RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 KIAA0586Q9BVV6 1533 aa29.68■■■□□ 2.34
TSPAN4-214ENST00000525201 JPH4Q96JJ6 628 aa29.68■■■□□ 2.34
TSPAN4-214ENST00000525201 PRG4Q92954 1404 aaPredicted RBP29.68■■■□□ 2.34
TSPAN4-214ENST00000525201 TRHP20396 242 aaPredicted RBP29.63■■■□□ 2.33
TSPAN4-214ENST00000525201 RAPGEF2Q9Y4G8 1499 aa29.51■■■□□ 2.31
TSPAN4-214ENST00000525201 IQGAP2Q13576 1575 aa29.47■■■□□ 2.31
TSPAN4-214ENST00000525201 CARMIL2Q6F5E8 1435 aa29.44■■■□□ 2.3
TSPAN4-214ENST00000525201 NPM1P06748 294 aaKnown RBP eCLIP29.35■■■□□ 2.29
TSPAN4-214ENST00000525201 TNIKQ9UKE5 1360 aa29.3■■■□□ 2.28
TSPAN4-214ENST00000525201 PTPRGP23470 1445 aa29.29■■■□□ 2.28
TSPAN4-214ENST00000525201 UGGT2Q9NYU1 1516 aa29.28■■■□□ 2.28
TSPAN4-214ENST00000525201 PRXQ9BXM0 1461 aa29.28■■■□□ 2.28
TSPAN4-214ENST00000525201 CTTNBP2Q8WZ74 1663 aa29.28■■■□□ 2.28
TSPAN4-214ENST00000525201 EEA1Q15075 1411 aa29.27■■■□□ 2.28
TSPAN4-214ENST00000525201 ADCY10Q96PN6 1610 aa29.27■■■□□ 2.28
TSPAN4-214ENST00000525201 MAPKBP1O60336 1514 aa29.25■■■□□ 2.27
TSPAN4-214ENST00000525201 DISP1Q96F81 1524 aa29.2■■■□□ 2.27
TSPAN4-214ENST00000525201 GOLGA3Q08378 1498 aa29.18■■■□□ 2.26
TSPAN4-214ENST00000525201 KIAA0556O60303 1618 aa29.18■■■□□ 2.26
TSPAN4-214ENST00000525201 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
TSPAN4-214ENST00000525201 UHRF1BP1LA0JNW5 1464 aa29.12■■■□□ 2.25
TSPAN4-214ENST00000525201 TTBK1Q5TCY1 1321 aaPredicted RBP29.12■■■□□ 2.25
TSPAN4-214ENST00000525201 ABCC10Q5T3U5 1492 aa29.11■■■□□ 2.25
TSPAN4-214ENST00000525201 ABCC2Q92887 1545 aa29.11■■■□□ 2.25
TSPAN4-214ENST00000525201 UACAQ9BZF9 1416 aa29.11■■■□□ 2.25
TSPAN4-214ENST00000525201 KIF13AQ9H1H9 1805 aa29.1■■■□□ 2.25
TSPAN4-214ENST00000525201 DIP2BQ9P265 1576 aa29.05■■■□□ 2.24
TSPAN4-214ENST00000525201 FAM9AQ8IZU1 332 aaPredicted RBP29.03■■■□□ 2.24
TSPAN4-214ENST00000525201 FAM69CQ0P6D2 419 aa29.02■■■□□ 2.24
TSPAN4-214ENST00000525201 PLB1Q6P1J6 1458 aa28.98■■■□□ 2.23
TSPAN4-214ENST00000525201 KDM5BQ9UGL1 1544 aa28.95■■■□□ 2.23
TSPAN4-214ENST00000525201 ASXL2Q76L83 1435 aa28.93■■■□□ 2.22
TSPAN4-214ENST00000525201 KIF21BO75037 1637 aa28.92■■■□□ 2.22
TSPAN4-214ENST00000525201 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
TSPAN4-214ENST00000525201 ZCCHC11Q5TAX3 1644 aaKnown RBP28.88■■■□□ 2.21
TSPAN4-214ENST00000525201 ABCA8O94911 1581 aa28.85■■■□□ 2.21
TSPAN4-214ENST00000525201 GLI2P10070 1586 aa28.85■■■□□ 2.21
TSPAN4-214ENST00000525201 SAMD9Q5K651 1589 aa28.84■■■□□ 2.21
TSPAN4-214ENST00000525201 AEBP2Q6ZN18 517 aaPredicted RBP28.77■■■□□ 2.2
TSPAN4-214ENST00000525201 WDR7Q9Y4E6 1490 aa28.77■■■□□ 2.2
TSPAN4-214ENST00000525201 EPRSP07814 1512 aaKnown RBP28.75■■■□□ 2.19
TSPAN4-214ENST00000525201 TSPOAP1O95153 1857 aa28.74■■■□□ 2.19
TSPAN4-214ENST00000525201 EFCAB5A4FU69 1503 aa28.74■■■□□ 2.19
TSPAN4-214ENST00000525201 KDM6BO15054 1643 aa28.72■■■□□ 2.19
TSPAN4-214ENST00000525201 P3H3Q8IVL6 736 aa28.72■■■□□ 2.19
TSPAN4-214ENST00000525201 TEX14Q8IWB6 1497 aa28.68■■■□□ 2.18
TSPAN4-214ENST00000525201 MAP3K4Q9Y6R4 1608 aa28.68■■■□□ 2.18
TSPAN4-214ENST00000525201 RAPGEF6Q8TEU7 1601 aa28.66■■■□□ 2.18
TSPAN4-214ENST00000525201 UBTFP17480 764 aaKnown RBP28.63■■■□□ 2.17
TSPAN4-214ENST00000525201 RANGAP1P46060 587 aaPredicted RBP28.62■■■□□ 2.17
TSPAN4-214ENST00000525201 PPRC1Q5VV67 1664 aaKnown RBP28.61■■■□□ 2.17
TSPAN4-214ENST00000525201 FHOD3Q2V2M9 1422 aa28.6■■■□□ 2.17
TSPAN4-214ENST00000525201 CFAP43Q8NDM7 1665 aa28.58■■■□□ 2.17
TSPAN4-214ENST00000525201 ATP10BO94823 1461 aa28.57■■■□□ 2.16
TSPAN4-214ENST00000525201 CD109Q6YHK3 1445 aa28.52■■■□□ 2.16
TSPAN4-214ENST00000525201 KCNH8Q96L42 1107 aa28.51■■■□□ 2.15
TSPAN4-214ENST00000525201 MAGI3Q5TCQ9 1506 aa28.51■■■□□ 2.15
TSPAN4-214ENST00000525201 NUP153P49790 1475 aaKnown RBP28.5■■■□□ 2.15
TSPAN4-214ENST00000525201 ARID3CA6NKF2 412 aa28.49■■■□□ 2.15
TSPAN4-214ENST00000525201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.49■■■□□ 2.15
TSPAN4-214ENST00000525201 HNRNPUL2Q1KMD3 747 aaKnown RBP28.49■■■□□ 2.15
TSPAN4-214ENST00000525201 FMN1Q68DA7 1419 aa28.47■■■□□ 2.15
TSPAN4-214ENST00000525201 EHMT2Q96KQ7 1210 aa28.47■■■□□ 2.15
TSPAN4-214ENST00000525201 ABCA9Q8IUA7 1624 aa28.42■■■□□ 2.14
TSPAN4-214ENST00000525201 ARHGAP35Q9NRY4 1499 aa28.4■■■□□ 2.14
TSPAN4-214ENST00000525201 HECW1Q76N89 1606 aa28.38■■■□□ 2.13
TSPAN4-214ENST00000525201 PLEKHD1A6NEE1 506 aa28.37■■■□□ 2.13
TSPAN4-214ENST00000525201 PHLDB1Q86UU1 1377 aa28.36■■■□□ 2.13
TSPAN4-214ENST00000525201 COL17A1Q9UMD9 1497 aaPredicted RBP28.31■■■□□ 2.12
TSPAN4-214ENST00000525201 NEO1Q92859 1461 aa28.27■■■□□ 2.12
TSPAN4-214ENST00000525201 CDK11AQ9UQ88 783 aaPredicted RBP28.26■■■□□ 2.11
TSPAN4-214ENST00000525201 ARAP3Q8WWN8 1544 aa28.26■■■□□ 2.11
TSPAN4-214ENST00000525201 CDK13Q14004 1512 aaKnown RBP28.24■■■□□ 2.11
TSPAN4-214ENST00000525201 ATP1B4Q9UN42 357 aaPredicted RBP28.23■■■□□ 2.11
TSPAN4-214ENST00000525201 CFAP74Q9C0B2 1584 aa28.22■■■□□ 2.11
TSPAN4-214ENST00000525201 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.18■■■□□ 2.1
TSPAN4-214ENST00000525201 CLIP1P30622 1438 aa28.16■■■□□ 2.1
TSPAN4-214ENST00000525201 CCDC18Q5T9S5 1454 aa28.15■■■□□ 2.1
TSPAN4-214ENST00000525201 CASKIN1Q8WXD9 1431 aa28.14■■■□□ 2.1
TSPAN4-214ENST00000525201 TTC37Q6PGP7 1564 aa28.12■■■□□ 2.09
TSPAN4-214ENST00000525201 KIF14Q15058 1648 aa28.11■■■□□ 2.09
TSPAN4-214ENST00000525201 FANCAO15360 1455 aa28.11■■■□□ 2.09
TSPAN4-214ENST00000525201 PCF11O94913 1555 aaKnown RBP28.11■■■□□ 2.09
TSPAN4-214ENST00000525201 FYCO1Q9BQS8 1478 aa28.1■■■□□ 2.09
TSPAN4-214ENST00000525201 TROQ12816 1431 aaPredicted RBP28.09■■■□□ 2.09
TSPAN4-214ENST00000525201 ADGRL1O94910 1474 aa28.08■■■□□ 2.09
TSPAN4-214ENST00000525201 KDM4FA0A1W2PPD8 638 aa28.07■■■□□ 2.08
TSPAN4-214ENST00000525201 AKNAQ7Z591 1439 aa28.05■■■□□ 2.08
TSPAN4-214ENST00000525201 DENND4BO75064 1496 aaPredicted RBP28.04■■■□□ 2.08
TSPAN4-214ENST00000525201 PLCH2O75038 1416 aa28.03■■■□□ 2.08
TSPAN4-214ENST00000525201 MYO5CQ9NQX4 1742 aa28.03■■■□□ 2.08
TSPAN4-214ENST00000525201 LRRIQ1Q96JM4 1722 aa28.01■■■□□ 2.07
TSPAN4-214ENST00000525201 FRMPD1Q5SYB0 1578 aa27.99■■■□□ 2.07
TSPAN4-214ENST00000525201 RAPGEF3O95398 923 aa27.98■■■□□ 2.07
TSPAN4-214ENST00000525201 RICTORQ6R327 1708 aa27.95■■■□□ 2.06
TSPAN4-214ENST00000525201 EFCAB2Q5VUJ9 269 aa27.94■■■□□ 2.06
TSPAN4-214ENST00000525201 CEP162Q5TB80 1403 aa27.92■■■□□ 2.06
TSPAN4-214ENST00000525201 ZMYM4Q5VZL5 1548 aa27.92■■■□□ 2.06
TSPAN4-214ENST00000525201 ARHGEF40Q8TER5 1519 aa27.92■■■□□ 2.06
TSPAN4-214ENST00000525201 ARHGAP5Q13017 1502 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms