RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 AEBP2Q6ZN18 517 aaPredicted RBP33.32■■■□□ 2.92
PSMD13-206ENST00000527047 CHIC1Q5VXU3 224 aa31.82■■■□□ 2.68
PSMD13-206ENST00000527047 NISCHQ9Y2I1 1504 aa28.27■■■□□ 2.12
PSMD13-206ENST00000527047 SENP3Q9H4L4 574 aaPredicted RBP28.2■■■□□ 2.1
PSMD13-206ENST00000527047 PHF23Q9BUL5 403 aaPredicted RBP28.02■■■□□ 2.08
PSMD13-206ENST00000527047 FOXD1Q16676 465 aa26.37■■□□□ 1.81
PSMD13-206ENST00000527047 PLPPR3Q6T4P5 718 aa25.51■■□□□ 1.67
PSMD13-206ENST00000527047 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
PSMD13-206ENST00000527047 PPP6R1Q9UPN7 881 aa24.95■■□□□ 1.58
PSMD13-206ENST00000527047 ADRA2BP18089 450 aa24.87■■□□□ 1.57
PSMD13-206ENST00000527047 PIAS4Q8N2W9 510 aaPredicted RBP24.66■■□□□ 1.54
PSMD13-206ENST00000527047 MSH5O43196 834 aa24.42■■□□□ 1.5
PSMD13-206ENST00000527047 ABCC9O60706 1549 aa24.12■■□□□ 1.45
PSMD13-206ENST00000527047 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
PSMD13-206ENST00000527047 POTEDQ86YR6 584 aa23.47■■□□□ 1.35
PSMD13-206ENST00000527047 NACADO15069 1562 aa23.44■■□□□ 1.34
PSMD13-206ENST00000527047 DCAF1Q9Y4B6 1507 aa23.44■■□□□ 1.34
PSMD13-206ENST00000527047 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
PSMD13-206ENST00000527047 RB1CC1Q8TDY2 1594 aa23.36■■□□□ 1.33
PSMD13-206ENST00000527047 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
PSMD13-206ENST00000527047 UNC13AQ9UPW8 1703 aa22.91■■□□□ 1.26
PSMD13-206ENST00000527047 MAPK8IP2Q13387 824 aaPredicted RBP22.8■■□□□ 1.24
PSMD13-206ENST00000527047 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
PSMD13-206ENST00000527047 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
PSMD13-206ENST00000527047 PABPN1Q86U42 306 aaKnown RBP eCLIP22.57■■□□□ 1.2
PSMD13-206ENST00000527047 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
PSMD13-206ENST00000527047 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
PSMD13-206ENST00000527047 PPP4R3CPQ6ZMV5 832 aa22.46■■□□□ 1.19
PSMD13-206ENST00000527047 DMRT2Q9Y5R5 561 aa22.45■■□□□ 1.18
PSMD13-206ENST00000527047 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
PSMD13-206ENST00000527047 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
PSMD13-206ENST00000527047 CNKSR2Q8WXI2 1034 aa21.91■■□□□ 1.1
PSMD13-206ENST00000527047 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
PSMD13-206ENST00000527047 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
PSMD13-206ENST00000527047 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
PSMD13-206ENST00000527047 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
PSMD13-206ENST00000527047 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
PSMD13-206ENST00000527047 HOXD11P31277 338 aaPredicted RBP21.74■■□□□ 1.07
PSMD13-206ENST00000527047 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
PSMD13-206ENST00000527047 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
PSMD13-206ENST00000527047 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
PSMD13-206ENST00000527047 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.06
PSMD13-206ENST00000527047 RNF216Q9NWF9 866 aaPredicted RBP21.64■■□□□ 1.05
PSMD13-206ENST00000527047 NCAPD3P42695 1498 aa21.64■■□□□ 1.05
PSMD13-206ENST00000527047 NCBP3Q53F19 620 aaKnown RBP21.58■■□□□ 1.05
PSMD13-206ENST00000527047 WIZO95785 1651 aa21.57■■□□□ 1.04
PSMD13-206ENST00000527047 DCAF8L1A6NGE4 600 aa21.56■■□□□ 1.04
PSMD13-206ENST00000527047 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
PSMD13-206ENST00000527047 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
PSMD13-206ENST00000527047 NPM3O75607 178 aaKnown RBP21.39■■□□□ 1.01
PSMD13-206ENST00000527047 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
PSMD13-206ENST00000527047 KCNA4P22459 653 aa21.28■■□□□ 1
PSMD13-206ENST00000527047 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
PSMD13-206ENST00000527047 CCDC88BA6NC98 1476 aa21.09■□□□□ 0.97
PSMD13-206ENST00000527047 LAMC3Q9Y6N6 1575 aa21■□□□□ 0.95
PSMD13-206ENST00000527047 NESP48681 1621 aa20.99■□□□□ 0.95
PSMD13-206ENST00000527047 CADPSQ9ULU8 1353 aa20.98■□□□□ 0.95
PSMD13-206ENST00000527047 CFTRP13569 1480 aa20.95■□□□□ 0.94
PSMD13-206ENST00000527047 RNF39Q9H2S5 420 aa20.95■□□□□ 0.94
PSMD13-206ENST00000527047 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
PSMD13-206ENST00000527047 CACNB1Q02641 598 aaPredicted RBP20.85■□□□□ 0.93
PSMD13-206ENST00000527047 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
PSMD13-206ENST00000527047 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.92
PSMD13-206ENST00000527047 ERCC6Q03468 1493 aa20.74■□□□□ 0.91
PSMD13-206ENST00000527047 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
PSMD13-206ENST00000527047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.72■□□□□ 0.91
PSMD13-206ENST00000527047 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
PSMD13-206ENST00000527047 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.9
PSMD13-206ENST00000527047 MRC2Q9UBG0 1479 aa20.6■□□□□ 0.89
PSMD13-206ENST00000527047 C1QBPQ07021 282 aaKnown RBP20.59■□□□□ 0.89
PSMD13-206ENST00000527047 WDR62O43379 1518 aa20.55■□□□□ 0.88
PSMD13-206ENST00000527047 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
PSMD13-206ENST00000527047 CUX2O14529 1486 aa20.47■□□□□ 0.87
PSMD13-206ENST00000527047 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
PSMD13-206ENST00000527047 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
PSMD13-206ENST00000527047 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
PSMD13-206ENST00000527047 CUX1P39880 1505 aa20.43■□□□□ 0.86
PSMD13-206ENST00000527047 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
PSMD13-206ENST00000527047 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
PSMD13-206ENST00000527047 U3KPZ7 1027 aaPredicted RBP20.36■□□□□ 0.85
PSMD13-206ENST00000527047 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
PSMD13-206ENST00000527047 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
PSMD13-206ENST00000527047 TOP2BQ02880 1626 aa20.33■□□□□ 0.84
PSMD13-206ENST00000527047 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
PSMD13-206ENST00000527047 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
PSMD13-206ENST00000527047 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
PSMD13-206ENST00000527047 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
PSMD13-206ENST00000527047 SOGA1O94964 1423 aa20.19■□□□□ 0.82
PSMD13-206ENST00000527047 RAD54L2Q9Y4B4 1467 aa20.19■□□□□ 0.82
PSMD13-206ENST00000527047 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
PSMD13-206ENST00000527047 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
PSMD13-206ENST00000527047 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
PSMD13-206ENST00000527047 SLC4A1APQ9BWU0 796 aaKnown RBP20.09■□□□□ 0.81
PSMD13-206ENST00000527047 EIF4G3O43432 1585 aaKnown RBP20.07■□□□□ 0.8
PSMD13-206ENST00000527047 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
PSMD13-206ENST00000527047 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
PSMD13-206ENST00000527047 AQRO60306 1485 aaKnown RBP eCLIP20.04■□□□□ 0.82e-6■■■■□ 25.7
PSMD13-206ENST00000527047 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
PSMD13-206ENST00000527047 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
PSMD13-206ENST00000527047 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms