RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 NISCHQ9Y2I1 1504 aa12.81□□□□□ -0.36
AP3B1-204ENST00000519295 CCDC180Q9P1Z9 1646 aa12.11□□□□□ -0.47
AP3B1-204ENST00000519295 MYO15BQ96JP2 1530 aa11.39□□□□□ -0.59
AP3B1-204ENST00000519295 SHROOM4Q9ULL8 1493 aa11.19□□□□□ -0.62
AP3B1-204ENST00000519295 UNC13AQ9UPW8 1703 aa11.16□□□□□ -0.62
AP3B1-204ENST00000519295 NACADO15069 1562 aa11.14□□□□□ -0.63
AP3B1-204ENST00000519295 DCAF1Q9Y4B6 1507 aa11.12□□□□□ -0.63
AP3B1-204ENST00000519295 RB1CC1Q8TDY2 1594 aa11.08□□□□□ -0.64
AP3B1-204ENST00000519295 ABCC9O60706 1549 aa10.94□□□□□ -0.66
AP3B1-204ENST00000519295 BICRAQ9NZM4 1560 aa10.91□□□□□ -0.66
AP3B1-204ENST00000519295 ZCCHC6Q5VYS8 1495 aaKnown RBP10.74□□□□□ -0.69
AP3B1-204ENST00000519295 EIF4G1Q04637 1599 aaKnown RBP10.43□□□□□ -0.74
AP3B1-204ENST00000519295 PEG3Q9GZU2 1588 aa10.41□□□□□ -0.74
AP3B1-204ENST00000519295 CC2D2AQ9P2K1 1620 aa10.41□□□□□ -0.74
AP3B1-204ENST00000519295 SLC24A1O60721 1099 aa10.33□□□□□ -0.76
AP3B1-204ENST00000519295 HMGXB3Q12766 1538 aa10.28□□□□□ -0.76
AP3B1-204ENST00000519295 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
AP3B1-204ENST00000519295 SMARCA2P51531 1590 aa10.27□□□□□ -0.77
AP3B1-204ENST00000519295 APLP2Q06481 763 aa10.19□□□□□ -0.78
AP3B1-204ENST00000519295 PRKCSHP14314 528 aaPredicted RBP10.16□□□□□ -0.78
AP3B1-204ENST00000519295 SCRIBQ14160 1630 aa10.15□□□□□ -0.78
AP3B1-204ENST00000519295 PRDM2Q13029 1718 aa10.15□□□□□ -0.78
AP3B1-204ENST00000519295 CUX2O14529 1486 aa10.15□□□□□ -0.79
AP3B1-204ENST00000519295 NCAPD3P42695 1498 aa10.14□□□□□ -0.79
AP3B1-204ENST00000519295 THOC2Q8NI27 1593 aaKnown RBP10.11□□□□□ -0.79
AP3B1-204ENST00000519295 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
AP3B1-204ENST00000519295 SMARCA4P51532 1647 aa10.09□□□□□ -0.79
AP3B1-204ENST00000519295 LAMC3Q9Y6N6 1575 aa10.03□□□□□ -0.8
AP3B1-204ENST00000519295 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
AP3B1-204ENST00000519295 ATAD2BQ9ULI0 1458 aa9.93□□□□□ -0.82
AP3B1-204ENST00000519295 WDR62O43379 1518 aa9.9□□□□□ -0.82
AP3B1-204ENST00000519295 WDR97A6NE52 1622 aa9.88□□□□□ -0.83
AP3B1-204ENST00000519295 KIF21AQ7Z4S6 1674 aa9.86□□□□□ -0.83
AP3B1-204ENST00000519295 TTBK1Q5TCY1 1321 aaPredicted RBP9.78□□□□□ -0.84
AP3B1-204ENST00000519295 PELP1Q8IZL8 1130 aaKnown RBP9.78□□□□□ -0.84
AP3B1-204ENST00000519295 DAXXQ9UER7 740 aaPredicted RBP9.77□□□□□ -0.85
AP3B1-204ENST00000519295 PABPN1Q86U42 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
AP3B1-204ENST00000519295 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
AP3B1-204ENST00000519295 MROH2BQ7Z745 1585 aa9.67□□□□□ -0.86
AP3B1-204ENST00000519295 MYT1Q01538 1121 aa9.67□□□□□ -0.86
AP3B1-204ENST00000519295 DNAJC5Q9H3Z4 198 aa9.65□□□□□ -0.86
AP3B1-204ENST00000519295 BAZ1BQ9UIG0 1483 aaKnown RBP9.65□□□□□ -0.87
AP3B1-204ENST00000519295 CFTRP13569 1480 aa9.64□□□□□ -0.87
AP3B1-204ENST00000519295 MRC2Q9UBG0 1479 aa9.63□□□□□ -0.87
AP3B1-204ENST00000519295 WIZO95785 1651 aa9.59□□□□□ -0.87
AP3B1-204ENST00000519295 TARBP1Q13395 1621 aaKnown RBP9.57□□□□□ -0.88
AP3B1-204ENST00000519295 PDS5BQ9NTI5 1447 aa9.54□□□□□ -0.88
AP3B1-204ENST00000519295 CADPSQ9ULU8 1353 aa9.51□□□□□ -0.89
AP3B1-204ENST00000519295 NESP48681 1621 aa9.51□□□□□ -0.89
AP3B1-204ENST00000519295 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
AP3B1-204ENST00000519295 DNMBPQ6XZF7 1577 aa9.48□□□□□ -0.89
AP3B1-204ENST00000519295 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.89
AP3B1-204ENST00000519295 URB2Q14146 1524 aaKnown RBP9.46□□□□□ -0.9
AP3B1-204ENST00000519295 CEP164Q9UPV0 1460 aa9.43□□□□□ -0.9
AP3B1-204ENST00000519295 SHROOM2Q13796 1616 aa9.43□□□□□ -0.9
AP3B1-204ENST00000519295 EIF4G3O43432 1585 aaKnown RBP9.42□□□□□ -0.9
AP3B1-204ENST00000519295 BIVM-ERCC5R4GMW8 1640 aa9.41□□□□□ -0.9
AP3B1-204ENST00000519295 ERCC6Q03468 1493 aa9.41□□□□□ -0.9
AP3B1-204ENST00000519295 ABCA5Q8WWZ7 1642 aa9.4□□□□□ -0.9
AP3B1-204ENST00000519295 IFT140Q96RY7 1462 aa9.4□□□□□ -0.9
AP3B1-204ENST00000519295 RSF1Q96T23 1441 aaPredicted RBP9.4□□□□□ -0.91
AP3B1-204ENST00000519295 CHD1O14646 1710 aa9.4□□□□□ -0.91
AP3B1-204ENST00000519295 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
AP3B1-204ENST00000519295 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
AP3B1-204ENST00000519295 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
AP3B1-204ENST00000519295 FANCD2Q9BXW9 1451 aa9.39□□□□□ -0.91
AP3B1-204ENST00000519295 PBRM1Q86U86 1689 aa9.39□□□□□ -0.91
AP3B1-204ENST00000519295 TOPBP1Q92547 1522 aa9.33□□□□□ -0.92
AP3B1-204ENST00000519295 FAM9AQ8IZU1 332 aaPredicted RBP9.28□□□□□ -0.92
AP3B1-204ENST00000519295 NCBP3Q53F19 620 aaKnown RBP9.27□□□□□ -0.93
AP3B1-204ENST00000519295 CCDC88BA6NC98 1476 aa9.27□□□□□ -0.93
AP3B1-204ENST00000519295 MAGI1Q96QZ7 1491 aaPredicted RBP9.24□□□□□ -0.93
AP3B1-204ENST00000519295 ARHGEF11O15085 1522 aa9.21□□□□□ -0.94
AP3B1-204ENST00000519295 ERICH6Q7L0X2 663 aa9.21□□□□□ -0.94
AP3B1-204ENST00000519295 TOP2BQ02880 1626 aa9.21□□□□□ -0.94
AP3B1-204ENST00000519295 ADAMTS12P58397 1594 aa9.2□□□□□ -0.94
AP3B1-204ENST00000519295 ABCA10Q8WWZ4 1543 aa9.2□□□□□ -0.94
AP3B1-204ENST00000519295 BCL11AQ9H165 835 aa9.19□□□□□ -0.94
AP3B1-204ENST00000519295 SYNJ1O43426 1573 aa9.18□□□□□ -0.94
AP3B1-204ENST00000519295 POLA1P09884 1462 aaPredicted RBP9.17□□□□□ -0.94
AP3B1-204ENST00000519295 CUX1P39880 1505 aa9.17□□□□□ -0.94
AP3B1-204ENST00000519295 KIF13AQ9H1H9 1805 aa9.17□□□□□ -0.94
AP3B1-204ENST00000519295 ERICH3Q5RHP9 1530 aa9.17□□□□□ -0.94
AP3B1-204ENST00000519295 DCAF8L2P0C7V8 631 aa9.13□□□□□ -0.95
AP3B1-204ENST00000519295 ARAP1Q96P48 1450 aa9.12□□□□□ -0.95
AP3B1-204ENST00000519295 NUP160Q12769 1436 aa9.12□□□□□ -0.95
AP3B1-204ENST00000519295 ZNF608Q9ULD9 1512 aaPredicted RBP9.11□□□□□ -0.95
AP3B1-204ENST00000519295 RUSC2Q8N2Y8 1516 aa9.11□□□□□ -0.95
AP3B1-204ENST00000519295 SYNJ2O15056 1496 aa9.1□□□□□ -0.95
AP3B1-204ENST00000519295 CUL7Q14999 1698 aa9.1□□□□□ -0.95
AP3B1-204ENST00000519295 MAPKBP1O60336 1514 aa9.09□□□□□ -0.95
AP3B1-204ENST00000519295 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
AP3B1-204ENST00000519295 PLPPR3Q6T4P5 718 aa9.07□□□□□ -0.96
AP3B1-204ENST00000519295 CEP170Q5SW79 1584 aa9.07□□□□□ -0.96
AP3B1-204ENST00000519295 GLI2P10070 1586 aa9.06□□□□□ -0.96
AP3B1-204ENST00000519295 GRIN2BQ13224 1484 aa9.06□□□□□ -0.96
AP3B1-204ENST00000519295 PPRC1Q5VV67 1664 aaKnown RBP9.04□□□□□ -0.96
AP3B1-204ENST00000519295 FGD5Q6ZNL6 1462 aa9.02□□□□□ -0.97
AP3B1-204ENST00000519295 SNAPC4Q5SXM2 1469 aa8.97□□□□□ -0.97
AP3B1-204ENST00000519295 GRIN2AQ12879 1464 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms