RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 FAM69CQ0P6D2 419 aa29.1■■■□□ 2.25
TRAM1-204ENST00000521049 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
TRAM1-204ENST00000521049 KIF13AQ9H1H9 1805 aa29.04■■■□□ 2.24
TRAM1-204ENST00000521049 IGF1RP08069 1367 aa29.03■■■□□ 2.24
TRAM1-204ENST00000521049 RUSC2Q8N2Y8 1516 aa29.03■■■□□ 2.24
TRAM1-204ENST00000521049 KIAA0586Q9BVV6 1533 aa28.99■■■□□ 2.23
TRAM1-204ENST00000521049 MAPKBP1O60336 1514 aa28.98■■■□□ 2.23
TRAM1-204ENST00000521049 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
TRAM1-204ENST00000521049 KIF27Q86VH2 1401 aa28.94■■■□□ 2.22
TRAM1-204ENST00000521049 ADCY10Q96PN6 1610 aa28.89■■■□□ 2.22
TRAM1-204ENST00000521049 DIP2BQ9P265 1576 aa28.85■■■□□ 2.21
TRAM1-204ENST00000521049 PTPRGP23470 1445 aa28.83■■■□□ 2.21
TRAM1-204ENST00000521049 CUL7Q14999 1698 aa28.81■■■□□ 2.2
TRAM1-204ENST00000521049 CARMIL1Q5VZK9 1371 aa28.81■■■□□ 2.2
TRAM1-204ENST00000521049 CARMIL2Q6F5E8 1435 aa28.74■■■□□ 2.19
TRAM1-204ENST00000521049 TNIKQ9UKE5 1360 aa28.74■■■□□ 2.19
TRAM1-204ENST00000521049 KDM4FA0A1W2PPD8 638 aa28.72■■■□□ 2.19
TRAM1-204ENST00000521049 TTBK1Q5TCY1 1321 aaPredicted RBP28.7■■■□□ 2.19
TRAM1-204ENST00000521049 KDM6BO15054 1643 aa28.69■■■□□ 2.18
TRAM1-204ENST00000521049 ABCC2Q92887 1545 aa28.66■■■□□ 2.18
TRAM1-204ENST00000521049 PLB1Q6P1J6 1458 aa28.62■■■□□ 2.17
TRAM1-204ENST00000521049 ASXL2Q76L83 1435 aa28.6■■■□□ 2.17
TRAM1-204ENST00000521049 UHRF1BP1LA0JNW5 1464 aa28.59■■■□□ 2.17
TRAM1-204ENST00000521049 TSPOAP1O95153 1857 aa28.57■■■□□ 2.16
TRAM1-204ENST00000521049 UACAQ9BZF9 1416 aa28.57■■■□□ 2.16
TRAM1-204ENST00000521049 IQGAP2Q13576 1575 aa28.57■■■□□ 2.16
TRAM1-204ENST00000521049 GLI2P10070 1586 aa28.54■■■□□ 2.16
TRAM1-204ENST00000521049 DISP1Q96F81 1524 aa28.52■■■□□ 2.16
TRAM1-204ENST00000521049 RAPGEF2Q9Y4G8 1499 aa28.46■■■□□ 2.15
TRAM1-204ENST00000521049 KDM5BQ9UGL1 1544 aa28.45■■■□□ 2.15
TRAM1-204ENST00000521049 UGGT2Q9NYU1 1516 aa28.43■■■□□ 2.14
TRAM1-204ENST00000521049 EPRSP07814 1512 aaKnown RBP28.42■■■□□ 2.14
TRAM1-204ENST00000521049 PPRC1Q5VV67 1664 aaKnown RBP28.39■■■□□ 2.14
TRAM1-204ENST00000521049 COL17A1Q9UMD9 1497 aaPredicted RBP28.38■■■□□ 2.13
TRAM1-204ENST00000521049 TEX14Q8IWB6 1497 aa28.34■■■□□ 2.13
TRAM1-204ENST00000521049 KIAA0556O60303 1618 aa28.3■■■□□ 2.12
TRAM1-204ENST00000521049 ADGRL1O94910 1474 aa28.3■■■□□ 2.12
TRAM1-204ENST00000521049 MAP3K4Q9Y6R4 1608 aa28.29■■■□□ 2.12
TRAM1-204ENST00000521049 ZCCHC11Q5TAX3 1644 aaKnown RBP28.27■■■□□ 2.12
TRAM1-204ENST00000521049 WDR7Q9Y4E6 1490 aa28.25■■■□□ 2.11
TRAM1-204ENST00000521049 GOLGA3Q08378 1498 aa28.21■■■□□ 2.11
TRAM1-204ENST00000521049 KCNH8Q96L42 1107 aa28.18■■■□□ 2.1
TRAM1-204ENST00000521049 ILDR1Q86SU0 546 aaPredicted RBP28.17■■■□□ 2.1
TRAM1-204ENST00000521049 CD109Q6YHK3 1445 aa28.17■■■□□ 2.1
TRAM1-204ENST00000521049 MAGI3Q5TCQ9 1506 aa28.14■■■□□ 2.1
TRAM1-204ENST00000521049 FAM9AQ8IZU1 332 aaPredicted RBP28.1■■■□□ 2.09
TRAM1-204ENST00000521049 ABCA8O94911 1581 aa28.1■■■□□ 2.09
TRAM1-204ENST00000521049 PRXQ9BXM0 1461 aa28.09■■■□□ 2.09
TRAM1-204ENST00000521049 CTTNBP2Q8WZ74 1663 aa28.05■■■□□ 2.08
TRAM1-204ENST00000521049 CFAP43Q8NDM7 1665 aa28.03■■■□□ 2.08
TRAM1-204ENST00000521049 HECW2Q9P2P5 1572 aa27.97■■■□□ 2.07
TRAM1-204ENST00000521049 P3H3Q8IVL6 736 aa27.96■■■□□ 2.07
TRAM1-204ENST00000521049 ATP10BO94823 1461 aa27.95■■■□□ 2.06
TRAM1-204ENST00000521049 ARAP3Q8WWN8 1544 aa27.93■■■□□ 2.06
TRAM1-204ENST00000521049 PHLDB1Q86UU1 1377 aa27.93■■■□□ 2.06
TRAM1-204ENST00000521049 ARID3CA6NKF2 412 aa27.92■■■□□ 2.06
TRAM1-204ENST00000521049 CSRNP3Q8WYN3 585 aa27.88■■■□□ 2.05
TRAM1-204ENST00000521049 RAPGEF3O95398 923 aa27.8■■■□□ 2.04
TRAM1-204ENST00000521049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.79■■■□□ 2.04
TRAM1-204ENST00000521049 HNRNPUL2Q1KMD3 747 aaKnown RBP27.79■■■□□ 2.04
TRAM1-204ENST00000521049 ABCA9Q8IUA7 1624 aa27.78■■■□□ 2.04
TRAM1-204ENST00000521049 KIF21BO75037 1637 aa27.77■■■□□ 2.04
TRAM1-204ENST00000521049 NEO1Q92859 1461 aa27.76■■■□□ 2.04
TRAM1-204ENST00000521049 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
TRAM1-204ENST00000521049 RAPGEF6Q8TEU7 1601 aa27.69■■■□□ 2.02
TRAM1-204ENST00000521049 PTPRMP28827 1452 aa27.69■■■□□ 2.02
TRAM1-204ENST00000521049 PLEKHD1A6NEE1 506 aa27.68■■■□□ 2.02
TRAM1-204ENST00000521049 NUP153P49790 1475 aaKnown RBP27.66■■■□□ 2.02
TRAM1-204ENST00000521049 ARID4BQ4LE39 1312 aaPredicted RBP27.65■■■□□ 2.02
TRAM1-204ENST00000521049 ADAMTSL3P82987 1691 aa27.64■■■□□ 2.02
TRAM1-204ENST00000521049 RANGAP1P46060 587 aaPredicted RBP27.63■■■□□ 2.01
TRAM1-204ENST00000521049 EEA1Q15075 1411 aa27.63■■■□□ 2.01
TRAM1-204ENST00000521049 FBXO41Q8TF61 875 aa27.61■■■□□ 2.01
TRAM1-204ENST00000521049 FHOD3Q2V2M9 1422 aa27.59■■■□□ 2.01
TRAM1-204ENST00000521049 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
TRAM1-204ENST00000521049 FRMPD1Q5SYB0 1578 aa27.56■■■□□ 2
TRAM1-204ENST00000521049 AKNAQ7Z591 1439 aa27.55■■■□□ 2
TRAM1-204ENST00000521049 BCORL1Q5H9F3 1711 aa27.52■■■□□ 2
TRAM1-204ENST00000521049 FANCAO15360 1455 aa27.5■■□□□ 1.99
TRAM1-204ENST00000521049 MADDQ8WXG6 1647 aa27.46■■□□□ 1.99
TRAM1-204ENST00000521049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.46■■□□□ 1.99
TRAM1-204ENST00000521049 PCF11O94913 1555 aaKnown RBP27.44■■□□□ 1.98
TRAM1-204ENST00000521049 ARHGEF40Q8TER5 1519 aa27.44■■□□□ 1.98
TRAM1-204ENST00000521049 LMTK3Q96Q04 1460 aa27.44■■□□□ 1.98
TRAM1-204ENST00000521049 POGZQ7Z3K3 1410 aa27.43■■□□□ 1.98
TRAM1-204ENST00000521049 EFCAB5A4FU69 1503 aa27.42■■□□□ 1.98
TRAM1-204ENST00000521049 MAGI2Q86UL8 1455 aa27.4■■□□□ 1.98
TRAM1-204ENST00000521049 RICTORQ6R327 1708 aa27.4■■□□□ 1.98
TRAM1-204ENST00000521049 CFAP74Q9C0B2 1584 aa27.39■■□□□ 1.98
TRAM1-204ENST00000521049 ZMYM4Q5VZL5 1548 aa27.37■■□□□ 1.97
TRAM1-204ENST00000521049 PLCH2O75038 1416 aa27.37■■□□□ 1.97
TRAM1-204ENST00000521049 YEATS2Q9ULM3 1422 aa27.36■■□□□ 1.97
TRAM1-204ENST00000521049 SCAPERQ9BY12 1400 aa27.34■■□□□ 1.97
TRAM1-204ENST00000521049 ZFYVE16Q7Z3T8 1539 aa27.34■■□□□ 1.97
TRAM1-204ENST00000521049 TTC37Q6PGP7 1564 aa27.34■■□□□ 1.97
TRAM1-204ENST00000521049 HSPA2P54652 639 aa27.33■■□□□ 1.97
TRAM1-204ENST00000521049 EFCAB2Q5VUJ9 269 aa27.32■■□□□ 1.96
TRAM1-204ENST00000521049 RIMS1Q86UR5 1692 aaKnown RBP27.32■■□□□ 1.96
TRAM1-204ENST00000521049 MLECQ14165 292 aa27.31■■□□□ 1.96
TRAM1-204ENST00000521049 PLPPR3Q6T4P5 718 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms