RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 SAMD9Q5K651 1589 aa8.27□□□□□ -1.09
CLINT1-208ENST00000524306 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
CLINT1-208ENST00000524306 RRBP1Q9P2E9 1410 aaKnown RBP8.26□□□□□ -1.09
CLINT1-208ENST00000524306 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.093e-6■■■■■ 30.9
CLINT1-208ENST00000524306 GAPVD1Q14C86 1478 aa8.26□□□□□ -1.09
CLINT1-208ENST00000524306 ARHGAP35Q9NRY4 1499 aa8.25□□□□□ -1.09
CLINT1-208ENST00000524306 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
CLINT1-208ENST00000524306 APLP2Q06481 763 aa8.23□□□□□ -1.09
CLINT1-208ENST00000524306 CARMIL1Q5VZK9 1371 aa8.23□□□□□ -1.09
CLINT1-208ENST00000524306 GRIN2BQ13224 1484 aa8.23□□□□□ -1.09
CLINT1-208ENST00000524306 MAGI1Q96QZ7 1491 aaPredicted RBP8.23□□□□□ -1.09
CLINT1-208ENST00000524306 FHAD1B1AJZ9 1412 aa8.23□□□□□ -1.09
CLINT1-208ENST00000524306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.23□□□□□ -1.09
CLINT1-208ENST00000524306 EIF4G3O43432 1585 aaKnown RBP8.23□□□□□ -1.09
CLINT1-208ENST00000524306 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
CLINT1-208ENST00000524306 TIAM1Q13009 1591 aa8.19□□□□□ -1.1
CLINT1-208ENST00000524306 UGGT2Q9NYU1 1516 aa8.19□□□□□ -1.1
CLINT1-208ENST00000524306 FYCO1Q9BQS8 1478 aa8.18□□□□□ -1.1
CLINT1-208ENST00000524306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLINT1-208ENST00000524306 IQGAP2Q13576 1575 aa8.17□□□□□ -1.1
CLINT1-208ENST00000524306 PELP1Q8IZL8 1130 aaKnown RBP8.16□□□□□ -1.1
CLINT1-208ENST00000524306 DNAJC5BQ9UF47 199 aa8.16□□□□□ -1.1
CLINT1-208ENST00000524306 ERCC6Q03468 1493 aa8.15□□□□□ -1.1
CLINT1-208ENST00000524306 LRRC9Q6ZRR7 1453 aa8.14□□□□□ -1.11
CLINT1-208ENST00000524306 CCNB3Q8WWL7 1395 aa8.14□□□□□ -1.11
CLINT1-208ENST00000524306 SYNJ2O15056 1496 aa8.14□□□□□ -1.11
CLINT1-208ENST00000524306 CASKIN1Q8WXD9 1431 aa8.13□□□□□ -1.11
CLINT1-208ENST00000524306 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
CLINT1-208ENST00000524306 ZNF316A6NFI3 1004 aaPredicted RBP8.13□□□□□ -1.11
CLINT1-208ENST00000524306 DHX57Q6P158 1386 aaKnown RBP8.12□□□□□ -1.11
CLINT1-208ENST00000524306 NUP160Q12769 1436 aa8.12□□□□□ -1.11
CLINT1-208ENST00000524306 FMN1Q68DA7 1419 aa8.12□□□□□ -1.11
CLINT1-208ENST00000524306 GRIN2AQ12879 1464 aa8.12□□□□□ -1.11
CLINT1-208ENST00000524306 SNAPC4Q5SXM2 1469 aa8.12□□□□□ -1.11
CLINT1-208ENST00000524306 KANK4Q5T7N3 995 aaPredicted RBP8.11□□□□□ -1.11
CLINT1-208ENST00000524306 SHROOM2Q13796 1616 aa8.11□□□□□ -1.11
CLINT1-208ENST00000524306 PCF11O94913 1555 aaKnown RBP8.11□□□□□ -1.11
CLINT1-208ENST00000524306 DIEXFQ68CQ4 756 aaKnown RBP8.1□□□□□ -1.11
CLINT1-208ENST00000524306 KIAA0556O60303 1618 aa8.1□□□□□ -1.11
CLINT1-208ENST00000524306 CCDC18Q5T9S5 1454 aa8.1□□□□□ -1.11
CLINT1-208ENST00000524306 HECW1Q76N89 1606 aa8.1□□□□□ -1.11
CLINT1-208ENST00000524306 ZNF608Q9ULD9 1512 aaPredicted RBP8.09□□□□□ -1.11
CLINT1-208ENST00000524306 HNRNPUL2Q1KMD3 747 aaKnown RBP8.08□□□□□ -1.12
CLINT1-208ENST00000524306 LRRIQ1Q96JM4 1722 aa8.07□□□□□ -1.12
CLINT1-208ENST00000524306 CEP170Q5SW79 1584 aa8.07□□□□□ -1.12
CLINT1-208ENST00000524306 ARHGEF11O15085 1522 aa8.07□□□□□ -1.12
CLINT1-208ENST00000524306 TDRD9Q8NDG6 1382 aaKnown RBP8.07□□□□□ -1.12
CLINT1-208ENST00000524306 TTBK1Q5TCY1 1321 aaPredicted RBP8.07□□□□□ -1.12
CLINT1-208ENST00000524306 ADCY10Q96PN6 1610 aa8.05□□□□□ -1.12
CLINT1-208ENST00000524306 EHBP1L1Q8N3D4 1523 aa8.05□□□□□ -1.12
CLINT1-208ENST00000524306 TIMELESSQ9UNS1 1208 aa8.05□□□□□ -1.12
CLINT1-208ENST00000524306 DISP1Q96F81 1524 aa8.04□□□□□ -1.12
CLINT1-208ENST00000524306 SETD5Q9C0A6 1442 aa8.04□□□□□ -1.12
CLINT1-208ENST00000524306 PHLDB1Q86UU1 1377 aa8.03□□□□□ -1.12
CLINT1-208ENST00000524306 CHD1O14646 1710 aa8.03□□□□□ -1.12
CLINT1-208ENST00000524306 ACIN1Q9UKV3 1341 aaKnown RBP8.02□□□□□ -1.12
CLINT1-208ENST00000524306 SUPT6HQ7KZ85 1726 aaKnown RBP8.02□□□□□ -1.13
CLINT1-208ENST00000524306 MAPKBP1O60336 1514 aa8.02□□□□□ -1.13
CLINT1-208ENST00000524306 CLASP1Q7Z460 1538 aa8.02□□□□□ -1.13
CLINT1-208ENST00000524306 CENPBP07199 599 aaPredicted RBP8.02□□□□□ -1.13
CLINT1-208ENST00000524306 RAPGEF6Q8TEU7 1601 aa8.02□□□□□ -1.13
CLINT1-208ENST00000524306 FHOD3Q2V2M9 1422 aa8.02□□□□□ -1.13
CLINT1-208ENST00000524306 RAB3GAP2Q9H2M9 1393 aa8.01□□□□□ -1.13
CLINT1-208ENST00000524306 ABCA8O94911 1581 aa8□□□□□ -1.13
CLINT1-208ENST00000524306 FGD6Q6ZV73 1430 aa8□□□□□ -1.13
CLINT1-208ENST00000524306 RANGAP1P46060 587 aaPredicted RBP7.99□□□□□ -1.13
CLINT1-208ENST00000524306 TCOF1Q13428 1488 aaKnown RBP7.99□□□□□ -1.13
CLINT1-208ENST00000524306 AKNAQ7Z591 1439 aa7.99□□□□□ -1.13
CLINT1-208ENST00000524306 SCAF1Q9H7N4 1312 aaKnown RBP7.98□□□□□ -1.13
CLINT1-208ENST00000524306 HFM1A2PYH4 1435 aa7.97□□□□□ -1.13
CLINT1-208ENST00000524306 MYOM3Q5VTT5 1437 aa7.97□□□□□ -1.13
CLINT1-208ENST00000524306 ITSN2Q9NZM3 1697 aa7.97□□□□□ -1.13
CLINT1-208ENST00000524306 CARMIL2Q6F5E8 1435 aa7.96□□□□□ -1.13
CLINT1-208ENST00000524306 EPRSP07814 1512 aaKnown RBP7.96□□□□□ -1.13
CLINT1-208ENST00000524306 MIA2Q96PC5 1412 aa7.96□□□□□ -1.14
CLINT1-208ENST00000524306 NCOA2Q15596 1464 aa7.95□□□□□ -1.14
CLINT1-208ENST00000524306 UHRF1BP1LA0JNW5 1464 aa7.95□□□□□ -1.14
CLINT1-208ENST00000524306 PTPN23Q9H3S7 1636 aa7.94□□□□□ -1.14
CLINT1-208ENST00000524306 UACAQ9BZF9 1416 aa7.93□□□□□ -1.14
CLINT1-208ENST00000524306 NUP153P49790 1475 aaKnown RBP7.93□□□□□ -1.14
CLINT1-208ENST00000524306 MTUS2Q5JR59 1369 aa7.93□□□□□ -1.14
CLINT1-208ENST00000524306 GCC2Q8IWJ2 1684 aa7.93□□□□□ -1.14
CLINT1-208ENST00000524306 NEUROD1Q13562 356 aa7.93□□□□□ -1.14
CLINT1-208ENST00000524306 MAGI3Q5TCQ9 1506 aa7.91□□□□□ -1.14
CLINT1-208ENST00000524306 CROCC2H7BZ55 1655 aa7.91□□□□□ -1.14
CLINT1-208ENST00000524306 MYT1Q01538 1121 aa7.9□□□□□ -1.14
CLINT1-208ENST00000524306 NAIPQ13075 1403 aa7.9□□□□□ -1.14
CLINT1-208ENST00000524306 MIER1Q8N108 512 aa7.9□□□□□ -1.15
CLINT1-208ENST00000524306 ARAP3Q8WWN8 1544 aa7.89□□□□□ -1.15
CLINT1-208ENST00000524306 ROCK1Q13464 1354 aa7.89□□□□□ -1.15
CLINT1-208ENST00000524306 KDM5BQ9UGL1 1544 aa7.89□□□□□ -1.15
CLINT1-208ENST00000524306 PTPRKQ15262 1439 aa7.89□□□□□ -1.15
CLINT1-208ENST00000524306 ADGBQ8N7X0 1667 aa7.88□□□□□ -1.15
CLINT1-208ENST00000524306 DNMT1P26358 1616 aaKnown RBP7.88□□□□□ -1.15
CLINT1-208ENST00000524306 ABCC2Q92887 1545 aa7.88□□□□□ -1.15
CLINT1-208ENST00000524306 FAM50AQ14320 339 aaKnown RBP7.88□□□□□ -1.15
CLINT1-208ENST00000524306 P3H3Q8IVL6 736 aa7.88□□□□□ -1.15
CLINT1-208ENST00000524306 KIF14Q15058 1648 aa7.88□□□□□ -1.15
CLINT1-208ENST00000524306 TROQ12816 1431 aaPredicted RBP7.87□□□□□ -1.15
CLINT1-208ENST00000524306 ARHGEF5Q12774 1597 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms