RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
VPS26B-203ENST00000525918 KIF13AQ9H1H9 1805 aa18.84■□□□□ 0.61
VPS26B-203ENST00000525918 CUL7Q14999 1698 aa18.79■□□□□ 0.6
VPS26B-203ENST00000525918 KIF27Q86VH2 1401 aa18.77■□□□□ 0.6
VPS26B-203ENST00000525918 IGF1RP08069 1367 aa18.77■□□□□ 0.6
VPS26B-203ENST00000525918 KIAA0586Q9BVV6 1533 aa18.76■□□□□ 0.59
VPS26B-203ENST00000525918 NPM1P06748 294 aaKnown RBP eCLIP18.76■□□□□ 0.59
VPS26B-203ENST00000525918 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.59
VPS26B-203ENST00000525918 MAPKBP1O60336 1514 aa18.71■□□□□ 0.59
VPS26B-203ENST00000525918 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
VPS26B-203ENST00000525918 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
VPS26B-203ENST00000525918 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
VPS26B-203ENST00000525918 DIP2BQ9P265 1576 aa18.65■□□□□ 0.58
VPS26B-203ENST00000525918 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
VPS26B-203ENST00000525918 PTPRGP23470 1445 aa18.6■□□□□ 0.57
VPS26B-203ENST00000525918 CARMIL2Q6F5E8 1435 aa18.58■□□□□ 0.57
VPS26B-203ENST00000525918 TSPOAP1O95153 1857 aa18.58■□□□□ 0.56
VPS26B-203ENST00000525918 IQGAP2Q13576 1575 aa18.57■□□□□ 0.56
VPS26B-203ENST00000525918 TNIKQ9UKE5 1360 aa18.55■□□□□ 0.56
VPS26B-203ENST00000525918 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
VPS26B-203ENST00000525918 KDM6BO15054 1643 aa18.53■□□□□ 0.56
VPS26B-203ENST00000525918 ABCC2Q92887 1545 aa18.52■□□□□ 0.56
VPS26B-203ENST00000525918 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
VPS26B-203ENST00000525918 RAPGEF2Q9Y4G8 1499 aa18.47■□□□□ 0.55
VPS26B-203ENST00000525918 DISP1Q96F81 1524 aa18.47■□□□□ 0.55
VPS26B-203ENST00000525918 PLB1Q6P1J6 1458 aa18.46■□□□□ 0.55
VPS26B-203ENST00000525918 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
VPS26B-203ENST00000525918 UACAQ9BZF9 1416 aa18.45■□□□□ 0.54
VPS26B-203ENST00000525918 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
VPS26B-203ENST00000525918 GLI2P10070 1586 aa18.44■□□□□ 0.54
VPS26B-203ENST00000525918 PPRC1Q5VV67 1664 aaKnown RBP18.41■□□□□ 0.54
VPS26B-203ENST00000525918 KDM5BQ9UGL1 1544 aa18.39■□□□□ 0.54
VPS26B-203ENST00000525918 KIAA0556O60303 1618 aa18.39■□□□□ 0.53
VPS26B-203ENST00000525918 CTTNBP2Q8WZ74 1663 aa18.38■□□□□ 0.53
VPS26B-203ENST00000525918 KDM4FA0A1W2PPD8 638 aa18.37■□□□□ 0.53
VPS26B-203ENST00000525918 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
VPS26B-203ENST00000525918 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
VPS26B-203ENST00000525918 EPRSP07814 1512 aaKnown RBP18.34■□□□□ 0.53
VPS26B-203ENST00000525918 PHF23Q9BUL5 403 aaPredicted RBP18.33■□□□□ 0.52
VPS26B-203ENST00000525918 GOLGA3Q08378 1498 aa18.29■□□□□ 0.52
VPS26B-203ENST00000525918 TEX14Q8IWB6 1497 aa18.29■□□□□ 0.52
VPS26B-203ENST00000525918 COL17A1Q9UMD9 1497 aaPredicted RBP18.26■□□□□ 0.51
VPS26B-203ENST00000525918 WDR7Q9Y4E6 1490 aa18.26■□□□□ 0.51
VPS26B-203ENST00000525918 PRXQ9BXM0 1461 aa18.25■□□□□ 0.51
VPS26B-203ENST00000525918 ABCA8O94911 1581 aa18.23■□□□□ 0.51
VPS26B-203ENST00000525918 CFAP43Q8NDM7 1665 aa18.21■□□□□ 0.51
VPS26B-203ENST00000525918 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
VPS26B-203ENST00000525918 FAM9AQ8IZU1 332 aaPredicted RBP18.18■□□□□ 0.5
VPS26B-203ENST00000525918 CD109Q6YHK3 1445 aa18.17■□□□□ 0.5
VPS26B-203ENST00000525918 KCNH8Q96L42 1107 aa18.17■□□□□ 0.5
VPS26B-203ENST00000525918 MAGI3Q5TCQ9 1506 aa18.16■□□□□ 0.5
VPS26B-203ENST00000525918 P3H3Q8IVL6 736 aa18.1■□□□□ 0.49
VPS26B-203ENST00000525918 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
VPS26B-203ENST00000525918 ATP10BO94823 1461 aa18.08■□□□□ 0.49
VPS26B-203ENST00000525918 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
VPS26B-203ENST00000525918 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
VPS26B-203ENST00000525918 RAPGEF6Q8TEU7 1601 aa18.04■□□□□ 0.48
VPS26B-203ENST00000525918 ARAP3Q8WWN8 1544 aa18.03■□□□□ 0.48
VPS26B-203ENST00000525918 ABCA9Q8IUA7 1624 aa18.03■□□□□ 0.48
VPS26B-203ENST00000525918 EEA1Q15075 1411 aa18■□□□□ 0.47
VPS26B-203ENST00000525918 KIF21BO75037 1637 aa18■□□□□ 0.47
VPS26B-203ENST00000525918 PHLDB1Q86UU1 1377 aa18■□□□□ 0.47
VPS26B-203ENST00000525918 HECW2Q9P2P5 1572 aa17.99■□□□□ 0.47
VPS26B-203ENST00000525918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
VPS26B-203ENST00000525918 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
VPS26B-203ENST00000525918 NEO1Q92859 1461 aa17.95■□□□□ 0.46
VPS26B-203ENST00000525918 NUP153P49790 1475 aaKnown RBP17.94■□□□□ 0.46
VPS26B-203ENST00000525918 RANGAP1P46060 587 aaPredicted RBP17.93■□□□□ 0.46
VPS26B-203ENST00000525918 ILDR1Q86SU0 546 aaPredicted RBP17.91■□□□□ 0.46
VPS26B-203ENST00000525918 FHOD3Q2V2M9 1422 aa17.9■□□□□ 0.46
VPS26B-203ENST00000525918 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
VPS26B-203ENST00000525918 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
VPS26B-203ENST00000525918 ADAMTSL3P82987 1691 aa17.87■□□□□ 0.45
VPS26B-203ENST00000525918 EFCAB5A4FU69 1503 aa17.87■□□□□ 0.45
VPS26B-203ENST00000525918 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
VPS26B-203ENST00000525918 CFAP74Q9C0B2 1584 aa17.83■□□□□ 0.44
VPS26B-203ENST00000525918 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
VPS26B-203ENST00000525918 RICTORQ6R327 1708 aa17.82■□□□□ 0.44
VPS26B-203ENST00000525918 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
VPS26B-203ENST00000525918 PTPRMP28827 1452 aa17.82■□□□□ 0.44
VPS26B-203ENST00000525918 FANCAO15360 1455 aa17.8■□□□□ 0.44
VPS26B-203ENST00000525918 DENND4BO75064 1496 aaPredicted RBP17.8■□□□□ 0.44
VPS26B-203ENST00000525918 AKNAQ7Z591 1439 aa17.8■□□□□ 0.44
VPS26B-203ENST00000525918 ARID4BQ4LE39 1312 aaPredicted RBP17.79■□□□□ 0.44
VPS26B-203ENST00000525918 TTC37Q6PGP7 1564 aa17.78■□□□□ 0.44
VPS26B-203ENST00000525918 ARHGEF40Q8TER5 1519 aa17.77■□□□□ 0.43
VPS26B-203ENST00000525918 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
VPS26B-203ENST00000525918 CDK13Q14004 1512 aaKnown RBP17.74■□□□□ 0.43
VPS26B-203ENST00000525918 UBTFP17480 764 aaKnown RBP17.74■□□□□ 0.43
VPS26B-203ENST00000525918 ZMYM4Q5VZL5 1548 aa17.72■□□□□ 0.43
VPS26B-203ENST00000525918 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
VPS26B-203ENST00000525918 RIMS1Q86UR5 1692 aaKnown RBP17.71■□□□□ 0.43
VPS26B-203ENST00000525918 HECW1Q76N89 1606 aa17.71■□□□□ 0.43
VPS26B-203ENST00000525918 MAGI2Q86UL8 1455 aa17.7■□□□□ 0.42
VPS26B-203ENST00000525918 PLCH2O75038 1416 aa17.7■□□□□ 0.42
VPS26B-203ENST00000525918 ZFYVE16Q7Z3T8 1539 aa17.69■□□□□ 0.42
VPS26B-203ENST00000525918 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
VPS26B-203ENST00000525918 ATP1B4Q9UN42 357 aaPredicted RBP17.69■□□□□ 0.42
VPS26B-203ENST00000525918 POGZQ7Z3K3 1410 aa17.69■□□□□ 0.42
VPS26B-203ENST00000525918 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms