RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 JPH4Q96JJ6 628 aa21.89■■□□□ 1.09
TRAPPC4-205ENST00000525079 PRG4Q92954 1404 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC4-205ENST00000525079 KIAA0586Q9BVV6 1533 aa21.81■■□□□ 1.08
TRAPPC4-205ENST00000525079 TRHP20396 242 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC4-205ENST00000525079 RAPGEF2Q9Y4G8 1499 aa21.74■■□□□ 1.07
TRAPPC4-205ENST00000525079 IQGAP2Q13576 1575 aa21.66■■□□□ 1.06
TRAPPC4-205ENST00000525079 TTBK1Q5TCY1 1321 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC4-205ENST00000525079 PRXQ9BXM0 1461 aa21.6■■□□□ 1.05
TRAPPC4-205ENST00000525079 CARMIL2Q6F5E8 1435 aa21.59■■□□□ 1.05
TRAPPC4-205ENST00000525079 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
TRAPPC4-205ENST00000525079 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC4-205ENST00000525079 PTPRGP23470 1445 aa21.57■■□□□ 1.04
TRAPPC4-205ENST00000525079 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
TRAPPC4-205ENST00000525079 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
TRAPPC4-205ENST00000525079 CTTNBP2Q8WZ74 1663 aa21.55■■□□□ 1.04
TRAPPC4-205ENST00000525079 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
TRAPPC4-205ENST00000525079 DISP1Q96F81 1524 aa21.55■■□□□ 1.04
TRAPPC4-205ENST00000525079 NPM1P06748 294 aaKnown RBP eCLIP21.53■■□□□ 1.04
TRAPPC4-205ENST00000525079 UGGT2Q9NYU1 1516 aa21.53■■□□□ 1.04
TRAPPC4-205ENST00000525079 EEA1Q15075 1411 aa21.49■■□□□ 1.03
TRAPPC4-205ENST00000525079 KIAA0556O60303 1618 aa21.47■■□□□ 1.03
TRAPPC4-205ENST00000525079 KIF13AQ9H1H9 1805 aa21.41■■□□□ 1.02
TRAPPC4-205ENST00000525079 UACAQ9BZF9 1416 aa21.4■■□□□ 1.02
TRAPPC4-205ENST00000525079 MAPKBP1O60336 1514 aa21.39■■□□□ 1.02
TRAPPC4-205ENST00000525079 GOLGA3Q08378 1498 aa21.39■■□□□ 1.01
TRAPPC4-205ENST00000525079 FAM69CQ0P6D2 419 aa21.38■■□□□ 1.01
TRAPPC4-205ENST00000525079 P3H3Q8IVL6 736 aa21.37■■□□□ 1.01
TRAPPC4-205ENST00000525079 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
TRAPPC4-205ENST00000525079 ABCC2Q92887 1545 aa21.37■■□□□ 1.01
TRAPPC4-205ENST00000525079 RANGAP1P46060 587 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC4-205ENST00000525079 UHRF1BP1LA0JNW5 1464 aa21.36■■□□□ 1.01
TRAPPC4-205ENST00000525079 ABCC10Q5T3U5 1492 aa21.35■■□□□ 1.01
TRAPPC4-205ENST00000525079 DIP2BQ9P265 1576 aa21.31■■□□□ 1
TRAPPC4-205ENST00000525079 KIF21BO75037 1637 aa21.31■■□□□ 1
TRAPPC4-205ENST00000525079 PLB1Q6P1J6 1458 aa21.31■■□□□ 1
TRAPPC4-205ENST00000525079 ASXL2Q76L83 1435 aa21.29■■□□□ 1
TRAPPC4-205ENST00000525079 KDM5BQ9UGL1 1544 aa21.27■■□□□ 1
TRAPPC4-205ENST00000525079 ZCCHC11Q5TAX3 1644 aaKnown RBP21.26■□□□□ 0.99
TRAPPC4-205ENST00000525079 ABCA8O94911 1581 aa21.25■□□□□ 0.99
TRAPPC4-205ENST00000525079 SAMD9Q5K651 1589 aa21.24■□□□□ 0.99
TRAPPC4-205ENST00000525079 UBTFP17480 764 aaKnown RBP21.23■□□□□ 0.99
TRAPPC4-205ENST00000525079 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
TRAPPC4-205ENST00000525079 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
TRAPPC4-205ENST00000525079 FHOD3Q2V2M9 1422 aa21.17■□□□□ 0.98
TRAPPC4-205ENST00000525079 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.98
TRAPPC4-205ENST00000525079 GLI2P10070 1586 aa21.14■□□□□ 0.97
TRAPPC4-205ENST00000525079 KCNH8Q96L42 1107 aa21.12■□□□□ 0.97
TRAPPC4-205ENST00000525079 WDR7Q9Y4E6 1490 aa21.12■□□□□ 0.97
TRAPPC4-205ENST00000525079 RAPGEF6Q8TEU7 1601 aa21.11■□□□□ 0.97
TRAPPC4-205ENST00000525079 ATP10BO94823 1461 aa21.1■□□□□ 0.97
TRAPPC4-205ENST00000525079 EFCAB5A4FU69 1503 aa21.09■□□□□ 0.97
TRAPPC4-205ENST00000525079 PPRC1Q5VV67 1664 aaKnown RBP21.07■□□□□ 0.96
TRAPPC4-205ENST00000525079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC4-205ENST00000525079 HNRNPUL2Q1KMD3 747 aaKnown RBP21.06■□□□□ 0.96
TRAPPC4-205ENST00000525079 MAP3K4Q9Y6R4 1608 aa21.06■□□□□ 0.96
TRAPPC4-205ENST00000525079 KDM6BO15054 1643 aa21.05■□□□□ 0.96
TRAPPC4-205ENST00000525079 NUP153P49790 1475 aaKnown RBP21.03■□□□□ 0.96
TRAPPC4-205ENST00000525079 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
TRAPPC4-205ENST00000525079 CD109Q6YHK3 1445 aa20.97■□□□□ 0.95
TRAPPC4-205ENST00000525079 ATP1B4Q9UN42 357 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC4-205ENST00000525079 CFAP43Q8NDM7 1665 aa20.96■□□□□ 0.95
TRAPPC4-205ENST00000525079 TEX14Q8IWB6 1497 aa20.95■□□□□ 0.94
TRAPPC4-205ENST00000525079 COL17A1Q9UMD9 1497 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC4-205ENST00000525079 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
TRAPPC4-205ENST00000525079 FMN1Q68DA7 1419 aa20.91■□□□□ 0.94
TRAPPC4-205ENST00000525079 MAGI3Q5TCQ9 1506 aa20.9■□□□□ 0.94
TRAPPC4-205ENST00000525079 CDK13Q14004 1512 aaKnown RBP20.89■□□□□ 0.94
TRAPPC4-205ENST00000525079 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
TRAPPC4-205ENST00000525079 HECW1Q76N89 1606 aa20.85■□□□□ 0.93
TRAPPC4-205ENST00000525079 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC4-205ENST00000525079 CLIP1P30622 1438 aa20.82■□□□□ 0.92
TRAPPC4-205ENST00000525079 LRRIQ1Q96JM4 1722 aa20.78■□□□□ 0.92
TRAPPC4-205ENST00000525079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRAPPC4-205ENST00000525079 PCF11O94913 1555 aaKnown RBP20.76■□□□□ 0.91
TRAPPC4-205ENST00000525079 LOC105371045A0A1W2PR82 267 aa20.75■□□□□ 0.91
TRAPPC4-205ENST00000525079 TTC37Q6PGP7 1564 aa20.74■□□□□ 0.91
TRAPPC4-205ENST00000525079 CASKIN1Q8WXD9 1431 aa20.74■□□□□ 0.91
TRAPPC4-205ENST00000525079 CDK11AQ9UQ88 783 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC4-205ENST00000525079 ARAP3Q8WWN8 1544 aa20.73■□□□□ 0.91
TRAPPC4-205ENST00000525079 NEO1Q92859 1461 aa20.71■□□□□ 0.91
TRAPPC4-205ENST00000525079 KDM4FA0A1W2PPD8 638 aa20.7■□□□□ 0.9
TRAPPC4-205ENST00000525079 RAPGEF3O95398 923 aa20.7■□□□□ 0.9
TRAPPC4-205ENST00000525079 PHLDB1Q86UU1 1377 aa20.7■□□□□ 0.9
TRAPPC4-205ENST00000525079 KIF14Q15058 1648 aa20.68■□□□□ 0.9
TRAPPC4-205ENST00000525079 TROQ12816 1431 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC4-205ENST00000525079 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
TRAPPC4-205ENST00000525079 FANCAO15360 1455 aa20.67■□□□□ 0.9
TRAPPC4-205ENST00000525079 FYCO1Q9BQS8 1478 aa20.67■□□□□ 0.9
TRAPPC4-205ENST00000525079 CCDC18Q5T9S5 1454 aa20.66■□□□□ 0.9
TRAPPC4-205ENST00000525079 AKNAQ7Z591 1439 aa20.65■□□□□ 0.9
TRAPPC4-205ENST00000525079 PLCH2O75038 1416 aa20.63■□□□□ 0.89
TRAPPC4-205ENST00000525079 CFAP74Q9C0B2 1584 aa20.62■□□□□ 0.89
TRAPPC4-205ENST00000525079 FRMPD1Q5SYB0 1578 aa20.61■□□□□ 0.89
TRAPPC4-205ENST00000525079 ADGRL1O94910 1474 aa20.61■□□□□ 0.89
TRAPPC4-205ENST00000525079 MYO5CQ9NQX4 1742 aa20.61■□□□□ 0.89
TRAPPC4-205ENST00000525079 DENND4BO75064 1496 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC4-205ENST00000525079 EFCAB2Q5VUJ9 269 aa20.58■□□□□ 0.89
TRAPPC4-205ENST00000525079 RICTORQ6R327 1708 aa20.56■□□□□ 0.88
TRAPPC4-205ENST00000525079 SCAPERQ9BY12 1400 aa20.55■□□□□ 0.88
TRAPPC4-205ENST00000525079 ARHGAP5Q13017 1502 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms