RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 NISCHQ9Y2I1 1504 aa26.91■■□□□ 1.9
VPS26B-203ENST00000525918 ABCC9O60706 1549 aa24.24■■□□□ 1.47
VPS26B-203ENST00000525918 CCDC180Q9P1Z9 1646 aa24.23■■□□□ 1.47
VPS26B-203ENST00000525918 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
VPS26B-203ENST00000525918 NACADO15069 1562 aa22.91■■□□□ 1.26
VPS26B-203ENST00000525918 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
VPS26B-203ENST00000525918 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
VPS26B-203ENST00000525918 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
VPS26B-203ENST00000525918 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
VPS26B-203ENST00000525918 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
VPS26B-203ENST00000525918 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.18
VPS26B-203ENST00000525918 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.16
VPS26B-203ENST00000525918 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
VPS26B-203ENST00000525918 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
VPS26B-203ENST00000525918 SCRIBQ14160 1630 aa22.02■■□□□ 1.11
VPS26B-203ENST00000525918 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
VPS26B-203ENST00000525918 CECR2Q9BXF3 1484 aa21.85■■□□□ 1.09
VPS26B-203ENST00000525918 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
VPS26B-203ENST00000525918 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
VPS26B-203ENST00000525918 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
VPS26B-203ENST00000525918 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
VPS26B-203ENST00000525918 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
VPS26B-203ENST00000525918 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
VPS26B-203ENST00000525918 SMARCA2P51531 1590 aa21■□□□□ 0.95
VPS26B-203ENST00000525918 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
VPS26B-203ENST00000525918 CUX2O14529 1486 aa20.95■□□□□ 0.94
VPS26B-203ENST00000525918 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
VPS26B-203ENST00000525918 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
VPS26B-203ENST00000525918 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
VPS26B-203ENST00000525918 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.92
VPS26B-203ENST00000525918 NESP48681 1621 aa20.8■□□□□ 0.92
VPS26B-203ENST00000525918 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
VPS26B-203ENST00000525918 LAMC3Q9Y6N6 1575 aa20.69■□□□□ 0.9
VPS26B-203ENST00000525918 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
VPS26B-203ENST00000525918 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.89
VPS26B-203ENST00000525918 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
VPS26B-203ENST00000525918 WIZO95785 1651 aa20.5■□□□□ 0.87
VPS26B-203ENST00000525918 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
VPS26B-203ENST00000525918 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
VPS26B-203ENST00000525918 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
VPS26B-203ENST00000525918 WDR62O43379 1518 aa20.32■□□□□ 0.84
VPS26B-203ENST00000525918 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
VPS26B-203ENST00000525918 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
VPS26B-203ENST00000525918 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
VPS26B-203ENST00000525918 CFTRP13569 1480 aa20.23■□□□□ 0.83
VPS26B-203ENST00000525918 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
VPS26B-203ENST00000525918 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
VPS26B-203ENST00000525918 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
VPS26B-203ENST00000525918 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
VPS26B-203ENST00000525918 OSCARQ8IYS5 282 aa20■□□□□ 0.79
VPS26B-203ENST00000525918 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
VPS26B-203ENST00000525918 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
VPS26B-203ENST00000525918 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
VPS26B-203ENST00000525918 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
VPS26B-203ENST00000525918 ZNF608Q9ULD9 1512 aaPredicted RBP19.83■□□□□ 0.77
VPS26B-203ENST00000525918 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
VPS26B-203ENST00000525918 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
VPS26B-203ENST00000525918 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
VPS26B-203ENST00000525918 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
VPS26B-203ENST00000525918 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
VPS26B-203ENST00000525918 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
VPS26B-203ENST00000525918 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.74
VPS26B-203ENST00000525918 ARHGEF11O15085 1522 aa19.65■□□□□ 0.74
VPS26B-203ENST00000525918 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.73
VPS26B-203ENST00000525918 CHD1O14646 1710 aa19.64■□□□□ 0.73
VPS26B-203ENST00000525918 SOGA1O94964 1423 aa19.56■□□□□ 0.72
VPS26B-203ENST00000525918 RAD54L2Q9Y4B4 1467 aa19.55■□□□□ 0.72
VPS26B-203ENST00000525918 FBLN2P98095 1184 aa19.55■□□□□ 0.72
VPS26B-203ENST00000525918 CYB5RLQ6IPT4 315 aa19.52■□□□□ 0.72
VPS26B-203ENST00000525918 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
VPS26B-203ENST00000525918 TDRD9Q8NDG6 1382 aaKnown RBP19.51■□□□□ 0.71
VPS26B-203ENST00000525918 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
VPS26B-203ENST00000525918 CUX1P39880 1505 aa19.47■□□□□ 0.71
VPS26B-203ENST00000525918 SNAPC4Q5SXM2 1469 aa19.44■□□□□ 0.7
VPS26B-203ENST00000525918 ARAP1Q96P48 1450 aa19.43■□□□□ 0.7
VPS26B-203ENST00000525918 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
VPS26B-203ENST00000525918 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
VPS26B-203ENST00000525918 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
VPS26B-203ENST00000525918 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
VPS26B-203ENST00000525918 CLASP1Q7Z460 1538 aa19.38■□□□□ 0.69
VPS26B-203ENST00000525918 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
VPS26B-203ENST00000525918 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
VPS26B-203ENST00000525918 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
VPS26B-203ENST00000525918 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
VPS26B-203ENST00000525918 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
VPS26B-203ENST00000525918 ABCA10Q8WWZ4 1543 aa19.29■□□□□ 0.68
VPS26B-203ENST00000525918 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
VPS26B-203ENST00000525918 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
VPS26B-203ENST00000525918 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
VPS26B-203ENST00000525918 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
VPS26B-203ENST00000525918 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
VPS26B-203ENST00000525918 ADAMTS12P58397 1594 aa19.11■□□□□ 0.65
VPS26B-203ENST00000525918 CEP170Q5SW79 1584 aa19.08■□□□□ 0.65
VPS26B-203ENST00000525918 NUP160Q12769 1436 aa19.08■□□□□ 0.64
VPS26B-203ENST00000525918 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
VPS26B-203ENST00000525918 ERCC6L2Q5T890 1561 aa19.06■□□□□ 0.64
VPS26B-203ENST00000525918 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
VPS26B-203ENST00000525918 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
VPS26B-203ENST00000525918 PRG4Q92954 1404 aaPredicted RBP18.91■□□□□ 0.62
VPS26B-203ENST00000525918 JPH4Q96JJ6 628 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms