RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 CUL7Q14999 1698 aa20.85■□□□□ 0.93
POLB-208ENST00000520008 JPH4Q96JJ6 628 aa20.84■□□□□ 0.93
POLB-208ENST00000520008 KIF13AQ9H1H9 1805 aa20.82■□□□□ 0.92
POLB-208ENST00000520008 IGF1RP08069 1367 aa20.82■□□□□ 0.92
POLB-208ENST00000520008 KIF27Q86VH2 1401 aa20.81■□□□□ 0.92
POLB-208ENST00000520008 KIAA0586Q9BVV6 1533 aa20.79■□□□□ 0.92
POLB-208ENST00000520008 ADCY10Q96PN6 1610 aa20.74■□□□□ 0.91
POLB-208ENST00000520008 MAPKBP1O60336 1514 aa20.73■□□□□ 0.91
POLB-208ENST00000520008 ABCC10Q5T3U5 1492 aa20.68■□□□□ 0.9
POLB-208ENST00000520008 DIP2BQ9P265 1576 aa20.66■□□□□ 0.9
POLB-208ENST00000520008 CARMIL1Q5VZK9 1371 aa20.65■□□□□ 0.9
POLB-208ENST00000520008 IQGAP2Q13576 1575 aa20.6■□□□□ 0.89
POLB-208ENST00000520008 NPM1P06748 294 aaKnown RBP eCLIP20.56■□□□□ 0.88
POLB-208ENST00000520008 FAM69CQ0P6D2 419 aa20.55■□□□□ 0.88
POLB-208ENST00000520008 PTPRGP23470 1445 aa20.54■□□□□ 0.88
POLB-208ENST00000520008 TNIKQ9UKE5 1360 aa20.53■□□□□ 0.88
POLB-208ENST00000520008 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
POLB-208ENST00000520008 CARMIL2Q6F5E8 1435 aa20.53■□□□□ 0.88
POLB-208ENST00000520008 ABCC2Q92887 1545 aa20.51■□□□□ 0.87
POLB-208ENST00000520008 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
POLB-208ENST00000520008 UHRF1BP1LA0JNW5 1464 aa20.49■□□□□ 0.87
POLB-208ENST00000520008 UGGT2Q9NYU1 1516 aa20.48■□□□□ 0.87
POLB-208ENST00000520008 KDM6BO15054 1643 aa20.45■□□□□ 0.86
POLB-208ENST00000520008 KIAA0556O60303 1618 aa20.44■□□□□ 0.86
POLB-208ENST00000520008 TSPOAP1O95153 1857 aa20.43■□□□□ 0.86
POLB-208ENST00000520008 GLI2P10070 1586 aa20.42■□□□□ 0.86
POLB-208ENST00000520008 UACAQ9BZF9 1416 aa20.42■□□□□ 0.86
POLB-208ENST00000520008 ASXL2Q76L83 1435 aa20.41■□□□□ 0.86
POLB-208ENST00000520008 PPRC1Q5VV67 1664 aaKnown RBP20.41■□□□□ 0.86
POLB-208ENST00000520008 PLB1Q6P1J6 1458 aa20.4■□□□□ 0.86
POLB-208ENST00000520008 KDM5BQ9UGL1 1544 aa20.4■□□□□ 0.86
POLB-208ENST00000520008 CTTNBP2Q8WZ74 1663 aa20.39■□□□□ 0.86
POLB-208ENST00000520008 TTBK1Q5TCY1 1321 aaPredicted RBP20.37■□□□□ 0.85
POLB-208ENST00000520008 ZCCHC11Q5TAX3 1644 aaKnown RBP20.35■□□□□ 0.85
POLB-208ENST00000520008 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
POLB-208ENST00000520008 MAP3K4Q9Y6R4 1608 aa20.32■□□□□ 0.84
POLB-208ENST00000520008 EPRSP07814 1512 aaKnown RBP20.32■□□□□ 0.84
POLB-208ENST00000520008 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
POLB-208ENST00000520008 ABCA8O94911 1581 aa20.25■□□□□ 0.83
POLB-208ENST00000520008 WDR7Q9Y4E6 1490 aa20.23■□□□□ 0.83
POLB-208ENST00000520008 COL17A1Q9UMD9 1497 aaPredicted RBP20.22■□□□□ 0.83
POLB-208ENST00000520008 KDM4FA0A1W2PPD8 638 aa20.21■□□□□ 0.83
POLB-208ENST00000520008 TEX14Q8IWB6 1497 aa20.19■□□□□ 0.82
POLB-208ENST00000520008 CFAP43Q8NDM7 1665 aa20.15■□□□□ 0.82
POLB-208ENST00000520008 SAMD9Q5K651 1589 aa20.12■□□□□ 0.81
POLB-208ENST00000520008 MAGI3Q5TCQ9 1506 aa20.12■□□□□ 0.81
POLB-208ENST00000520008 ADGRL1O94910 1474 aa20.08■□□□□ 0.81
POLB-208ENST00000520008 CD109Q6YHK3 1445 aa20.06■□□□□ 0.8
POLB-208ENST00000520008 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
POLB-208ENST00000520008 ATP10BO94823 1461 aa20.04■□□□□ 0.8
POLB-208ENST00000520008 EEA1Q15075 1411 aa20.02■□□□□ 0.8
POLB-208ENST00000520008 RAPGEF6Q8TEU7 1601 aa20.01■□□□□ 0.79
POLB-208ENST00000520008 ABCA9Q8IUA7 1624 aa20■□□□□ 0.79
POLB-208ENST00000520008 KCNH8Q96L42 1107 aa19.98■□□□□ 0.79
POLB-208ENST00000520008 ARAP3Q8WWN8 1544 aa19.97■□□□□ 0.79
POLB-208ENST00000520008 P3H3Q8IVL6 736 aa19.96■□□□□ 0.79
POLB-208ENST00000520008 NUP153P49790 1475 aaKnown RBP19.94■□□□□ 0.78
POLB-208ENST00000520008 KIF21BO75037 1637 aa19.92■□□□□ 0.78
POLB-208ENST00000520008 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
POLB-208ENST00000520008 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
POLB-208ENST00000520008 FHOD3Q2V2M9 1422 aa19.89■□□□□ 0.77
POLB-208ENST00000520008 EFCAB5A4FU69 1503 aa19.88■□□□□ 0.77
POLB-208ENST00000520008 PHLDB1Q86UU1 1377 aa19.87■□□□□ 0.77
POLB-208ENST00000520008 NEO1Q92859 1461 aa19.86■□□□□ 0.77
POLB-208ENST00000520008 FRMPD1Q5SYB0 1578 aa19.84■□□□□ 0.77
POLB-208ENST00000520008 HECW2Q9P2P5 1572 aa19.84■□□□□ 0.77
POLB-208ENST00000520008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.76■□□□□ 0.75
POLB-208ENST00000520008 ADAMTSL3P82987 1691 aa19.76■□□□□ 0.75
POLB-208ENST00000520008 RANGAP1P46060 587 aaPredicted RBP19.76■□□□□ 0.75
POLB-208ENST00000520008 TTC37Q6PGP7 1564 aa19.75■□□□□ 0.75
POLB-208ENST00000520008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
POLB-208ENST00000520008 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
POLB-208ENST00000520008 RICTORQ6R327 1708 aa19.75■□□□□ 0.75
POLB-208ENST00000520008 RAPGEF3O95398 923 aa19.74■□□□□ 0.75
POLB-208ENST00000520008 CFAP74Q9C0B2 1584 aa19.73■□□□□ 0.75
POLB-208ENST00000520008 ARHGEF40Q8TER5 1519 aa19.72■□□□□ 0.75
POLB-208ENST00000520008 CDK13Q14004 1512 aaKnown RBP19.71■□□□□ 0.75
POLB-208ENST00000520008 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
POLB-208ENST00000520008 BCORL1Q5H9F3 1711 aa19.71■□□□□ 0.75
POLB-208ENST00000520008 PLEKHD1A6NEE1 506 aa19.7■□□□□ 0.74
POLB-208ENST00000520008 FANCAO15360 1455 aa19.7■□□□□ 0.74
POLB-208ENST00000520008 AKNAQ7Z591 1439 aa19.68■□□□□ 0.74
POLB-208ENST00000520008 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
POLB-208ENST00000520008 ZMYM4Q5VZL5 1548 aa19.68■□□□□ 0.74
POLB-208ENST00000520008 DENND4BO75064 1496 aaPredicted RBP19.67■□□□□ 0.74
POLB-208ENST00000520008 PTPRMP28827 1452 aa19.67■□□□□ 0.74
POLB-208ENST00000520008 HECW1Q76N89 1606 aa19.67■□□□□ 0.74
POLB-208ENST00000520008 MADDQ8WXG6 1647 aa19.65■□□□□ 0.74
POLB-208ENST00000520008 FMN1Q68DA7 1419 aa19.65■□□□□ 0.74
POLB-208ENST00000520008 SIGLEC1Q9BZZ2 1709 aa19.62■□□□□ 0.73
POLB-208ENST00000520008 PLCH2O75038 1416 aa19.6■□□□□ 0.73
POLB-208ENST00000520008 LRRIQ1Q96JM4 1722 aa19.6■□□□□ 0.73
POLB-208ENST00000520008 UBTFP17480 764 aaKnown RBP19.59■□□□□ 0.73
POLB-208ENST00000520008 ILDR1Q86SU0 546 aaPredicted RBP19.59■□□□□ 0.73
POLB-208ENST00000520008 MAGI2Q86UL8 1455 aa19.59■□□□□ 0.73
POLB-208ENST00000520008 MYO5CQ9NQX4 1742 aa19.59■□□□□ 0.73
POLB-208ENST00000520008 ZFYVE16Q7Z3T8 1539 aa19.58■□□□□ 0.73
POLB-208ENST00000520008 POGZQ7Z3K3 1410 aa19.58■□□□□ 0.72
POLB-208ENST00000520008 KIF14Q15058 1648 aa19.58■□□□□ 0.72
POLB-208ENST00000520008 YEATS2Q9ULM3 1422 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms