-206ENST00000527047 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
PSMD13-206ENST00000527047 ATXN8OSP0DMR3 200 aa18.98■□□□□ 0.63
PSMD13-206ENST00000527047 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
PSMD13-206ENST00000527047 RAPGEF6Q8TEU7 1601 aa18.95■□□□□ 0.62
PSMD13-206ENST00000527047 KDM5BQ9UGL1 1544 aa18.91■□□□□ 0.62
PSMD13-206ENST00000527047 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
PSMD13-206ENST00000527047 ZCCHC11Q5TAX3 1644 aaKnown RBP18.87■□□□□ 0.61
PSMD13-206ENST00000527047 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
PSMD13-206ENST00000527047 CASKIN1Q8WXD9 1431 aa18.86■□□□□ 0.61
PSMD13-206ENST00000527047 HECW1Q76N89 1606 aa18.85■□□□□ 0.61
PSMD13-206ENST00000527047 ATP10BO94823 1461 aa18.84■□□□□ 0.61
PSMD13-206ENST00000527047 MAPKBP1O60336 1514 aa18.84■□□□□ 0.61
PSMD13-206ENST00000527047 LRRIQ1Q96JM4 1722 aa18.83■□□□□ 0.61
PSMD13-206ENST00000527047 FYCO1Q9BQS8 1478 aa18.83■□□□□ 0.6
PSMD13-206ENST00000527047 VPS8Q8N3P4 1428 aa18.82■□□□□ 0.6
PSMD13-206ENST00000527047 NPM1P06748 294 aaKnown RBP eCLIP18.81■□□□□ 0.6
PSMD13-206ENST00000527047 EPRSP07814 1512 aaKnown RBP18.79■□□□□ 0.6
PSMD13-206ENST00000527047 CDK13Q14004 1512 aaKnown RBP18.77■□□□□ 0.6
PSMD13-206ENST00000527047 ASXL2Q76L83 1435 aa18.76■□□□□ 0.59
PSMD13-206ENST00000527047 ARID3CA6NKF2 412 aa18.75■□□□□ 0.59
PSMD13-206ENST00000527047 CCDC18Q5T9S5 1454 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms