RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 NUP160Q12769 1436 aa28.12■■■□□ 2.09
IGHV3-52-201ENST00000519770 KIAA0586Q9BVV6 1533 aa28.11■■■□□ 2.09
IGHV3-52-201ENST00000519770 RANGAP1P46060 587 aaPredicted RBP28.1■■■□□ 2.09
IGHV3-52-201ENST00000519770 CEP170Q5SW79 1584 aa28.08■■■□□ 2.09
IGHV3-52-201ENST00000519770 OSCARQ8IYS5 282 aa28.07■■■□□ 2.08
IGHV3-52-201ENST00000519770 IQGAP2Q13576 1575 aa28.06■■■□□ 2.08
IGHV3-52-201ENST00000519770 CEP162Q5TB80 1403 aa28.03■■■□□ 2.08
IGHV3-52-201ENST00000519770 CLIP1P30622 1438 aa28■■■□□ 2.07
IGHV3-52-201ENST00000519770 JPH4Q96JJ6 628 aa27.95■■■□□ 2.06
IGHV3-52-201ENST00000519770 EFCAB5A4FU69 1503 aa27.9■■■□□ 2.06
IGHV3-52-201ENST00000519770 UGGT2Q9NYU1 1516 aa27.9■■■□□ 2.06
IGHV3-52-201ENST00000519770 CLASP1Q7Z460 1538 aa27.88■■■□□ 2.05
IGHV3-52-201ENST00000519770 CARMIL2Q6F5E8 1435 aa27.88■■■□□ 2.05
IGHV3-52-201ENST00000519770 P3H3Q8IVL6 736 aa27.84■■■□□ 2.05
IGHV3-52-201ENST00000519770 ARHGAP35Q9NRY4 1499 aa27.82■■■□□ 2.04
IGHV3-52-201ENST00000519770 PRG4Q92954 1404 aaPredicted RBP27.81■■■□□ 2.04
IGHV3-52-201ENST00000519770 SAMD9Q5K651 1589 aa27.78■■■□□ 2.04
IGHV3-52-201ENST00000519770 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
IGHV3-52-201ENST00000519770 KIAA0556O60303 1618 aa27.74■■■□□ 2.03
IGHV3-52-201ENST00000519770 DISP1Q96F81 1524 aa27.73■■■□□ 2.03
IGHV3-52-201ENST00000519770 FHOD3Q2V2M9 1422 aa27.73■■■□□ 2.03
IGHV3-52-201ENST00000519770 ARAP1Q96P48 1450 aa27.7■■■□□ 2.02
IGHV3-52-201ENST00000519770 FMN1Q68DA7 1419 aa27.69■■■□□ 2.02
IGHV3-52-201ENST00000519770 TTBK1Q5TCY1 1321 aaPredicted RBP27.67■■■□□ 2.02
IGHV3-52-201ENST00000519770 VPS8Q8N3P4 1428 aa27.65■■■□□ 2.02
IGHV3-52-201ENST00000519770 PTPRGP23470 1445 aa27.61■■■□□ 2.01
IGHV3-52-201ENST00000519770 APLP2Q06481 763 aa27.58■■■□□ 2.01
IGHV3-52-201ENST00000519770 ATP1B4Q9UN42 357 aaPredicted RBP27.58■■■□□ 2.01
IGHV3-52-201ENST00000519770 ERCC6L2Q5T890 1561 aa27.55■■■□□ 2
IGHV3-52-201ENST00000519770 CASKIN1Q8WXD9 1431 aa27.5■■□□□ 1.99
IGHV3-52-201ENST00000519770 ARHGEF11O15085 1522 aa27.48■■□□□ 1.99
IGHV3-52-201ENST00000519770 FYCO1Q9BQS8 1478 aa27.47■■□□□ 1.99
IGHV3-52-201ENST00000519770 PCF11O94913 1555 aaKnown RBP27.44■■□□□ 1.98
IGHV3-52-201ENST00000519770 RAPGEF6Q8TEU7 1601 aa27.43■■□□□ 1.98
IGHV3-52-201ENST00000519770 UACAQ9BZF9 1416 aa27.41■■□□□ 1.98
IGHV3-52-201ENST00000519770 HECW1Q76N89 1606 aa27.41■■□□□ 1.98
IGHV3-52-201ENST00000519770 PLB1Q6P1J6 1458 aa27.4■■□□□ 1.98
IGHV3-52-201ENST00000519770 RIMBP3CA6NJZ7 1639 aa27.38■■□□□ 1.97
IGHV3-52-201ENST00000519770 RIMBP3BA6NNM3 1639 aa27.38■■□□□ 1.97
IGHV3-52-201ENST00000519770 RIMBP3Q9UFD9 1639 aa27.38■■□□□ 1.97
IGHV3-52-201ENST00000519770 ABCA8O94911 1581 aa27.37■■□□□ 1.97
IGHV3-52-201ENST00000519770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.36■■□□□ 1.97
IGHV3-52-201ENST00000519770 HNRNPUL2Q1KMD3 747 aaKnown RBP27.36■■□□□ 1.97
IGHV3-52-201ENST00000519770 CCDC18Q5T9S5 1454 aa27.35■■□□□ 1.97
IGHV3-52-201ENST00000519770 ABCC2Q92887 1545 aa27.31■■□□□ 1.96
IGHV3-52-201ENST00000519770 UHRF1BP1LA0JNW5 1464 aa27.31■■□□□ 1.96
IGHV3-52-201ENST00000519770 ARID3CA6NKF2 412 aa27.3■■□□□ 1.96
IGHV3-52-201ENST00000519770 CYB5RLQ6IPT4 315 aa27.3■■□□□ 1.96
IGHV3-52-201ENST00000519770 CDK11AQ9UQ88 783 aaPredicted RBP27.3■■□□□ 1.96
IGHV3-52-201ENST00000519770 NUP153P49790 1475 aaKnown RBP27.29■■□□□ 1.96
IGHV3-52-201ENST00000519770 EPRSP07814 1512 aaKnown RBP27.28■■□□□ 1.96
IGHV3-52-201ENST00000519770 MAP3K1Q13233 1512 aa27.28■■□□□ 1.96
IGHV3-52-201ENST00000519770 NPM1P06748 294 aaKnown RBP eCLIP27.28■■□□□ 1.96
IGHV3-52-201ENST00000519770 TIAM1Q13009 1591 aa27.24■■□□□ 1.95
IGHV3-52-201ENST00000519770 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
IGHV3-52-201ENST00000519770 CFAP43Q8NDM7 1665 aa27.21■■□□□ 1.95
IGHV3-52-201ENST00000519770 CDK13Q14004 1512 aaKnown RBP27.2■■□□□ 1.94
IGHV3-52-201ENST00000519770 MTUS2Q5JR59 1369 aa27.19■■□□□ 1.94
IGHV3-52-201ENST00000519770 ATP10BO94823 1461 aa27.19■■□□□ 1.94
IGHV3-52-201ENST00000519770 PLEKHD1A6NEE1 506 aa27.18■■□□□ 1.94
IGHV3-52-201ENST00000519770 ADCY10Q96PN6 1610 aa27.18■■□□□ 1.94
IGHV3-52-201ENST00000519770 PPARGC1BQ86YN6 1023 aaKnown RBP27.17■■□□□ 1.94
IGHV3-52-201ENST00000519770 LRRIQ1Q96JM4 1722 aa27.16■■□□□ 1.94
IGHV3-52-201ENST00000519770 KDM5BQ9UGL1 1544 aa27.16■■□□□ 1.94
IGHV3-52-201ENST00000519770 LRRC9Q6ZRR7 1453 aa27.13■■□□□ 1.93
IGHV3-52-201ENST00000519770 KANK4Q5T7N3 995 aaPredicted RBP27.12■■□□□ 1.93
IGHV3-52-201ENST00000519770 ZCCHC11Q5TAX3 1644 aaKnown RBP27.1■■□□□ 1.93
IGHV3-52-201ENST00000519770 EHBP1L1Q8N3D4 1523 aa27.09■■□□□ 1.93
IGHV3-52-201ENST00000519770 TROQ12816 1431 aaPredicted RBP27.05■■□□□ 1.92
IGHV3-52-201ENST00000519770 SUPT6HQ7KZ85 1726 aaKnown RBP26.99■■□□□ 1.91
IGHV3-52-201ENST00000519770 MAGI3Q5TCQ9 1506 aa26.98■■□□□ 1.91
IGHV3-52-201ENST00000519770 KCNH8Q96L42 1107 aa26.97■■□□□ 1.91
IGHV3-52-201ENST00000519770 ASXL2Q76L83 1435 aa26.96■■□□□ 1.91
IGHV3-52-201ENST00000519770 WDR7Q9Y4E6 1490 aa26.95■■□□□ 1.91
IGHV3-52-201ENST00000519770 KIF14Q15058 1648 aa26.94■■□□□ 1.9
IGHV3-52-201ENST00000519770 NCOA2Q15596 1464 aa26.92■■□□□ 1.9
IGHV3-52-201ENST00000519770 MAPKBP1O60336 1514 aa26.9■■□□□ 1.9
IGHV3-52-201ENST00000519770 CCNB3Q8WWL7 1395 aa26.88■■□□□ 1.89
IGHV3-52-201ENST00000519770 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
IGHV3-52-201ENST00000519770 PHLDB1Q86UU1 1377 aa26.81■■□□□ 1.88
IGHV3-52-201ENST00000519770 MYOM3Q5VTT5 1437 aa26.8■■□□□ 1.88
IGHV3-52-201ENST00000519770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.76■■□□□ 1.87
IGHV3-52-201ENST00000519770 ABCC10Q5T3U5 1492 aa26.76■■□□□ 1.87
IGHV3-52-201ENST00000519770 CFDP1Q9UEE9 299 aaPredicted RBP26.76■■□□□ 1.87
IGHV3-52-201ENST00000519770 ITSN2Q9NZM3 1697 aa26.76■■□□□ 1.87
IGHV3-52-201ENST00000519770 MIA2Q96PC5 1412 aa26.73■■□□□ 1.87
IGHV3-52-201ENST00000519770 GPATCH8Q9UKJ3 1502 aaKnown RBP26.72■■□□□ 1.87
IGHV3-52-201ENST00000519770 FGD6Q6ZV73 1430 aa26.72■■□□□ 1.87
IGHV3-52-201ENST00000519770 FAM50AQ14320 339 aaKnown RBP26.71■■□□□ 1.87
IGHV3-52-201ENST00000519770 TTC37Q6PGP7 1564 aa26.71■■□□□ 1.87
IGHV3-52-201ENST00000519770 ABCA9Q8IUA7 1624 aa26.7■■□□□ 1.86
IGHV3-52-201ENST00000519770 FAM69CQ0P6D2 419 aa26.7■■□□□ 1.86
IGHV3-52-201ENST00000519770 MYO5CQ9NQX4 1742 aa26.69■■□□□ 1.86
IGHV3-52-201ENST00000519770 RRBP1Q9P2E9 1410 aaKnown RBP26.69■■□□□ 1.86
IGHV3-52-201ENST00000519770 ZNF777Q9ULD5 760 aaPredicted RBP26.68■■□□□ 1.86
IGHV3-52-201ENST00000519770 EFCAB2Q5VUJ9 269 aa26.67■■□□□ 1.86
IGHV3-52-201ENST00000519770 PLCH2O75038 1416 aa26.66■■□□□ 1.86
IGHV3-52-201ENST00000519770 CD109Q6YHK3 1445 aa26.66■■□□□ 1.86
IGHV3-52-201ENST00000519770 ARHGAP5Q13017 1502 aa26.66■■□□□ 1.86
IGHV3-52-201ENST00000519770 CDC42BPAQ5VT25 1732 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms