RNA–Protein interactions for RNA: ENST00000526195.5

CTSB-210, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-210ENST00000526195 JPH4Q96JJ6 628 aa27.44■■□□□ 1.98
CTSB-210ENST00000526195 PRG4Q92954 1404 aaPredicted RBP27.4■■□□□ 1.98
CTSB-210ENST00000526195 KIAA0586Q9BVV6 1533 aa27.38■■□□□ 1.97
CTSB-210ENST00000526195 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
CTSB-210ENST00000526195 PRXQ9BXM0 1461 aa27.19■■□□□ 1.94
CTSB-210ENST00000526195 IQGAP2Q13576 1575 aa27.18■■□□□ 1.94
CTSB-210ENST00000526195 TRHP20396 242 aaPredicted RBP27.17■■□□□ 1.94
CTSB-210ENST00000526195 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
CTSB-210ENST00000526195 CSRNP3Q8WYN3 585 aa27.13■■□□□ 1.93
CTSB-210ENST00000526195 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
CTSB-210ENST00000526195 EEA1Q15075 1411 aa27.07■■□□□ 1.92
CTSB-210ENST00000526195 DISP1Q96F81 1524 aa27.06■■□□□ 1.92
CTSB-210ENST00000526195 FAM9AQ8IZU1 332 aaPredicted RBP27.05■■□□□ 1.92
CTSB-210ENST00000526195 UGGT2Q9NYU1 1516 aa27.05■■□□□ 1.92
CTSB-210ENST00000526195 TTBK1Q5TCY1 1321 aaPredicted RBP27.04■■□□□ 1.92
CTSB-210ENST00000526195 PTPRGP23470 1445 aa27.04■■□□□ 1.92
CTSB-210ENST00000526195 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
CTSB-210ENST00000526195 CTTNBP2Q8WZ74 1663 aa27■■□□□ 1.91
CTSB-210ENST00000526195 ADCY10Q96PN6 1610 aa26.99■■□□□ 1.91
CTSB-210ENST00000526195 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
CTSB-210ENST00000526195 NPM1P06748 294 aaKnown RBP eCLIP26.91■■□□□ 1.9
CTSB-210ENST00000526195 UACAQ9BZF9 1416 aa26.85■■□□□ 1.89
CTSB-210ENST00000526195 GOLGA3Q08378 1498 aa26.85■■□□□ 1.89
CTSB-210ENST00000526195 MAPKBP1O60336 1514 aa26.84■■□□□ 1.89
CTSB-210ENST00000526195 UHRF1BP1LA0JNW5 1464 aa26.81■■□□□ 1.88
CTSB-210ENST00000526195 ABCC2Q92887 1545 aa26.81■■□□□ 1.88
CTSB-210ENST00000526195 KIF21BO75037 1637 aa26.8■■□□□ 1.88
CTSB-210ENST00000526195 ABCC10Q5T3U5 1492 aa26.76■■□□□ 1.87
CTSB-210ENST00000526195 P3H3Q8IVL6 736 aa26.76■■□□□ 1.87
CTSB-210ENST00000526195 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
CTSB-210ENST00000526195 PLB1Q6P1J6 1458 aa26.74■■□□□ 1.87
CTSB-210ENST00000526195 FAM69CQ0P6D2 419 aa26.74■■□□□ 1.87
CTSB-210ENST00000526195 KIF13AQ9H1H9 1805 aa26.74■■□□□ 1.87
CTSB-210ENST00000526195 RANGAP1P46060 587 aaPredicted RBP26.72■■□□□ 1.87
CTSB-210ENST00000526195 SAMD9Q5K651 1589 aa26.7■■□□□ 1.86
CTSB-210ENST00000526195 DIP2BQ9P265 1576 aa26.7■■□□□ 1.86
CTSB-210ENST00000526195 KDM5BQ9UGL1 1544 aa26.7■■□□□ 1.86
CTSB-210ENST00000526195 ASXL2Q76L83 1435 aa26.68■■□□□ 1.86
CTSB-210ENST00000526195 ABCA8O94911 1581 aa26.67■■□□□ 1.86
CTSB-210ENST00000526195 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.86
CTSB-210ENST00000526195 ZCCHC11Q5TAX3 1644 aaKnown RBP26.62■■□□□ 1.85
CTSB-210ENST00000526195 FHOD3Q2V2M9 1422 aa26.58■■□□□ 1.85
CTSB-210ENST00000526195 ARID3CA6NKF2 412 aa26.53■■□□□ 1.84
CTSB-210ENST00000526195 EFCAB5A4FU69 1503 aa26.52■■□□□ 1.84
CTSB-210ENST00000526195 EPRSP07814 1512 aaKnown RBP26.51■■□□□ 1.83
CTSB-210ENST00000526195 GLI2P10070 1586 aa26.5■■□□□ 1.83
CTSB-210ENST00000526195 WDR7Q9Y4E6 1490 aa26.49■■□□□ 1.83
CTSB-210ENST00000526195 ATP10BO94823 1461 aa26.47■■□□□ 1.83
CTSB-210ENST00000526195 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
CTSB-210ENST00000526195 TSPOAP1O95153 1857 aa26.46■■□□□ 1.83
CTSB-210ENST00000526195 NUP153P49790 1475 aaKnown RBP26.42■■□□□ 1.82
CTSB-210ENST00000526195 ARHGAP35Q9NRY4 1499 aa26.42■■□□□ 1.82
CTSB-210ENST00000526195 KCNH8Q96L42 1107 aa26.41■■□□□ 1.82
CTSB-210ENST00000526195 PPRC1Q5VV67 1664 aaKnown RBP26.38■■□□□ 1.81
CTSB-210ENST00000526195 MAP3K4Q9Y6R4 1608 aa26.36■■□□□ 1.81
CTSB-210ENST00000526195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.35■■□□□ 1.81
CTSB-210ENST00000526195 HNRNPUL2Q1KMD3 747 aaKnown RBP26.35■■□□□ 1.81
CTSB-210ENST00000526195 KDM6BO15054 1643 aa26.3■■□□□ 1.8
CTSB-210ENST00000526195 FMN1Q68DA7 1419 aa26.3■■□□□ 1.8
CTSB-210ENST00000526195 CD109Q6YHK3 1445 aa26.29■■□□□ 1.8
CTSB-210ENST00000526195 TEX14Q8IWB6 1497 aa26.25■■□□□ 1.79
CTSB-210ENST00000526195 CFAP43Q8NDM7 1665 aa26.23■■□□□ 1.79
CTSB-210ENST00000526195 ATP1B4Q9UN42 357 aaPredicted RBP26.23■■□□□ 1.79
CTSB-210ENST00000526195 CDK13Q14004 1512 aaKnown RBP26.22■■□□□ 1.79
CTSB-210ENST00000526195 MAGI3Q5TCQ9 1506 aa26.22■■□□□ 1.79
CTSB-210ENST00000526195 COL17A1Q9UMD9 1497 aaPredicted RBP26.22■■□□□ 1.79
CTSB-210ENST00000526195 PLEKHD1A6NEE1 506 aa26.21■■□□□ 1.79
CTSB-210ENST00000526195 CLIP1P30622 1438 aa26.19■■□□□ 1.78
CTSB-210ENST00000526195 HECW1Q76N89 1606 aa26.17■■□□□ 1.78
CTSB-210ENST00000526195 ABCA9Q8IUA7 1624 aa26.17■■□□□ 1.78
CTSB-210ENST00000526195 PCF11O94913 1555 aaKnown RBP26.09■■□□□ 1.77
CTSB-210ENST00000526195 CASKIN1Q8WXD9 1431 aa26.09■■□□□ 1.77
CTSB-210ENST00000526195 LOC105371045A0A1W2PR82 267 aa26.08■■□□□ 1.77
CTSB-210ENST00000526195 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.06■■□□□ 1.765e-6■□□□□ 9.5
CTSB-210ENST00000526195 LRRIQ1Q96JM4 1722 aa26.05■■□□□ 1.76
CTSB-210ENST00000526195 CEP162Q5TB80 1403 aa26.05■■□□□ 1.76
CTSB-210ENST00000526195 CDK11AQ9UQ88 783 aaPredicted RBP26.03■■□□□ 1.76
CTSB-210ENST00000526195 TTC37Q6PGP7 1564 aa26.02■■□□□ 1.76
CTSB-210ENST00000526195 FYCO1Q9BQS8 1478 aa26■■□□□ 1.75
CTSB-210ENST00000526195 ARAP3Q8WWN8 1544 aa25.99■■□□□ 1.75
CTSB-210ENST00000526195 NEO1Q92859 1461 aa25.98■■□□□ 1.75
CTSB-210ENST00000526195 TROQ12816 1431 aaPredicted RBP25.98■■□□□ 1.75
CTSB-210ENST00000526195 CCDC18Q5T9S5 1454 aa25.98■■□□□ 1.75
CTSB-210ENST00000526195 PHLDB1Q86UU1 1377 aa25.97■■□□□ 1.75
CTSB-210ENST00000526195 KIF14Q15058 1648 aa25.94■■□□□ 1.74
CTSB-210ENST00000526195 FANCAO15360 1455 aa25.92■■□□□ 1.74
CTSB-210ENST00000526195 RAPGEF3O95398 923 aa25.92■■□□□ 1.74
CTSB-210ENST00000526195 PLCH2O75038 1416 aa25.9■■□□□ 1.74
CTSB-210ENST00000526195 AEBP2Q6ZN18 517 aaPredicted RBP25.9■■□□□ 1.74
CTSB-210ENST00000526195 AKNAQ7Z591 1439 aa25.89■■□□□ 1.74
CTSB-210ENST00000526195 KDM4FA0A1W2PPD8 638 aa25.87■■□□□ 1.73
CTSB-210ENST00000526195 FRMPD1Q5SYB0 1578 aa25.83■■□□□ 1.73
CTSB-210ENST00000526195 CFAP74Q9C0B2 1584 aa25.83■■□□□ 1.73
CTSB-210ENST00000526195 DENND4BO75064 1496 aaPredicted RBP25.82■■□□□ 1.72
CTSB-210ENST00000526195 MYO5CQ9NQX4 1742 aa25.81■■□□□ 1.72
CTSB-210ENST00000526195 EFCAB2Q5VUJ9 269 aa25.8■■□□□ 1.72
CTSB-210ENST00000526195 ADGRL1O94910 1474 aa25.79■■□□□ 1.72
CTSB-210ENST00000526195 SCAPERQ9BY12 1400 aa25.76■■□□□ 1.71
CTSB-210ENST00000526195 ARHGAP5Q13017 1502 aa25.76■■□□□ 1.71
CTSB-210ENST00000526195 RICTORQ6R327 1708 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms