RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 UBTFP17480 764 aaKnown RBP28.99■■■□□ 2.23
SDC2-205ENST00000520233 KIAA0586Q9BVV6 1533 aa28.99■■■□□ 2.23
SDC2-205ENST00000520233 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.23
SDC2-205ENST00000520233 LOC105371045A0A1W2PR82 267 aa28.95■■■□□ 2.22
SDC2-205ENST00000520233 CTTNBP2Q8WZ74 1663 aa28.93■■■□□ 2.22
SDC2-205ENST00000520233 TNIKQ9UKE5 1360 aa28.88■■■□□ 2.21
SDC2-205ENST00000520233 IQGAP2Q13576 1575 aa28.88■■■□□ 2.21
SDC2-205ENST00000520233 JPH4Q96JJ6 628 aa28.82■■■□□ 2.2
SDC2-205ENST00000520233 SHROOM2Q13796 1616 aa28.79■■■□□ 2.2
SDC2-205ENST00000520233 UGGT2Q9NYU1 1516 aa28.77■■■□□ 2.2
SDC2-205ENST00000520233 PRG4Q92954 1404 aaPredicted RBP28.7■■■□□ 2.19
SDC2-205ENST00000520233 RANGAP1P46060 587 aaPredicted RBP28.68■■■□□ 2.18
SDC2-205ENST00000520233 DISP1Q96F81 1524 aa28.65■■■□□ 2.18
SDC2-205ENST00000520233 CARMIL2Q6F5E8 1435 aa28.65■■■□□ 2.18
SDC2-205ENST00000520233 SAMD9Q5K651 1589 aa28.62■■■□□ 2.17
SDC2-205ENST00000520233 CEP162Q5TB80 1403 aa28.62■■■□□ 2.17
SDC2-205ENST00000520233 EFCAB5A4FU69 1503 aa28.62■■■□□ 2.17
SDC2-205ENST00000520233 CLIP1P30622 1438 aa28.61■■■□□ 2.17
SDC2-205ENST00000520233 KIAA0556O60303 1618 aa28.61■■■□□ 2.17
SDC2-205ENST00000520233 ERCC6L2Q5T890 1561 aa28.59■■■□□ 2.17
SDC2-205ENST00000520233 ARHGAP35Q9NRY4 1499 aa28.58■■■□□ 2.17
SDC2-205ENST00000520233 ARHGEF11O15085 1522 aa28.57■■■□□ 2.16
SDC2-205ENST00000520233 P3H3Q8IVL6 736 aa28.54■■■□□ 2.16
SDC2-205ENST00000520233 RIMBP3CA6NJZ7 1639 aa28.49■■■□□ 2.15
SDC2-205ENST00000520233 RIMBP3BA6NNM3 1639 aa28.49■■■□□ 2.15
SDC2-205ENST00000520233 RIMBP3Q9UFD9 1639 aa28.49■■■□□ 2.15
SDC2-205ENST00000520233 FHOD3Q2V2M9 1422 aa28.49■■■□□ 2.15
SDC2-205ENST00000520233 PTPRGP23470 1445 aa28.44■■■□□ 2.14
SDC2-205ENST00000520233 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
SDC2-205ENST00000520233 TTBK1Q5TCY1 1321 aaPredicted RBP28.39■■■□□ 2.13
SDC2-205ENST00000520233 FMN1Q68DA7 1419 aa28.36■■■□□ 2.13
SDC2-205ENST00000520233 CYB5RLQ6IPT4 315 aa28.28■■■□□ 2.12
SDC2-205ENST00000520233 UACAQ9BZF9 1416 aa28.27■■■□□ 2.12
SDC2-205ENST00000520233 PLB1Q6P1J6 1458 aa28.27■■■□□ 2.12
SDC2-205ENST00000520233 ABCA8O94911 1581 aa28.26■■■□□ 2.11
SDC2-205ENST00000520233 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.11
SDC2-205ENST00000520233 UHRF1BP1LA0JNW5 1464 aa28.22■■■□□ 2.11
SDC2-205ENST00000520233 RAPGEF6Q8TEU7 1601 aa28.22■■■□□ 2.11
SDC2-205ENST00000520233 CASKIN1Q8WXD9 1431 aa28.21■■■□□ 2.11
SDC2-205ENST00000520233 ABCC2Q92887 1545 aa28.2■■■□□ 2.1
SDC2-205ENST00000520233 PCF11O94913 1555 aaKnown RBP28.17■■■□□ 2.1
SDC2-205ENST00000520233 FYCO1Q9BQS8 1478 aa28.16■■■□□ 2.1
SDC2-205ENST00000520233 ADCY10Q96PN6 1610 aa28.15■■■□□ 2.1
SDC2-205ENST00000520233 HECW1Q76N89 1606 aa28.14■■■□□ 2.1
SDC2-205ENST00000520233 NUP153P49790 1475 aaKnown RBP28.14■■■□□ 2.09
SDC2-205ENST00000520233 ATP1B4Q9UN42 357 aaPredicted RBP28.12■■■□□ 2.09
SDC2-205ENST00000520233 KDM5BQ9UGL1 1544 aa28.08■■■□□ 2.08
SDC2-205ENST00000520233 EPRSP07814 1512 aaKnown RBP28.05■■■□□ 2.08
SDC2-205ENST00000520233 ATP10BO94823 1461 aa28.04■■■□□ 2.08
SDC2-205ENST00000520233 NPM1P06748 294 aaKnown RBP eCLIP28.03■■■□□ 2.08
SDC2-205ENST00000520233 CCDC18Q5T9S5 1454 aa28.02■■■□□ 2.08
SDC2-205ENST00000520233 ARID3CA6NKF2 412 aa28.02■■■□□ 2.08
SDC2-205ENST00000520233 ZCCHC11Q5TAX3 1644 aaKnown RBP28■■■□□ 2.07
SDC2-205ENST00000520233 LRRIQ1Q96JM4 1722 aa27.99■■■□□ 2.07
SDC2-205ENST00000520233 CDK13Q14004 1512 aaKnown RBP27.98■■■□□ 2.07
SDC2-205ENST00000520233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.97■■■□□ 2.07
SDC2-205ENST00000520233 HNRNPUL2Q1KMD3 747 aaKnown RBP27.97■■■□□ 2.07
SDC2-205ENST00000520233 MAP3K1Q13233 1512 aa27.94■■■□□ 2.06
SDC2-205ENST00000520233 APLP2Q06481 763 aa27.94■■■□□ 2.06
SDC2-205ENST00000520233 TIAM1Q13009 1591 aa27.91■■■□□ 2.06
SDC2-205ENST00000520233 CDK11AQ9UQ88 783 aaPredicted RBP27.91■■■□□ 2.06
SDC2-205ENST00000520233 CFAP43Q8NDM7 1665 aa27.89■■■□□ 2.06
SDC2-205ENST00000520233 PLEKHD1A6NEE1 506 aa27.88■■■□□ 2.05
SDC2-205ENST00000520233 MAPKBP1O60336 1514 aa27.87■■■□□ 2.05
SDC2-205ENST00000520233 ASXL2Q76L83 1435 aa27.86■■■□□ 2.05
SDC2-205ENST00000520233 WDR7Q9Y4E6 1490 aa27.83■■■□□ 2.04
SDC2-205ENST00000520233 MTUS2Q5JR59 1369 aa27.8■■■□□ 2.04
SDC2-205ENST00000520233 TROQ12816 1431 aaPredicted RBP27.8■■■□□ 2.04
SDC2-205ENST00000520233 MAGI3Q5TCQ9 1506 aa27.8■■■□□ 2.04
SDC2-205ENST00000520233 LRRC9Q6ZRR7 1453 aa27.79■■■□□ 2.04
SDC2-205ENST00000520233 KANK4Q5T7N3 995 aaPredicted RBP27.78■■■□□ 2.04
SDC2-205ENST00000520233 EHBP1L1Q8N3D4 1523 aa27.77■■■□□ 2.04
SDC2-205ENST00000520233 KCNH8Q96L42 1107 aa27.72■■■□□ 2.03
SDC2-205ENST00000520233 ABCC10Q5T3U5 1492 aa27.68■■■□□ 2.02
SDC2-205ENST00000520233 KIF14Q15058 1648 aa27.67■■■□□ 2.02
SDC2-205ENST00000520233 DIP2BQ9P265 1576 aa27.63■■■□□ 2.01
SDC2-205ENST00000520233 SUPT6HQ7KZ85 1726 aaKnown RBP27.63■■■□□ 2.01
SDC2-205ENST00000520233 GLI2P10070 1586 aa27.62■■■□□ 2.01
SDC2-205ENST00000520233 PPARGC1BQ86YN6 1023 aaKnown RBP27.62■■■□□ 2.01
SDC2-205ENST00000520233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.61■■■□□ 2.01
SDC2-205ENST00000520233 NCOA2Q15596 1464 aa27.6■■■□□ 2.01
SDC2-205ENST00000520233 FAM69CQ0P6D2 419 aa27.6■■■□□ 2.01
SDC2-205ENST00000520233 ABCA9Q8IUA7 1624 aa27.59■■■□□ 2.01
SDC2-205ENST00000520233 TTC37Q6PGP7 1564 aa27.56■■■□□ 2
SDC2-205ENST00000520233 CCNB3Q8WWL7 1395 aa27.53■■■□□ 2
SDC2-205ENST00000520233 KIF13AQ9H1H9 1805 aa27.52■■■□□ 2
SDC2-205ENST00000520233 CD109Q6YHK3 1445 aa27.5■■□□□ 1.99
SDC2-205ENST00000520233 MAP3K4Q9Y6R4 1608 aa27.5■■□□□ 1.99
SDC2-205ENST00000520233 TRHP20396 242 aaPredicted RBP27.5■■□□□ 1.99
SDC2-205ENST00000520233 GPATCH8Q9UKJ3 1502 aaKnown RBP27.49■■□□□ 1.99
SDC2-205ENST00000520233 PHLDB1Q86UU1 1377 aa27.48■■□□□ 1.99
SDC2-205ENST00000520233 PLCH2O75038 1416 aa27.48■■□□□ 1.99
SDC2-205ENST00000520233 MYO5CQ9NQX4 1742 aa27.45■■□□□ 1.99
SDC2-205ENST00000520233 MYOM3Q5VTT5 1437 aa27.45■■□□□ 1.98
SDC2-205ENST00000520233 CDC42BPAQ5VT25 1732 aa27.44■■□□□ 1.98
SDC2-205ENST00000520233 ARAP3Q8WWN8 1544 aa27.43■■□□□ 1.98
SDC2-205ENST00000520233 PREX2Q70Z35 1606 aa27.43■■□□□ 1.98
SDC2-205ENST00000520233 ITSN2Q9NZM3 1697 aa27.43■■□□□ 1.98
SDC2-205ENST00000520233 CFDP1Q9UEE9 299 aaPredicted RBP27.4■■□□□ 1.98
SDC2-205ENST00000520233 MIA2Q96PC5 1412 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms