RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 CARMIL1Q5VZK9 1371 aa36.58■■■■□ 3.45
ARFGEF1-206ENST00000519436 CUL7Q14999 1698 aa36.57■■■■□ 3.44
ARFGEF1-206ENST00000519436 RUSC2Q8N2Y8 1516 aa36.56■■■■□ 3.44
ARFGEF1-206ENST00000519436 KIAA0586Q9BVV6 1533 aa36.53■■■■□ 3.44
ARFGEF1-206ENST00000519436 RAPGEF2Q9Y4G8 1499 aa36.24■■■■□ 3.39
ARFGEF1-206ENST00000519436 IQGAP2Q13576 1575 aa36.14■■■■□ 3.38
ARFGEF1-206ENST00000519436 PTPRGP23470 1445 aa36.12■■■■□ 3.37
ARFGEF1-206ENST00000519436 CARMIL2Q6F5E8 1435 aa36.1■■■■□ 3.37
ARFGEF1-206ENST00000519436 TNIKQ9UKE5 1360 aa36.08■■■■□ 3.37
ARFGEF1-206ENST00000519436 NPM1P06748 294 aaKnown RBP eCLIP36.08■■■■□ 3.37
ARFGEF1-206ENST00000519436 ADCY10Q96PN6 1610 aa36.07■■■■□ 3.36
ARFGEF1-206ENST00000519436 PRXQ9BXM0 1461 aa36.05■■■■□ 3.36
ARFGEF1-206ENST00000519436 DISP1Q96F81 1524 aa36.03■■■■□ 3.36
ARFGEF1-206ENST00000519436 UGGT2Q9NYU1 1516 aa36■■■■□ 3.35
ARFGEF1-206ENST00000519436 TTBK1Q5TCY1 1321 aaPredicted RBP35.98■■■■□ 3.35
ARFGEF1-206ENST00000519436 MAPKBP1O60336 1514 aa35.98■■■■□ 3.35
ARFGEF1-206ENST00000519436 ABCC10Q5T3U5 1492 aa35.93■■■■□ 3.34
ARFGEF1-206ENST00000519436 FAM69CQ0P6D2 419 aa35.91■■■■□ 3.34
ARFGEF1-206ENST00000519436 CSRNP3Q8WYN3 585 aa35.9■■■■□ 3.34
ARFGEF1-206ENST00000519436 KIF13AQ9H1H9 1805 aa35.87■■■■□ 3.33
ARFGEF1-206ENST00000519436 UHRF1BP1LA0JNW5 1464 aa35.85■■■■□ 3.33
ARFGEF1-206ENST00000519436 UACAQ9BZF9 1416 aa35.84■■■■□ 3.33
ARFGEF1-206ENST00000519436 ABCC2Q92887 1545 aa35.83■■■■□ 3.33
ARFGEF1-206ENST00000519436 KIAA0556O60303 1618 aa35.81■■■■□ 3.32
ARFGEF1-206ENST00000519436 DIP2BQ9P265 1576 aa35.77■■■■□ 3.32
ARFGEF1-206ENST00000519436 CTTNBP2Q8WZ74 1663 aa35.75■■■■□ 3.31
ARFGEF1-206ENST00000519436 EEA1Q15075 1411 aa35.74■■■■□ 3.31
ARFGEF1-206ENST00000519436 GOLGA3Q08378 1498 aa35.71■■■■□ 3.31
ARFGEF1-206ENST00000519436 ASXL2Q76L83 1435 aa35.68■■■■□ 3.3
ARFGEF1-206ENST00000519436 KDM5BQ9UGL1 1544 aa35.67■■■■□ 3.3
ARFGEF1-206ENST00000519436 PLB1Q6P1J6 1458 aa35.65■■■■□ 3.3
ARFGEF1-206ENST00000519436 CHIC1Q5VXU3 224 aa35.63■■■■□ 3.29
ARFGEF1-206ENST00000519436 FAM9AQ8IZU1 332 aaPredicted RBP35.6■■■■□ 3.29
ARFGEF1-206ENST00000519436 ABCA8O94911 1581 aa35.51■■■■□ 3.28
ARFGEF1-206ENST00000519436 GLI2P10070 1586 aa35.51■■■■□ 3.28
ARFGEF1-206ENST00000519436 P3H3Q8IVL6 736 aa35.5■■■■□ 3.27
ARFGEF1-206ENST00000519436 ZCCHC11Q5TAX3 1644 aaKnown RBP35.49■■■■□ 3.27
ARFGEF1-206ENST00000519436 EPRSP07814 1512 aaKnown RBP35.47■■■■□ 3.27
ARFGEF1-206ENST00000519436 SAMD9Q5K651 1589 aa35.4■■■■□ 3.26
ARFGEF1-206ENST00000519436 TSPOAP1O95153 1857 aa35.39■■■■□ 3.26
ARFGEF1-206ENST00000519436 WDR7Q9Y4E6 1490 aa35.37■■■■□ 3.25
ARFGEF1-206ENST00000519436 KIF21BO75037 1637 aa35.35■■■■□ 3.25
ARFGEF1-206ENST00000519436 PPRC1Q5VV67 1664 aaKnown RBP35.31■■■■□ 3.24
ARFGEF1-206ENST00000519436 KDM6BO15054 1643 aa35.31■■■■□ 3.24
ARFGEF1-206ENST00000519436 RANGAP1P46060 587 aaPredicted RBP35.29■■■■□ 3.24
ARFGEF1-206ENST00000519436 ATP10BO94823 1461 aa35.29■■■■□ 3.24
ARFGEF1-206ENST00000519436 MAP3K4Q9Y6R4 1608 aa35.27■■■■□ 3.24
ARFGEF1-206ENST00000519436 KCNH8Q96L42 1107 aa35.25■■■■□ 3.23
ARFGEF1-206ENST00000519436 ARID3CA6NKF2 412 aa35.23■■■■□ 3.23
ARFGEF1-206ENST00000519436 FHOD3Q2V2M9 1422 aa35.22■■■■□ 3.23
ARFGEF1-206ENST00000519436 AEBP2Q6ZN18 517 aaPredicted RBP35.2■■■■□ 3.23
ARFGEF1-206ENST00000519436 COL17A1Q9UMD9 1497 aaPredicted RBP35.2■■■■□ 3.23
ARFGEF1-206ENST00000519436 TEX14Q8IWB6 1497 aa35.16■■■■□ 3.22
ARFGEF1-206ENST00000519436 UBTFP17480 764 aaKnown RBP35.15■■■■□ 3.22
ARFGEF1-206ENST00000519436 EHMT2Q96KQ7 1210 aa35.15■■■■□ 3.22
ARFGEF1-206ENST00000519436 CD109Q6YHK3 1445 aa35.15■■■■□ 3.22
ARFGEF1-206ENST00000519436 RAPGEF6Q8TEU7 1601 aa35.14■■■■□ 3.22
ARFGEF1-206ENST00000519436 NUP153P49790 1475 aaKnown RBP35.11■■■■□ 3.21
ARFGEF1-206ENST00000519436 EFCAB5A4FU69 1503 aa35.11■■■■□ 3.21
ARFGEF1-206ENST00000519436 MAGI3Q5TCQ9 1506 aa35.11■■■■□ 3.21
ARFGEF1-206ENST00000519436 CFAP43Q8NDM7 1665 aa35.04■■■■□ 3.2
ARFGEF1-206ENST00000519436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.02■■■■□ 3.2
ARFGEF1-206ENST00000519436 HNRNPUL2Q1KMD3 747 aaKnown RBP35.02■■■■□ 3.2
ARFGEF1-206ENST00000519436 KDM4FA0A1W2PPD8 638 aa34.98■■■■□ 3.19
ARFGEF1-206ENST00000519436 ARHGAP35Q9NRY4 1499 aa34.95■■■■□ 3.19
ARFGEF1-206ENST00000519436 PLEKHD1A6NEE1 506 aa34.91■■■■□ 3.18
ARFGEF1-206ENST00000519436 ABCA9Q8IUA7 1624 aa34.91■■■■□ 3.18
ARFGEF1-206ENST00000519436 FMN1Q68DA7 1419 aa34.84■■■■□ 3.17
ARFGEF1-206ENST00000519436 ARAP3Q8WWN8 1544 aa34.82■■■■□ 3.16
ARFGEF1-206ENST00000519436 PHLDB1Q86UU1 1377 aa34.82■■■■□ 3.16
ARFGEF1-206ENST00000519436 CDK13Q14004 1512 aaKnown RBP34.76■■■■□ 3.15
ARFGEF1-206ENST00000519436 NEO1Q92859 1461 aa34.74■■■■□ 3.15
ARFGEF1-206ENST00000519436 ATP1B4Q9UN42 357 aaPredicted RBP34.72■■■■□ 3.15
ARFGEF1-206ENST00000519436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.68■■■■□ 3.146e-6■■□□□ 13.3
ARFGEF1-206ENST00000519436 ADGRL1O94910 1474 aa34.67■■■■□ 3.14
ARFGEF1-206ENST00000519436 RAPGEF3O95398 923 aa34.67■■■■□ 3.14
ARFGEF1-206ENST00000519436 HECW1Q76N89 1606 aa34.65■■■■□ 3.14
ARFGEF1-206ENST00000519436 CDK11AQ9UQ88 783 aaPredicted RBP34.6■■■■□ 3.13
ARFGEF1-206ENST00000519436 TTC37Q6PGP7 1564 aa34.57■■■■□ 3.13
ARFGEF1-206ENST00000519436 AKNAQ7Z591 1439 aa34.57■■■■□ 3.13
ARFGEF1-206ENST00000519436 FANCAO15360 1455 aa34.55■■■■□ 3.12
ARFGEF1-206ENST00000519436 CASKIN1Q8WXD9 1431 aa34.55■■■■□ 3.12
ARFGEF1-206ENST00000519436 PLCH2O75038 1416 aa34.54■■■■□ 3.12
ARFGEF1-206ENST00000519436 CLIP1P30622 1438 aa34.52■■■■□ 3.12
ARFGEF1-206ENST00000519436 TROQ12816 1431 aaPredicted RBP34.51■■■■□ 3.12
ARFGEF1-206ENST00000519436 FRMPD1Q5SYB0 1578 aa34.49■■■■□ 3.11
ARFGEF1-206ENST00000519436 DENND4BO75064 1496 aaPredicted RBP34.49■■■■□ 3.11
ARFGEF1-206ENST00000519436 LRRIQ1Q96JM4 1722 aa34.44■■■■□ 3.1
ARFGEF1-206ENST00000519436 PCF11O94913 1555 aaKnown RBP34.43■■■■□ 3.1
ARFGEF1-206ENST00000519436 CFAP74Q9C0B2 1584 aa34.41■■■■□ 3.1
ARFGEF1-206ENST00000519436 EFCAB2Q5VUJ9 269 aa34.4■■■■□ 3.1
ARFGEF1-206ENST00000519436 KIF14Q15058 1648 aa34.4■■■■□ 3.1
ARFGEF1-206ENST00000519436 CCDC18Q5T9S5 1454 aa34.39■■■■□ 3.1
ARFGEF1-206ENST00000519436 FYCO1Q9BQS8 1478 aa34.37■■■■□ 3.09
ARFGEF1-206ENST00000519436 SCAPERQ9BY12 1400 aa34.37■■■■□ 3.09
ARFGEF1-206ENST00000519436 RICTORQ6R327 1708 aa34.36■■■■□ 3.09
ARFGEF1-206ENST00000519436 ZMYM4Q5VZL5 1548 aa34.29■■■■□ 3.08
ARFGEF1-206ENST00000519436 POGZQ7Z3K3 1410 aa34.28■■■■□ 3.08
ARFGEF1-206ENST00000519436 MYO5CQ9NQX4 1742 aa34.27■■■■□ 3.08
ARFGEF1-206ENST00000519436 MAGI2Q86UL8 1455 aa34.26■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms