RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 JPH4Q96JJ6 628 aa23.91■■□□□ 1.42
VEGFA-221ENST00000520265 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
VEGFA-221ENST00000520265 KIAA0586Q9BVV6 1533 aa23.85■■□□□ 1.41
VEGFA-221ENST00000520265 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
VEGFA-221ENST00000520265 RAPGEF2Q9Y4G8 1499 aa23.83■■□□□ 1.41
VEGFA-221ENST00000520265 TTBK1Q5TCY1 1321 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-221ENST00000520265 IQGAP2Q13576 1575 aa23.76■■□□□ 1.39
VEGFA-221ENST00000520265 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-221ENST00000520265 CARMIL2Q6F5E8 1435 aa23.68■■□□□ 1.38
VEGFA-221ENST00000520265 CTTNBP2Q8WZ74 1663 aa23.65■■□□□ 1.38
VEGFA-221ENST00000520265 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
VEGFA-221ENST00000520265 CSRNP3Q8WYN3 585 aa23.65■■□□□ 1.38
VEGFA-221ENST00000520265 PRXQ9BXM0 1461 aa23.64■■□□□ 1.38
VEGFA-221ENST00000520265 EEA1Q15075 1411 aa23.62■■□□□ 1.37
VEGFA-221ENST00000520265 PTPRGP23470 1445 aa23.6■■□□□ 1.37
VEGFA-221ENST00000520265 NPM1P06748 294 aaKnown RBP eCLIP23.6■■□□□ 1.37
VEGFA-221ENST00000520265 TNIKQ9UKE5 1360 aa23.58■■□□□ 1.37
VEGFA-221ENST00000520265 UGGT2Q9NYU1 1516 aa23.56■■□□□ 1.36
VEGFA-221ENST00000520265 ADCY10Q96PN6 1610 aa23.54■■□□□ 1.36
VEGFA-221ENST00000520265 DISP1Q96F81 1524 aa23.54■■□□□ 1.36
VEGFA-221ENST00000520265 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
VEGFA-221ENST00000520265 KIAA0556O60303 1618 aa23.52■■□□□ 1.36
VEGFA-221ENST00000520265 RANGAP1P46060 587 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-221ENST00000520265 GOLGA3Q08378 1498 aa23.48■■□□□ 1.35
VEGFA-221ENST00000520265 P3H3Q8IVL6 736 aa23.42■■□□□ 1.34
VEGFA-221ENST00000520265 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
VEGFA-221ENST00000520265 KIF21BO75037 1637 aa23.41■■□□□ 1.34
VEGFA-221ENST00000520265 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
VEGFA-221ENST00000520265 ABCC2Q92887 1545 aa23.38■■□□□ 1.33
VEGFA-221ENST00000520265 FAM69CQ0P6D2 419 aa23.37■■□□□ 1.33
VEGFA-221ENST00000520265 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
VEGFA-221ENST00000520265 UHRF1BP1LA0JNW5 1464 aa23.34■■□□□ 1.33
VEGFA-221ENST00000520265 KIF13AQ9H1H9 1805 aa23.33■■□□□ 1.33
VEGFA-221ENST00000520265 PLB1Q6P1J6 1458 aa23.32■■□□□ 1.32
VEGFA-221ENST00000520265 ABCC10Q5T3U5 1492 aa23.31■■□□□ 1.32
VEGFA-221ENST00000520265 DIP2BQ9P265 1576 aa23.29■■□□□ 1.32
VEGFA-221ENST00000520265 ASXL2Q76L83 1435 aa23.28■■□□□ 1.32
VEGFA-221ENST00000520265 ZCCHC11Q5TAX3 1644 aaKnown RBP23.27■■□□□ 1.32
VEGFA-221ENST00000520265 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
VEGFA-221ENST00000520265 SAMD9Q5K651 1589 aa23.27■■□□□ 1.32
VEGFA-221ENST00000520265 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
VEGFA-221ENST00000520265 ABCA8O94911 1581 aa23.23■■□□□ 1.31
VEGFA-221ENST00000520265 FHOD3Q2V2M9 1422 aa23.23■■□□□ 1.31
VEGFA-221ENST00000520265 TSPOAP1O95153 1857 aa23.22■■□□□ 1.31
VEGFA-221ENST00000520265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-221ENST00000520265 HNRNPUL2Q1KMD3 747 aaKnown RBP23.17■■□□□ 1.3
VEGFA-221ENST00000520265 EFCAB5A4FU69 1503 aa23.17■■□□□ 1.3
VEGFA-221ENST00000520265 RAPGEF6Q8TEU7 1601 aa23.15■■□□□ 1.3
VEGFA-221ENST00000520265 WDR7Q9Y4E6 1490 aa23.13■■□□□ 1.29
VEGFA-221ENST00000520265 KCNH8Q96L42 1107 aa23.11■■□□□ 1.29
VEGFA-221ENST00000520265 EPRSP07814 1512 aaKnown RBP23.11■■□□□ 1.29
VEGFA-221ENST00000520265 GLI2P10070 1586 aa23.08■■□□□ 1.29
VEGFA-221ENST00000520265 ATP1B4Q9UN42 357 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-221ENST00000520265 ATP10BO94823 1461 aa23.05■■□□□ 1.28
VEGFA-221ENST00000520265 KDM6BO15054 1643 aa23.04■■□□□ 1.28
VEGFA-221ENST00000520265 NUP153P49790 1475 aaKnown RBP23.02■■□□□ 1.28
VEGFA-221ENST00000520265 ARHGAP35Q9NRY4 1499 aa23.02■■□□□ 1.28
VEGFA-221ENST00000520265 MAP3K4Q9Y6R4 1608 aa23■■□□□ 1.27
VEGFA-221ENST00000520265 FMN1Q68DA7 1419 aa22.98■■□□□ 1.27
VEGFA-221ENST00000520265 PPRC1Q5VV67 1664 aaKnown RBP22.97■■□□□ 1.27
VEGFA-221ENST00000520265 TEX14Q8IWB6 1497 aa22.97■■□□□ 1.27
VEGFA-221ENST00000520265 CD109Q6YHK3 1445 aa22.95■■□□□ 1.26
VEGFA-221ENST00000520265 CFAP43Q8NDM7 1665 aa22.93■■□□□ 1.26
VEGFA-221ENST00000520265 HECW1Q76N89 1606 aa22.92■■□□□ 1.26
VEGFA-221ENST00000520265 PLEKHD1A6NEE1 506 aa22.91■■□□□ 1.26
VEGFA-221ENST00000520265 CDK13Q14004 1512 aaKnown RBP22.91■■□□□ 1.26
VEGFA-221ENST00000520265 CLIP1P30622 1438 aa22.89■■□□□ 1.25
VEGFA-221ENST00000520265 MAGI3Q5TCQ9 1506 aa22.83■■□□□ 1.25
VEGFA-221ENST00000520265 ABCA9Q8IUA7 1624 aa22.83■■□□□ 1.25
VEGFA-221ENST00000520265 PCF11O94913 1555 aaKnown RBP22.82■■□□□ 1.24
VEGFA-221ENST00000520265 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-221ENST00000520265 CDK11AQ9UQ88 783 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-221ENST00000520265 COL17A1Q9UMD9 1497 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-221ENST00000520265 LOC105371045A0A1W2PR82 267 aa22.75■■□□□ 1.23
VEGFA-221ENST00000520265 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
VEGFA-221ENST00000520265 CASKIN1Q8WXD9 1431 aa22.74■■□□□ 1.23
VEGFA-221ENST00000520265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.72■■□□□ 1.235e-6■□□□□ 9.5
VEGFA-221ENST00000520265 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
VEGFA-221ENST00000520265 LRRIQ1Q96JM4 1722 aa22.72■■□□□ 1.23
VEGFA-221ENST00000520265 CCDC18Q5T9S5 1454 aa22.72■■□□□ 1.23
VEGFA-221ENST00000520265 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
VEGFA-221ENST00000520265 KIF14Q15058 1648 aa22.7■■□□□ 1.22
VEGFA-221ENST00000520265 TROQ12816 1431 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-221ENST00000520265 NEO1Q92859 1461 aa22.66■■□□□ 1.22
VEGFA-221ENST00000520265 CFAP74Q9C0B2 1584 aa22.65■■□□□ 1.22
VEGFA-221ENST00000520265 FANCAO15360 1455 aa22.65■■□□□ 1.22
VEGFA-221ENST00000520265 PHLDB1Q86UU1 1377 aa22.63■■□□□ 1.21
VEGFA-221ENST00000520265 ARAP3Q8WWN8 1544 aa22.63■■□□□ 1.21
VEGFA-221ENST00000520265 RAPGEF3O95398 923 aa22.62■■□□□ 1.21
VEGFA-221ENST00000520265 MYO5CQ9NQX4 1742 aa22.61■■□□□ 1.21
VEGFA-221ENST00000520265 AKNAQ7Z591 1439 aa22.6■■□□□ 1.21
VEGFA-221ENST00000520265 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
VEGFA-221ENST00000520265 PLCH2O75038 1416 aa22.57■■□□□ 1.2
VEGFA-221ENST00000520265 DENND4BO75064 1496 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-221ENST00000520265 ADGRL1O94910 1474 aa22.54■■□□□ 1.2
VEGFA-221ENST00000520265 MTUS2Q5JR59 1369 aa22.54■■□□□ 1.2
VEGFA-221ENST00000520265 EFCAB2Q5VUJ9 269 aa22.54■■□□□ 1.2
VEGFA-221ENST00000520265 FRMPD1Q5SYB0 1578 aa22.51■■□□□ 1.19
VEGFA-221ENST00000520265 KDM4FA0A1W2PPD8 638 aa22.5■■□□□ 1.19
VEGFA-221ENST00000520265 SCAPERQ9BY12 1400 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms