RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 MAP3K4Q9Y6R4 1608 aa8.96□□□□□ -0.97
AP3B1-204ENST00000519295 DIP2BQ9P265 1576 aa8.95□□□□□ -0.98
AP3B1-204ENST00000519295 UHRF1BP1LA0JNW5 1464 aa8.95□□□□□ -0.98
AP3B1-204ENST00000519295 ARXQ96QS3 562 aa8.95□□□□□ -0.98
AP3B1-204ENST00000519295 RTN4Q9NQC3 1192 aaKnown RBP8.94□□□□□ -0.98
AP3B1-204ENST00000519295 ADCY10Q96PN6 1610 aa8.93□□□□□ -0.98
AP3B1-204ENST00000519295 TIMELESSQ9UNS1 1208 aa8.92□□□□□ -0.98
AP3B1-204ENST00000519295 SCAF1Q9H7N4 1312 aaKnown RBP8.92□□□□□ -0.98
AP3B1-204ENST00000519295 KLHL34Q8N239 644 aa8.91□□□□□ -0.98
AP3B1-204ENST00000519295 GAPVD1Q14C86 1478 aa8.91□□□□□ -0.98
AP3B1-204ENST00000519295 CTTNBP2Q8WZ74 1663 aa8.9□□□□□ -0.98
AP3B1-204ENST00000519295 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
AP3B1-204ENST00000519295 FHAD1B1AJZ9 1412 aa8.9□□□□□ -0.99
AP3B1-204ENST00000519295 KDM5BQ9UGL1 1544 aa8.89□□□□□ -0.99
AP3B1-204ENST00000519295 SOGA1O94964 1423 aa8.88□□□□□ -0.99
AP3B1-204ENST00000519295 EIF5BO60841 1220 aaKnown RBP8.87□□□□□ -0.99
AP3B1-204ENST00000519295 UGGT2Q9NYU1 1516 aa8.86□□□□□ -0.99
AP3B1-204ENST00000519295 HRCP23327 699 aa8.86□□□□□ -0.99
AP3B1-204ENST00000519295 RAD54L2Q9Y4B4 1467 aa8.86□□□□□ -0.99
AP3B1-204ENST00000519295 ERCC6L2Q5T890 1561 aa8.85□□□□□ -0.99
AP3B1-204ENST00000519295 AQRO60306 1485 aaKnown RBP eCLIP8.85□□□□□ -0.99
AP3B1-204ENST00000519295 CFAP43Q8NDM7 1665 aa8.84□□□□□ -0.99
AP3B1-204ENST00000519295 KIAA0586Q9BVV6 1533 aa8.83□□□□□ -1
AP3B1-204ENST00000519295 ABCC10Q5T3U5 1492 aa8.81□□□□□ -1
AP3B1-204ENST00000519295 UBE2Q2Q8WVN8 375 aa8.8□□□□□ -1
AP3B1-204ENST00000519295 SAMD9Q5K651 1589 aa8.79□□□□□ -1
AP3B1-204ENST00000519295 WRNQ14191 1432 aaPredicted RBP eCLIP8.78□□□□□ -1
AP3B1-204ENST00000519295 ABCA8O94911 1581 aa8.76□□□□□ -1.01
AP3B1-204ENST00000519295 KIAA0556O60303 1618 aa8.76□□□□□ -1.01
AP3B1-204ENST00000519295 ZCCHC11Q5TAX3 1644 aaKnown RBP8.74□□□□□ -1.01
AP3B1-204ENST00000519295 IQGAP2Q13576 1575 aa8.73□□□□□ -1.01
AP3B1-204ENST00000519295 AEBP2Q6ZN18 517 aaPredicted RBP8.73□□□□□ -1.01
AP3B1-204ENST00000519295 ABCC2Q92887 1545 aa8.73□□□□□ -1.01
AP3B1-204ENST00000519295 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
AP3B1-204ENST00000519295 DISP1Q96F81 1524 aa8.72□□□□□ -1.01
AP3B1-204ENST00000519295 MAGI3Q5TCQ9 1506 aa8.69□□□□□ -1.02
AP3B1-204ENST00000519295 ADAMTSL3P82987 1691 aa8.69□□□□□ -1.02
AP3B1-204ENST00000519295 REREQ9P2R6 1566 aa8.68□□□□□ -1.02
AP3B1-204ENST00000519295 ARAP3Q8WWN8 1544 aa8.68□□□□□ -1.02
AP3B1-204ENST00000519295 ZMYM4Q5VZL5 1548 aa8.67□□□□□ -1.02
AP3B1-204ENST00000519295 CFAP74Q9C0B2 1584 aa8.66□□□□□ -1.02
AP3B1-204ENST00000519295 FRMPD1Q5SYB0 1578 aa8.65□□□□□ -1.02
AP3B1-204ENST00000519295 RICTORQ6R327 1708 aa8.64□□□□□ -1.03
AP3B1-204ENST00000519295 KDM6BO15054 1643 aa8.63□□□□□ -1.03
AP3B1-204ENST00000519295 BCORL1Q5H9F3 1711 aa8.63□□□□□ -1.03
AP3B1-204ENST00000519295 PLB1Q6P1J6 1458 aa8.62□□□□□ -1.03
AP3B1-204ENST00000519295 PRXQ9BXM0 1461 aa8.61□□□□□ -1.03
AP3B1-204ENST00000519295 TDRD9Q8NDG6 1382 aaKnown RBP8.61□□□□□ -1.03
AP3B1-204ENST00000519295 KIF21BO75037 1637 aa8.6□□□□□ -1.03
AP3B1-204ENST00000519295 IGF1RP08069 1367 aa8.6□□□□□ -1.03
AP3B1-204ENST00000519295 EPRSP07814 1512 aaKnown RBP8.6□□□□□ -1.03
AP3B1-204ENST00000519295 PRG4Q92954 1404 aaPredicted RBP8.56□□□□□ -1.04
AP3B1-204ENST00000519295 KIF27Q86VH2 1401 aa8.56□□□□□ -1.04
AP3B1-204ENST00000519295 PHLDB1Q86UU1 1377 aa8.55□□□□□ -1.04
AP3B1-204ENST00000519295 MROH2AA6NES4 1674 aa8.55□□□□□ -1.04
AP3B1-204ENST00000519295 EFCAB5A4FU69 1503 aa8.55□□□□□ -1.04
AP3B1-204ENST00000519295 TEX14Q8IWB6 1497 aa8.54□□□□□ -1.04
AP3B1-204ENST00000519295 LRRIQ1Q96JM4 1722 aa8.54□□□□□ -1.04
AP3B1-204ENST00000519295 LOC105371045A0A1W2PR82 267 aa8.54□□□□□ -1.04
AP3B1-204ENST00000519295 ARHGEF40Q8TER5 1519 aa8.53□□□□□ -1.04
AP3B1-204ENST00000519295 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.04
AP3B1-204ENST00000519295 RAPGEF6Q8TEU7 1601 aa8.52□□□□□ -1.04
AP3B1-204ENST00000519295 GOLGA3Q08378 1498 aa8.52□□□□□ -1.05
AP3B1-204ENST00000519295 SIGLEC1Q9BZZ2 1709 aa8.52□□□□□ -1.05
AP3B1-204ENST00000519295 RAPGEF2Q9Y4G8 1499 aa8.51□□□□□ -1.05
AP3B1-204ENST00000519295 FAM135AQ9P2D6 1515 aa8.51□□□□□ -1.05
AP3B1-204ENST00000519295 TNIKQ9UKE5 1360 aa8.51□□□□□ -1.05
AP3B1-204ENST00000519295 FER1L4A9Z1Z3 1794 aa8.51□□□□□ -1.05
AP3B1-204ENST00000519295 KDM5CP41229 1560 aa8.5□□□□□ -1.05
AP3B1-204ENST00000519295 NEO1Q92859 1461 aa8.5□□□□□ -1.05
AP3B1-204ENST00000519295 ZNF142P52746 1687 aaPredicted RBP8.5□□□□□ -1.05
AP3B1-204ENST00000519295 WDR7Q9Y4E6 1490 aa8.5□□□□□ -1.05
AP3B1-204ENST00000519295 UACAQ9BZF9 1416 aa8.49□□□□□ -1.05
AP3B1-204ENST00000519295 ANO8Q9HCE9 1232 aaPredicted RBP8.47□□□□□ -1.05
AP3B1-204ENST00000519295 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
AP3B1-204ENST00000519295 KCNA4P22459 653 aa8.46□□□□□ -1.06
AP3B1-204ENST00000519295 EEA1Q15075 1411 aa8.45□□□□□ -1.06
AP3B1-204ENST00000519295 ITSN2Q9NZM3 1697 aa8.44□□□□□ -1.06
AP3B1-204ENST00000519295 ASXL2Q76L83 1435 aa8.44□□□□□ -1.06
AP3B1-204ENST00000519295 MAGI2Q86UL8 1455 aa8.44□□□□□ -1.06
AP3B1-204ENST00000519295 PREX1Q8TCU6 1659 aa8.44□□□□□ -1.06
AP3B1-204ENST00000519295 CARMIL2Q6F5E8 1435 aa8.43□□□□□ -1.06
AP3B1-204ENST00000519295 MYO5CQ9NQX4 1742 aa8.43□□□□□ -1.06
AP3B1-204ENST00000519295 IQSEC2Q5JU85 1478 aa8.43□□□□□ -1.06
AP3B1-204ENST00000519295 PCF11O94913 1555 aaKnown RBP8.43□□□□□ -1.06
AP3B1-204ENST00000519295 ARHGEF12Q9NZN5 1544 aa8.42□□□□□ -1.06
AP3B1-204ENST00000519295 TSPOAP1O95153 1857 aa8.42□□□□□ -1.06
AP3B1-204ENST00000519295 PREX2Q70Z35 1606 aa8.42□□□□□ -1.06
AP3B1-204ENST00000519295 AGLP35573 1532 aa8.41□□□□□ -1.06
AP3B1-204ENST00000519295 COL17A1Q9UMD9 1497 aaPredicted RBP8.41□□□□□ -1.06
AP3B1-204ENST00000519295 AMER1Q5JTC6 1135 aaPredicted RBP8.41□□□□□ -1.06
AP3B1-204ENST00000519295 PLXNC1O60486 1568 aa8.4□□□□□ -1.06
AP3B1-204ENST00000519295 CHMP7Q8WUX9 453 aaPredicted RBP8.4□□□□□ -1.06
AP3B1-204ENST00000519295 FHOD3Q2V2M9 1422 aa8.4□□□□□ -1.06
AP3B1-204ENST00000519295 HECW2Q9P2P5 1572 aa8.4□□□□□ -1.06
AP3B1-204ENST00000519295 TULP1O00294 542 aaPredicted RBP8.39□□□□□ -1.07
AP3B1-204ENST00000519295 TAOK2Q9UL54 1235 aa8.38□□□□□ -1.07
AP3B1-204ENST00000519295 CARMIL1Q5VZK9 1371 aa8.38□□□□□ -1.07
AP3B1-204ENST00000519295 KDM5AP29375 1690 aaKnown RBP8.38□□□□□ -1.07
AP3B1-204ENST00000519295 ADGRL1O94910 1474 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms