RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 DIEXFQ68CQ4 756 aaKnown RBP14.42□□□□□ -0.1
USP35-201ENST00000526425 KIF21BO75037 1637 aa14.42□□□□□ -0.1
USP35-201ENST00000526425 ANO8Q9HCE9 1232 aaPredicted RBP14.42□□□□□ -0.1
USP35-201ENST00000526425 PRXQ9BXM0 1461 aa14.39□□□□□ -0.11
USP35-201ENST00000526425 URB2Q14146 1524 aaKnown RBP14.38□□□□□ -0.11
USP35-201ENST00000526425 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
USP35-201ENST00000526425 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
USP35-201ENST00000526425 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
USP35-201ENST00000526425 VPS8Q8N3P4 1428 aa14.34□□□□□ -0.11
USP35-201ENST00000526425 ERICH3Q5RHP9 1530 aa14.34□□□□□ -0.11
USP35-201ENST00000526425 KANK4Q5T7N3 995 aaPredicted RBP14.33□□□□□ -0.12
USP35-201ENST00000526425 GAPVD1Q14C86 1478 aa14.33□□□□□ -0.12
USP35-201ENST00000526425 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
USP35-201ENST00000526425 CHMP7Q8WUX9 453 aaPredicted RBP14.3□□□□□ -0.12
USP35-201ENST00000526425 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.12
USP35-201ENST00000526425 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
USP35-201ENST00000526425 ZNF316A6NFI3 1004 aaPredicted RBP14.24□□□□□ -0.13
USP35-201ENST00000526425 SLC24A1O60721 1099 aa14.21□□□□□ -0.13
USP35-201ENST00000526425 IFT140Q96RY7 1462 aa14.19□□□□□ -0.14
USP35-201ENST00000526425 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
USP35-201ENST00000526425 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
USP35-201ENST00000526425 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
USP35-201ENST00000526425 FHOD3Q2V2M9 1422 aa14.17□□□□□ -0.14
USP35-201ENST00000526425 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
USP35-201ENST00000526425 ARHGAP35Q9NRY4 1499 aa14.17□□□□□ -0.14
USP35-201ENST00000526425 BCANQ96GW7 911 aa14.16□□□□□ -0.14
USP35-201ENST00000526425 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.14□□□□□ -0.15
USP35-201ENST00000526425 ZNF608Q9ULD9 1512 aaPredicted RBP14.13□□□□□ -0.15
USP35-201ENST00000526425 CUL7Q14999 1698 aa14.11□□□□□ -0.15
USP35-201ENST00000526425 CHIC2Q9UKJ5 165 aa14.1□□□□□ -0.15
USP35-201ENST00000526425 MTUS2Q5JR59 1369 aa14.1□□□□□ -0.15
USP35-201ENST00000526425 FMN1Q68DA7 1419 aa14.09□□□□□ -0.15
USP35-201ENST00000526425 PLEKHG5O94827 1062 aa14.09□□□□□ -0.15
USP35-201ENST00000526425 SALL2Q9Y467 1007 aaPredicted RBP14.08□□□□□ -0.15
USP35-201ENST00000526425 TRIM52Q96A61 297 aa14.08□□□□□ -0.16
USP35-201ENST00000526425 WDR62O43379 1518 aa14.08□□□□□ -0.16
USP35-201ENST00000526425 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
USP35-201ENST00000526425 MIER1Q8N108 512 aa14.07□□□□□ -0.16
USP35-201ENST00000526425 HIRIP3Q9BW71 556 aaPredicted RBP14.07□□□□□ -0.16
USP35-201ENST00000526425 SNAPC4Q5SXM2 1469 aa14.07□□□□□ -0.16
USP35-201ENST00000526425 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
USP35-201ENST00000526425 CNGB1Q14028 1251 aaPredicted RBP14.05□□□□□ -0.16
USP35-201ENST00000526425 ABCA5Q8WWZ7 1642 aa14.04□□□□□ -0.16
USP35-201ENST00000526425 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
USP35-201ENST00000526425 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
USP35-201ENST00000526425 CDK11AQ9UQ88 783 aaPredicted RBP14.03□□□□□ -0.16
USP35-201ENST00000526425 SIN3AQ96ST3 1273 aa14.02□□□□□ -0.17
USP35-201ENST00000526425 JPH4Q96JJ6 628 aa14.01□□□□□ -0.17
USP35-201ENST00000526425 EFCAB5A4FU69 1503 aa14□□□□□ -0.17
USP35-201ENST00000526425 ZNF777Q9ULD5 760 aaPredicted RBP14□□□□□ -0.17
USP35-201ENST00000526425 RRP7BPQ9NSQ0 103 aa13.99□□□□□ -0.17
USP35-201ENST00000526425 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.17
USP35-201ENST00000526425 POLR3GLQ9BT43 218 aa13.96□□□□□ -0.18
USP35-201ENST00000526425 CASKIN1Q8WXD9 1431 aa13.96□□□□□ -0.18
USP35-201ENST00000526425 MAGI1Q96QZ7 1491 aaPredicted RBP13.96□□□□□ -0.18
USP35-201ENST00000526425 WDR97A6NE52 1622 aa13.95□□□□□ -0.18
USP35-201ENST00000526425 GRIN2AQ12879 1464 aa13.95□□□□□ -0.18
USP35-201ENST00000526425 SYNJ2O15056 1496 aa13.94□□□□□ -0.18
USP35-201ENST00000526425 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
USP35-201ENST00000526425 ADAMTS12P58397 1594 aa13.94□□□□□ -0.18
USP35-201ENST00000526425 IQGAP2Q13576 1575 aa13.93□□□□□ -0.18
USP35-201ENST00000526425 KIAA0586Q9BVV6 1533 aa13.93□□□□□ -0.18
USP35-201ENST00000526425 FYCO1Q9BQS8 1478 aa13.93□□□□□ -0.18
USP35-201ENST00000526425 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
USP35-201ENST00000526425 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
USP35-201ENST00000526425 DDX10Q13206 875 aaKnown RBP13.92□□□□□ -0.18
USP35-201ENST00000526425 PBRM1Q86U86 1689 aa13.91□□□□□ -0.18
USP35-201ENST00000526425 RAB3GAP2Q9H2M9 1393 aa13.91□□□□□ -0.18
USP35-201ENST00000526425 CTTNBP2Q8WZ74 1663 aa13.9□□□□□ -0.18
USP35-201ENST00000526425 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.19
USP35-201ENST00000526425 TIAM1Q13009 1591 aa13.89□□□□□ -0.19
USP35-201ENST00000526425 ZNF326Q5BKZ1 582 aaKnown RBP13.89□□□□□ -0.19
USP35-201ENST00000526425 SUPT16HQ9Y5B9 1047 aaKnown RBP13.89□□□□□ -0.19
USP35-201ENST00000526425 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
USP35-201ENST00000526425 PLEKHD1A6NEE1 506 aa13.87□□□□□ -0.19
USP35-201ENST00000526425 PHLDB1Q86UU1 1377 aa13.87□□□□□ -0.19
USP35-201ENST00000526425 DEKP35659 375 aaKnown RBP13.86□□□□□ -0.19
USP35-201ENST00000526425 PODXL2Q9NZ53 605 aa13.85□□□□□ -0.19
USP35-201ENST00000526425 TONSLQ96HA7 1378 aa13.83□□□□□ -0.2
USP35-201ENST00000526425 NBR1Q14596 966 aa13.83□□□□□ -0.2
USP35-201ENST00000526425 MAP3K1Q13233 1512 aa13.82□□□□□ -0.2
USP35-201ENST00000526425 RRBP1Q9P2E9 1410 aaKnown RBP13.82□□□□□ -0.2
USP35-201ENST00000526425 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
USP35-201ENST00000526425 PKNOX2Q96KN3 472 aa13.81□□□□□ -0.2
USP35-201ENST00000526425 PTPRGP23470 1445 aa13.81□□□□□ -0.2
USP35-201ENST00000526425 CCDC18Q5T9S5 1454 aa13.81□□□□□ -0.2
USP35-201ENST00000526425 FOXD1Q16676 465 aa13.8□□□□□ -0.2
USP35-201ENST00000526425 CFDP1Q9UEE9 299 aaPredicted RBP13.8□□□□□ -0.2
USP35-201ENST00000526425 MYT1LQ9UL68 1186 aa13.8□□□□□ -0.2
USP35-201ENST00000526425 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
USP35-201ENST00000526425 UBE2Q2Q8WVN8 375 aa13.79□□□□□ -0.2
USP35-201ENST00000526425 UGGT2Q9NYU1 1516 aa13.78□□□□□ -0.2
USP35-201ENST00000526425 KCNH8Q96L42 1107 aa13.77□□□□□ -0.21
USP35-201ENST00000526425 NCOA2Q15596 1464 aa13.77□□□□□ -0.21
USP35-201ENST00000526425 SAMD9Q5K651 1589 aa13.76□□□□□ -0.21
USP35-201ENST00000526425 EPRSP07814 1512 aaKnown RBP13.76□□□□□ -0.21
USP35-201ENST00000526425 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
USP35-201ENST00000526425 HECW1Q76N89 1606 aa13.76□□□□□ -0.21
USP35-201ENST00000526425 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
USP35-201ENST00000526425 NUP160Q12769 1436 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms