RNA–Protein interactions for RNA: ENST00000520464.1

CREBRF-204, Transcript of CREB3 regulatory factor, humanhuman

TSL 2

Gene CREBRF, Length 5,163 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-204ENST00000520464 TIMELESSQ9UNS1 1208 aa11.73□□□□□ -0.53
CREBRF-204ENST00000520464 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
CREBRF-204ENST00000520464 ZNF326Q5BKZ1 582 aaKnown RBP11.71□□□□□ -0.53
CREBRF-204ENST00000520464 CCNB3Q8WWL7 1395 aa11.71□□□□□ -0.54
CREBRF-204ENST00000520464 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.54
CREBRF-204ENST00000520464 GLIPR1L2Q4G1C9 344 aa11.7□□□□□ -0.54
CREBRF-204ENST00000520464 NEFMP07197 916 aa11.7□□□□□ -0.54
CREBRF-204ENST00000520464 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
CREBRF-204ENST00000520464 CFTRP13569 1480 aa11.68□□□□□ -0.54
CREBRF-204ENST00000520464 SLC24A1O60721 1099 aa11.67□□□□□ -0.54
CREBRF-204ENST00000520464 PEG3Q9GZU2 1588 aa11.65□□□□□ -0.54
CREBRF-204ENST00000520464 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
CREBRF-204ENST00000520464 ERICH3Q5RHP9 1530 aa11.63□□□□□ -0.55
CREBRF-204ENST00000520464 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
CREBRF-204ENST00000520464 CHIC2Q9UKJ5 165 aa11.62□□□□□ -0.55
CREBRF-204ENST00000520464 TDRD9Q8NDG6 1382 aaKnown RBP11.61□□□□□ -0.55
CREBRF-204ENST00000520464 CCDC18Q5T9S5 1454 aa11.61□□□□□ -0.55
CREBRF-204ENST00000520464 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
CREBRF-204ENST00000520464 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
CREBRF-204ENST00000520464 KIF21BO75037 1637 aa11.61□□□□□ -0.55
CREBRF-204ENST00000520464 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
CREBRF-204ENST00000520464 KANK1Q14678 1352 aa11.59□□□□□ -0.55
CREBRF-204ENST00000520464 BCANQ96GW7 911 aa11.59□□□□□ -0.55
CREBRF-204ENST00000520464 GAPVD1Q14C86 1478 aa11.59□□□□□ -0.55
CREBRF-204ENST00000520464 EIF4G2P78344 907 aaKnown RBP eCLIP11.58□□□□□ -0.55
CREBRF-204ENST00000520464 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
CREBRF-204ENST00000520464 CC2D2AQ9P2K1 1620 aa11.57□□□□□ -0.56
CREBRF-204ENST00000520464 TOP2BQ02880 1626 aa11.56□□□□□ -0.56
CREBRF-204ENST00000520464 MRC2Q9UBG0 1479 aa11.56□□□□□ -0.56
CREBRF-204ENST00000520464 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
CREBRF-204ENST00000520464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.564e-6■□□□□ 11.1
CREBRF-204ENST00000520464 RRP7BPQ9NSQ0 103 aa11.55□□□□□ -0.56
CREBRF-204ENST00000520464 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
CREBRF-204ENST00000520464 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
CREBRF-204ENST00000520464 CHGAP10645 457 aaKnown RBP11.54□□□□□ -0.56
CREBRF-204ENST00000520464 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
CREBRF-204ENST00000520464 IGF1RP08069 1367 aa11.53□□□□□ -0.56
CREBRF-204ENST00000520464 ANKRD30AQ9BXX3 1397 aa11.52□□□□□ -0.57
CREBRF-204ENST00000520464 EFCAB5A4FU69 1503 aa11.52□□□□□ -0.57
CREBRF-204ENST00000520464 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
CREBRF-204ENST00000520464 SCAF1Q9H7N4 1312 aaKnown RBP11.52□□□□□ -0.57
CREBRF-204ENST00000520464 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
CREBRF-204ENST00000520464 CUX1P39880 1505 aa11.51□□□□□ -0.57
CREBRF-204ENST00000520464 EFCAB2Q5VUJ9 269 aa11.51□□□□□ -0.57
CREBRF-204ENST00000520464 ANP32EQ9BTT0 268 aa11.49□□□□□ -0.57
CREBRF-204ENST00000520464 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
CREBRF-204ENST00000520464 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
CREBRF-204ENST00000520464 JPH4Q96JJ6 628 aa11.47□□□□□ -0.57
CREBRF-204ENST00000520464 FHOD3Q2V2M9 1422 aa11.47□□□□□ -0.57
CREBRF-204ENST00000520464 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
CREBRF-204ENST00000520464 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
CREBRF-204ENST00000520464 ANP32AP39687 249 aaKnown RBP11.44□□□□□ -0.58
CREBRF-204ENST00000520464 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.44□□□□□ -0.58
CREBRF-204ENST00000520464 SYNJ1O43426 1573 aa11.44□□□□□ -0.58
CREBRF-204ENST00000520464 PTPRGP23470 1445 aa11.43□□□□□ -0.58
CREBRF-204ENST00000520464 TMC1Q8TDI8 760 aa11.43□□□□□ -0.58
CREBRF-204ENST00000520464 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
CREBRF-204ENST00000520464 DDX10Q13206 875 aaKnown RBP11.42□□□□□ -0.58
CREBRF-204ENST00000520464 UNC13AQ9UPW8 1703 aa11.42□□□□□ -0.58
CREBRF-204ENST00000520464 FYCO1Q9BQS8 1478 aa11.42□□□□□ -0.58
CREBRF-204ENST00000520464 PPP1R15AO75807 674 aaPredicted RBP11.42□□□□□ -0.58
CREBRF-204ENST00000520464 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
CREBRF-204ENST00000520464 WDR43Q15061 677 aaKnown RBP eCLIP11.41□□□□□ -0.58
CREBRF-204ENST00000520464 CUL7Q14999 1698 aa11.4□□□□□ -0.58
CREBRF-204ENST00000520464 RAD54L2Q9Y4B4 1467 aa11.4□□□□□ -0.58
CREBRF-204ENST00000520464 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.58
CREBRF-204ENST00000520464 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.58
CREBRF-204ENST00000520464 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
CREBRF-204ENST00000520464 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
CREBRF-204ENST00000520464 CARD11Q9BXL7 1154 aa11.38□□□□□ -0.59
CREBRF-204ENST00000520464 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
CREBRF-204ENST00000520464 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
CREBRF-204ENST00000520464 MYOM3Q5VTT5 1437 aa11.37□□□□□ -0.59
CREBRF-204ENST00000520464 RAB3GAP2Q9H2M9 1393 aa11.37□□□□□ -0.59
CREBRF-204ENST00000520464 MRS2Q9HD23 443 aa11.35□□□□□ -0.59
CREBRF-204ENST00000520464 HNRNPUQ00839 825 aaKnown RBP eCLIP11.35□□□□□ -0.59
CREBRF-204ENST00000520464 BIVM-ERCC5R4GMW8 1640 aa11.34□□□□□ -0.59
CREBRF-204ENST00000520464 UACAQ9BZF9 1416 aa11.34□□□□□ -0.59
CREBRF-204ENST00000520464 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
CREBRF-204ENST00000520464 STAC3Q96MF2 364 aa11.34□□□□□ -0.59
CREBRF-204ENST00000520464 EIF3AQ14152 1382 aaKnown RBP11.33□□□□□ -0.6
CREBRF-204ENST00000520464 KNSTRNQ9Y448 316 aa11.33□□□□□ -0.6
CREBRF-204ENST00000520464 TMF1P82094 1093 aa11.33□□□□□ -0.6
CREBRF-204ENST00000520464 EHBP1L1Q8N3D4 1523 aa11.32□□□□□ -0.6
CREBRF-204ENST00000520464 ARID4BQ4LE39 1312 aaPredicted RBP11.32□□□□□ -0.6
CREBRF-204ENST00000520464 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
CREBRF-204ENST00000520464 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
CREBRF-204ENST00000520464 HECW1Q76N89 1606 aa11.32□□□□□ -0.6
CREBRF-204ENST00000520464 SPAG9O60271 1321 aaKnown RBP11.32□□□□□ -0.6
CREBRF-204ENST00000520464 PLEKHH2Q8IVE3 1493 aa11.32□□□□□ -0.6
CREBRF-204ENST00000520464 SYNJ2O15056 1496 aa11.31□□□□□ -0.6
CREBRF-204ENST00000520464 NUP155O75694 1391 aa11.31□□□□□ -0.6
CREBRF-204ENST00000520464 MPHOSPH9Q99550 1183 aa11.31□□□□□ -0.6
CREBRF-204ENST00000520464 AQRO60306 1485 aaKnown RBP eCLIP11.31□□□□□ -0.6
CREBRF-204ENST00000520464 BCL11AQ9H165 835 aa11.31□□□□□ -0.6
CREBRF-204ENST00000520464 CCER2I3L3R5 266 aa11.3□□□□□ -0.6
CREBRF-204ENST00000520464 ROCK2O75116 1388 aaKnown RBP11.3□□□□□ -0.6
CREBRF-204ENST00000520464 EIF5BO60841 1220 aaKnown RBP11.29□□□□□ -0.6
CREBRF-204ENST00000520464 MAGI1Q96QZ7 1491 aaPredicted RBP11.29□□□□□ -0.6
CREBRF-204ENST00000520464 MAP3K1Q13233 1512 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms