RNA–Protein interactions for RNA: ENST00000525687.5

CNKSR1-210, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 1,200 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-210ENST00000525687 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
CNKSR1-210ENST00000525687 CCDC180Q9P1Z9 1646 aa30.28■■■□□ 2.44
CNKSR1-210ENST00000525687 ABCC9O60706 1549 aa30.27■■■□□ 2.44
CNKSR1-210ENST00000525687 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
CNKSR1-210ENST00000525687 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
CNKSR1-210ENST00000525687 NACADO15069 1562 aa28.62■■■□□ 2.17
CNKSR1-210ENST00000525687 DNAJC5BQ9UF47 199 aa28.32■■■□□ 2.12
CNKSR1-210ENST00000525687 PABPN1Q86U42 306 aaKnown RBP eCLIP28.23■■■□□ 2.11
CNKSR1-210ENST00000525687 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
CNKSR1-210ENST00000525687 UNC13AQ9UPW8 1703 aa28.16■■■□□ 2.1
CNKSR1-210ENST00000525687 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
CNKSR1-210ENST00000525687 BICRAQ9NZM4 1560 aa27.97■■■□□ 2.07
CNKSR1-210ENST00000525687 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
CNKSR1-210ENST00000525687 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
CNKSR1-210ENST00000525687 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
CNKSR1-210ENST00000525687 CC2D2AQ9P2K1 1620 aa27.32■■□□□ 1.96
CNKSR1-210ENST00000525687 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
CNKSR1-210ENST00000525687 CECR2Q9BXF3 1484 aa27.23■■□□□ 1.95
CNKSR1-210ENST00000525687 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
CNKSR1-210ENST00000525687 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
CNKSR1-210ENST00000525687 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
CNKSR1-210ENST00000525687 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
CNKSR1-210ENST00000525687 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
CNKSR1-210ENST00000525687 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
CNKSR1-210ENST00000525687 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.78
CNKSR1-210ENST00000525687 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
CNKSR1-210ENST00000525687 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
CNKSR1-210ENST00000525687 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
CNKSR1-210ENST00000525687 NESP48681 1621 aa26.04■■□□□ 1.76
CNKSR1-210ENST00000525687 CUX2O14529 1486 aa25.98■■□□□ 1.75
CNKSR1-210ENST00000525687 DNAJC5Q9H3Z4 198 aa25.88■■□□□ 1.73
CNKSR1-210ENST00000525687 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
CNKSR1-210ENST00000525687 WIZO95785 1651 aa25.8■■□□□ 1.72
CNKSR1-210ENST00000525687 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
CNKSR1-210ENST00000525687 PDS5BQ9NTI5 1447 aa25.68■■□□□ 1.7
CNKSR1-210ENST00000525687 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
CNKSR1-210ENST00000525687 CADPSQ9ULU8 1353 aa25.65■■□□□ 1.7
CNKSR1-210ENST00000525687 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
CNKSR1-210ENST00000525687 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
CNKSR1-210ENST00000525687 TOP2AP11388 1531 aaKnown RBP25.45■■□□□ 1.66
CNKSR1-210ENST00000525687 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
CNKSR1-210ENST00000525687 WDR62O43379 1518 aa25.37■■□□□ 1.65
CNKSR1-210ENST00000525687 CFTRP13569 1480 aa25.37■■□□□ 1.65
CNKSR1-210ENST00000525687 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
CNKSR1-210ENST00000525687 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
CNKSR1-210ENST00000525687 URB2Q14146 1524 aaKnown RBP25.16■■□□□ 1.62
CNKSR1-210ENST00000525687 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
CNKSR1-210ENST00000525687 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
CNKSR1-210ENST00000525687 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
CNKSR1-210ENST00000525687 IFT140Q96RY7 1462 aa24.85■■□□□ 1.57
CNKSR1-210ENST00000525687 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
CNKSR1-210ENST00000525687 ZNF608Q9ULD9 1512 aaPredicted RBP24.85■■□□□ 1.57
CNKSR1-210ENST00000525687 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
CNKSR1-210ENST00000525687 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
CNKSR1-210ENST00000525687 EIF4G3O43432 1585 aaKnown RBP24.68■■□□□ 1.54
CNKSR1-210ENST00000525687 POLA1P09884 1462 aaPredicted RBP24.65■■□□□ 1.54
CNKSR1-210ENST00000525687 TARBP1Q13395 1621 aaKnown RBP24.65■■□□□ 1.54
CNKSR1-210ENST00000525687 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.53
CNKSR1-210ENST00000525687 SUPT5HO00267 1087 aaKnown RBP24.62■■□□□ 1.53
CNKSR1-210ENST00000525687 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
CNKSR1-210ENST00000525687 SOGA1O94964 1423 aa24.55■■□□□ 1.52
CNKSR1-210ENST00000525687 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
CNKSR1-210ENST00000525687 CUX1P39880 1505 aa24.52■■□□□ 1.52
CNKSR1-210ENST00000525687 RIMBP3CA6NJZ7 1639 aa24.51■■□□□ 1.51
CNKSR1-210ENST00000525687 RIMBP3BA6NNM3 1639 aa24.51■■□□□ 1.51
CNKSR1-210ENST00000525687 RIMBP3Q9UFD9 1639 aa24.51■■□□□ 1.51
CNKSR1-210ENST00000525687 TDRD9Q8NDG6 1382 aaKnown RBP24.51■■□□□ 1.51
CNKSR1-210ENST00000525687 FBLN2P98095 1184 aa24.49■■□□□ 1.51
CNKSR1-210ENST00000525687 CHD1O14646 1710 aa24.49■■□□□ 1.51
CNKSR1-210ENST00000525687 ARHGEF11O15085 1522 aa24.45■■□□□ 1.5
CNKSR1-210ENST00000525687 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
CNKSR1-210ENST00000525687 WDR97A6NE52 1622 aa24.36■■□□□ 1.49
CNKSR1-210ENST00000525687 GRIN2BQ13224 1484 aa24.31■■□□□ 1.48
CNKSR1-210ENST00000525687 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
CNKSR1-210ENST00000525687 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
CNKSR1-210ENST00000525687 MAGI1Q96QZ7 1491 aaPredicted RBP24.28■■□□□ 1.48
CNKSR1-210ENST00000525687 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
CNKSR1-210ENST00000525687 ARAP1Q96P48 1450 aa24.23■■□□□ 1.47
CNKSR1-210ENST00000525687 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
CNKSR1-210ENST00000525687 PBRM1Q86U86 1689 aa24.22■■□□□ 1.47
CNKSR1-210ENST00000525687 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
CNKSR1-210ENST00000525687 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.46
CNKSR1-210ENST00000525687 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
CNKSR1-210ENST00000525687 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
CNKSR1-210ENST00000525687 WRNQ14191 1432 aaPredicted RBP eCLIP24.16■■□□□ 1.46
CNKSR1-210ENST00000525687 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
CNKSR1-210ENST00000525687 BIVM-ERCC5R4GMW8 1640 aa24.12■■□□□ 1.45
CNKSR1-210ENST00000525687 TRHP20396 242 aaPredicted RBP24.01■■□□□ 1.43
CNKSR1-210ENST00000525687 GRIN2AQ12879 1464 aa24■■□□□ 1.43
CNKSR1-210ENST00000525687 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
CNKSR1-210ENST00000525687 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
CNKSR1-210ENST00000525687 CEP170Q5SW79 1584 aa23.92■■□□□ 1.42
CNKSR1-210ENST00000525687 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
CNKSR1-210ENST00000525687 NUP160Q12769 1436 aa23.91■■□□□ 1.42
CNKSR1-210ENST00000525687 ERCC6L2Q5T890 1561 aa23.87■■□□□ 1.41
CNKSR1-210ENST00000525687 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
CNKSR1-210ENST00000525687 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
CNKSR1-210ENST00000525687 PRG4Q92954 1404 aaPredicted RBP23.69■■□□□ 1.38
CNKSR1-210ENST00000525687 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
CNKSR1-210ENST00000525687 IGF1RP08069 1367 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms