RNA–Protein interactions for RNA: ENST00000525687.5

CNKSR1-210, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 1,200 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-210ENST00000525687 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
CNKSR1-210ENST00000525687 CUL7Q14999 1698 aa23.59■■□□□ 1.37
CNKSR1-210ENST00000525687 KIAA0586Q9BVV6 1533 aa23.54■■□□□ 1.36
CNKSR1-210ENST00000525687 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
CNKSR1-210ENST00000525687 NPM1P06748 294 aaKnown RBP eCLIP23.41■■□□□ 1.34
CNKSR1-210ENST00000525687 ADCY10Q96PN6 1610 aa23.41■■□□□ 1.34
CNKSR1-210ENST00000525687 KIF13AQ9H1H9 1805 aa23.4■■□□□ 1.34
CNKSR1-210ENST00000525687 TTBK1Q5TCY1 1321 aaPredicted RBP23.37■■□□□ 1.33
CNKSR1-210ENST00000525687 PTPRGP23470 1445 aa23.33■■□□□ 1.33
CNKSR1-210ENST00000525687 IQGAP2Q13576 1575 aa23.33■■□□□ 1.33
CNKSR1-210ENST00000525687 FAM69CQ0P6D2 419 aa23.33■■□□□ 1.33
CNKSR1-210ENST00000525687 MAPKBP1O60336 1514 aa23.33■■□□□ 1.32
CNKSR1-210ENST00000525687 ABCC10Q5T3U5 1492 aa23.31■■□□□ 1.32
CNKSR1-210ENST00000525687 CARMIL2Q6F5E8 1435 aa23.31■■□□□ 1.32
CNKSR1-210ENST00000525687 RAPGEF2Q9Y4G8 1499 aa23.3■■□□□ 1.32
CNKSR1-210ENST00000525687 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
CNKSR1-210ENST00000525687 DIP2BQ9P265 1576 aa23.26■■□□□ 1.31
CNKSR1-210ENST00000525687 DISP1Q96F81 1524 aa23.23■■□□□ 1.31
CNKSR1-210ENST00000525687 AEBP2Q6ZN18 517 aaPredicted RBP23.21■■□□□ 1.31
CNKSR1-210ENST00000525687 ABCC2Q92887 1545 aa23.18■■□□□ 1.3
CNKSR1-210ENST00000525687 UGGT2Q9NYU1 1516 aa23.18■■□□□ 1.3
CNKSR1-210ENST00000525687 UACAQ9BZF9 1416 aa23.15■■□□□ 1.3
CNKSR1-210ENST00000525687 TSPOAP1O95153 1857 aa23.13■■□□□ 1.29
CNKSR1-210ENST00000525687 UHRF1BP1LA0JNW5 1464 aa23.13■■□□□ 1.29
CNKSR1-210ENST00000525687 KIAA0556O60303 1618 aa23.13■■□□□ 1.29
CNKSR1-210ENST00000525687 ASXL2Q76L83 1435 aa23.11■■□□□ 1.29
CNKSR1-210ENST00000525687 CTTNBP2Q8WZ74 1663 aa23.09■■□□□ 1.29
CNKSR1-210ENST00000525687 PLB1Q6P1J6 1458 aa23.07■■□□□ 1.28
CNKSR1-210ENST00000525687 PRXQ9BXM0 1461 aa23.07■■□□□ 1.28
CNKSR1-210ENST00000525687 KDM6BO15054 1643 aa23.04■■□□□ 1.28
CNKSR1-210ENST00000525687 KDM5BQ9UGL1 1544 aa23.03■■□□□ 1.28
CNKSR1-210ENST00000525687 ZCCHC11Q5TAX3 1644 aaKnown RBP23■■□□□ 1.27
CNKSR1-210ENST00000525687 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
CNKSR1-210ENST00000525687 GLI2P10070 1586 aa22.99■■□□□ 1.27
CNKSR1-210ENST00000525687 EPRSP07814 1512 aaKnown RBP22.96■■□□□ 1.27
CNKSR1-210ENST00000525687 PPRC1Q5VV67 1664 aaKnown RBP22.95■■□□□ 1.26
CNKSR1-210ENST00000525687 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
CNKSR1-210ENST00000525687 ABCA8O94911 1581 aa22.9■■□□□ 1.26
CNKSR1-210ENST00000525687 P3H3Q8IVL6 736 aa22.9■■□□□ 1.26
CNKSR1-210ENST00000525687 MAP3K4Q9Y6R4 1608 aa22.89■■□□□ 1.25
CNKSR1-210ENST00000525687 WDR7Q9Y4E6 1490 aa22.88■■□□□ 1.25
CNKSR1-210ENST00000525687 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.25
CNKSR1-210ENST00000525687 KCNH8Q96L42 1107 aa22.83■■□□□ 1.25
CNKSR1-210ENST00000525687 COL17A1Q9UMD9 1497 aaPredicted RBP22.82■■□□□ 1.24
CNKSR1-210ENST00000525687 ARID3CA6NKF2 412 aa22.82■■□□□ 1.24
CNKSR1-210ENST00000525687 EEA1Q15075 1411 aa22.82■■□□□ 1.24
CNKSR1-210ENST00000525687 TEX14Q8IWB6 1497 aa22.81■■□□□ 1.24
CNKSR1-210ENST00000525687 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
CNKSR1-210ENST00000525687 RANGAP1P46060 587 aaPredicted RBP22.78■■□□□ 1.24
CNKSR1-210ENST00000525687 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
CNKSR1-210ENST00000525687 CD109Q6YHK3 1445 aa22.75■■□□□ 1.23
CNKSR1-210ENST00000525687 ATP10BO94823 1461 aa22.73■■□□□ 1.23
CNKSR1-210ENST00000525687 CFAP43Q8NDM7 1665 aa22.72■■□□□ 1.23
CNKSR1-210ENST00000525687 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
CNKSR1-210ENST00000525687 RAPGEF6Q8TEU7 1601 aa22.68■■□□□ 1.22
CNKSR1-210ENST00000525687 FHOD3Q2V2M9 1422 aa22.66■■□□□ 1.22
CNKSR1-210ENST00000525687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.65■■□□□ 1.22
CNKSR1-210ENST00000525687 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
CNKSR1-210ENST00000525687 ADGRL1O94910 1474 aa22.64■■□□□ 1.21
CNKSR1-210ENST00000525687 KIF21BO75037 1637 aa22.64■■□□□ 1.21
CNKSR1-210ENST00000525687 EHMT2Q96KQ7 1210 aa22.63■■□□□ 1.21
CNKSR1-210ENST00000525687 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
CNKSR1-210ENST00000525687 NUP153P49790 1475 aaKnown RBP22.6■■□□□ 1.21
CNKSR1-210ENST00000525687 ABCA9Q8IUA7 1624 aa22.57■■□□□ 1.2
CNKSR1-210ENST00000525687 EFCAB5A4FU69 1503 aa22.54■■□□□ 1.2
CNKSR1-210ENST00000525687 UBTFP17480 764 aaKnown RBP22.53■■□□□ 1.2
CNKSR1-210ENST00000525687 ARAP3Q8WWN8 1544 aa22.52■■□□□ 1.19
CNKSR1-210ENST00000525687 PLEKHD1A6NEE1 506 aa22.49■■□□□ 1.19
CNKSR1-210ENST00000525687 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
CNKSR1-210ENST00000525687 RAPGEF3O95398 923 aa22.45■■□□□ 1.18
CNKSR1-210ENST00000525687 NEO1Q92859 1461 aa22.44■■□□□ 1.18
CNKSR1-210ENST00000525687 CDK13Q14004 1512 aaKnown RBP22.41■■□□□ 1.18
CNKSR1-210ENST00000525687 ATP1B4Q9UN42 357 aaPredicted RBP22.41■■□□□ 1.18
CNKSR1-210ENST00000525687 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
CNKSR1-210ENST00000525687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.39■■□□□ 1.17
CNKSR1-210ENST00000525687 FMN1Q68DA7 1419 aa22.36■■□□□ 1.17
CNKSR1-210ENST00000525687 FRMPD1Q5SYB0 1578 aa22.36■■□□□ 1.17
CNKSR1-210ENST00000525687 TTC37Q6PGP7 1564 aa22.35■■□□□ 1.17
CNKSR1-210ENST00000525687 FANCAO15360 1455 aa22.34■■□□□ 1.17
CNKSR1-210ENST00000525687 AKNAQ7Z591 1439 aa22.33■■□□□ 1.17
CNKSR1-210ENST00000525687 HECW1Q76N89 1606 aa22.32■■□□□ 1.16
CNKSR1-210ENST00000525687 DENND4BO75064 1496 aaPredicted RBP22.31■■□□□ 1.16
CNKSR1-210ENST00000525687 HECW2Q9P2P5 1572 aa22.29■■□□□ 1.16
CNKSR1-210ENST00000525687 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
CNKSR1-210ENST00000525687 RICTORQ6R327 1708 aa22.27■■□□□ 1.16
CNKSR1-210ENST00000525687 ARID4BQ4LE39 1312 aaPredicted RBP22.27■■□□□ 1.16
CNKSR1-210ENST00000525687 CDK11AQ9UQ88 783 aaPredicted RBP22.24■■□□□ 1.15
CNKSR1-210ENST00000525687 ADAMTSL3P82987 1691 aa22.23■■□□□ 1.15
CNKSR1-210ENST00000525687 PLCH2O75038 1416 aa22.23■■□□□ 1.15
CNKSR1-210ENST00000525687 ARHGEF40Q8TER5 1519 aa22.22■■□□□ 1.15
CNKSR1-210ENST00000525687 BCORL1Q5H9F3 1711 aa22.2■■□□□ 1.14
CNKSR1-210ENST00000525687 SCAPERQ9BY12 1400 aa22.2■■□□□ 1.14
CNKSR1-210ENST00000525687 KIF14Q15058 1648 aa22.2■■□□□ 1.14
CNKSR1-210ENST00000525687 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
CNKSR1-210ENST00000525687 TROQ12816 1431 aaPredicted RBP22.19■■□□□ 1.14
CNKSR1-210ENST00000525687 PTPRMP28827 1452 aa22.19■■□□□ 1.14
CNKSR1-210ENST00000525687 MYO5CQ9NQX4 1742 aa22.17■■□□□ 1.14
CNKSR1-210ENST00000525687 ZMYM4Q5VZL5 1548 aa22.17■■□□□ 1.14
CNKSR1-210ENST00000525687 YEATS2Q9ULM3 1422 aa22.17■■□□□ 1.14
CNKSR1-210ENST00000525687 EFCAB2Q5VUJ9 269 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms