RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 SHROOM2Q13796 1616 aa31.47■■■□□ 2.63
FAM49B-208ENST00000518344 PRG4Q92954 1404 aaPredicted RBP31.46■■■□□ 2.63
FAM49B-208ENST00000518344 KIAA0586Q9BVV6 1533 aa31.44■■■□□ 2.62
FAM49B-208ENST00000518344 RAPGEF2Q9Y4G8 1499 aa31.4■■■□□ 2.62
FAM49B-208ENST00000518344 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
FAM49B-208ENST00000518344 CSRNP3Q8WYN3 585 aa31.28■■■□□ 2.6
FAM49B-208ENST00000518344 PRXQ9BXM0 1461 aa31.23■■■□□ 2.59
FAM49B-208ENST00000518344 TRHP20396 242 aaPredicted RBP31.23■■■□□ 2.59
FAM49B-208ENST00000518344 FAM9AQ8IZU1 332 aaPredicted RBP31.23■■■□□ 2.59
FAM49B-208ENST00000518344 IQGAP2Q13576 1575 aa31.22■■■□□ 2.59
FAM49B-208ENST00000518344 EEA1Q15075 1411 aa31.17■■■□□ 2.58
FAM49B-208ENST00000518344 TTBK1Q5TCY1 1321 aaPredicted RBP31.16■■■□□ 2.58
FAM49B-208ENST00000518344 CARMIL2Q6F5E8 1435 aa31.15■■■□□ 2.58
FAM49B-208ENST00000518344 PTPRGP23470 1445 aa31.08■■■□□ 2.57
FAM49B-208ENST00000518344 TNIKQ9UKE5 1360 aa31.06■■■□□ 2.56
FAM49B-208ENST00000518344 UGGT2Q9NYU1 1516 aa31.04■■■□□ 2.56
FAM49B-208ENST00000518344 DISP1Q96F81 1524 aa31.03■■■□□ 2.56
FAM49B-208ENST00000518344 NPM1P06748 294 aaKnown RBP eCLIP31.02■■■□□ 2.56
FAM49B-208ENST00000518344 CTTNBP2Q8WZ74 1663 aa31■■■□□ 2.55
FAM49B-208ENST00000518344 KIAA0556O60303 1618 aa30.91■■■□□ 2.54
FAM49B-208ENST00000518344 ADCY10Q96PN6 1610 aa30.91■■■□□ 2.54
FAM49B-208ENST00000518344 EHMT2Q96KQ7 1210 aa30.89■■■□□ 2.54
FAM49B-208ENST00000518344 GOLGA3Q08378 1498 aa30.89■■■□□ 2.53
FAM49B-208ENST00000518344 RANGAP1P46060 587 aaPredicted RBP30.84■■■□□ 2.53
FAM49B-208ENST00000518344 UACAQ9BZF9 1416 aa30.83■■■□□ 2.53
FAM49B-208ENST00000518344 P3H3Q8IVL6 736 aa30.83■■■□□ 2.53
FAM49B-208ENST00000518344 KIF21BO75037 1637 aa30.82■■■□□ 2.52
FAM49B-208ENST00000518344 UBTFP17480 764 aaKnown RBP30.77■■■□□ 2.52
FAM49B-208ENST00000518344 ABCC2Q92887 1545 aa30.76■■■□□ 2.51
FAM49B-208ENST00000518344 UHRF1BP1LA0JNW5 1464 aa30.76■■■□□ 2.51
FAM49B-208ENST00000518344 MAPKBP1O60336 1514 aa30.73■■■□□ 2.51
FAM49B-208ENST00000518344 FAM69CQ0P6D2 419 aa30.72■■■□□ 2.51
FAM49B-208ENST00000518344 PLB1Q6P1J6 1458 aa30.69■■■□□ 2.5
FAM49B-208ENST00000518344 ABCC10Q5T3U5 1492 aa30.67■■■□□ 2.5
FAM49B-208ENST00000518344 SAMD9Q5K651 1589 aa30.63■■■□□ 2.49
FAM49B-208ENST00000518344 KDM5BQ9UGL1 1544 aa30.62■■■□□ 2.49
FAM49B-208ENST00000518344 ASXL2Q76L83 1435 aa30.61■■■□□ 2.49
FAM49B-208ENST00000518344 ABCA8O94911 1581 aa30.58■■■□□ 2.49
FAM49B-208ENST00000518344 KIF13AQ9H1H9 1805 aa30.58■■■□□ 2.49
FAM49B-208ENST00000518344 DIP2BQ9P265 1576 aa30.57■■■□□ 2.48
FAM49B-208ENST00000518344 FHOD3Q2V2M9 1422 aa30.56■■■□□ 2.48
FAM49B-208ENST00000518344 ARID3CA6NKF2 412 aa30.54■■■□□ 2.48
FAM49B-208ENST00000518344 ZCCHC11Q5TAX3 1644 aaKnown RBP30.54■■■□□ 2.48
FAM49B-208ENST00000518344 EFCAB5A4FU69 1503 aa30.49■■■□□ 2.47
FAM49B-208ENST00000518344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.41■■■□□ 2.46
FAM49B-208ENST00000518344 HNRNPUL2Q1KMD3 747 aaKnown RBP30.41■■■□□ 2.46
FAM49B-208ENST00000518344 KCNH8Q96L42 1107 aa30.41■■■□□ 2.46
FAM49B-208ENST00000518344 EPRSP07814 1512 aaKnown RBP30.41■■■□□ 2.46
FAM49B-208ENST00000518344 RAPGEF6Q8TEU7 1601 aa30.4■■■□□ 2.46
FAM49B-208ENST00000518344 ATP10BO94823 1461 aa30.4■■■□□ 2.46
FAM49B-208ENST00000518344 WDR7Q9Y4E6 1490 aa30.4■■■□□ 2.46
FAM49B-208ENST00000518344 GLI2P10070 1586 aa30.37■■■□□ 2.45
FAM49B-208ENST00000518344 ARHGAP35Q9NRY4 1499 aa30.37■■■□□ 2.45
FAM49B-208ENST00000518344 NUP153P49790 1475 aaKnown RBP30.32■■■□□ 2.44
FAM49B-208ENST00000518344 TSPOAP1O95153 1857 aa30.32■■■□□ 2.44
FAM49B-208ENST00000518344 ATP1B4Q9UN42 357 aaPredicted RBP30.3■■■□□ 2.44
FAM49B-208ENST00000518344 FMN1Q68DA7 1419 aa30.27■■■□□ 2.44
FAM49B-208ENST00000518344 MAP3K4Q9Y6R4 1608 aa30.21■■■□□ 2.43
FAM49B-208ENST00000518344 PLEKHD1A6NEE1 506 aa30.2■■■□□ 2.43
FAM49B-208ENST00000518344 CD109Q6YHK3 1445 aa30.19■■■□□ 2.42
FAM49B-208ENST00000518344 CLIP1P30622 1438 aa30.17■■■□□ 2.42
FAM49B-208ENST00000518344 PPRC1Q5VV67 1664 aaKnown RBP30.16■■■□□ 2.42
FAM49B-208ENST00000518344 TEX14Q8IWB6 1497 aa30.15■■■□□ 2.42
FAM49B-208ENST00000518344 KDM6BO15054 1643 aa30.14■■■□□ 2.42
FAM49B-208ENST00000518344 LOC105371045A0A1W2PR82 267 aa30.12■■■□□ 2.41
FAM49B-208ENST00000518344 CDK13Q14004 1512 aaKnown RBP30.12■■■□□ 2.41
FAM49B-208ENST00000518344 CFAP43Q8NDM7 1665 aa30.1■■■□□ 2.41
FAM49B-208ENST00000518344 HECW1Q76N89 1606 aa30.09■■■□□ 2.41
FAM49B-208ENST00000518344 MAGI3Q5TCQ9 1506 aa30.07■■■□□ 2.4
FAM49B-208ENST00000518344 CDK11AQ9UQ88 783 aaPredicted RBP30.03■■■□□ 2.4
FAM49B-208ENST00000518344 ABCA9Q8IUA7 1624 aa30.02■■■□□ 2.4
FAM49B-208ENST00000518344 CASKIN1Q8WXD9 1431 aa30.01■■■□□ 2.39
FAM49B-208ENST00000518344 COL17A1Q9UMD9 1497 aaPredicted RBP30■■■□□ 2.39
FAM49B-208ENST00000518344 CEP162Q5TB80 1403 aa29.99■■■□□ 2.39
FAM49B-208ENST00000518344 PCF11O94913 1555 aaKnown RBP29.96■■■□□ 2.39
FAM49B-208ENST00000518344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.91■■■□□ 2.38
FAM49B-208ENST00000518344 FYCO1Q9BQS8 1478 aa29.9■■■□□ 2.38
FAM49B-208ENST00000518344 CCDC18Q5T9S5 1454 aa29.88■■■□□ 2.37
FAM49B-208ENST00000518344 LRRIQ1Q96JM4 1722 aa29.87■■■□□ 2.37
FAM49B-208ENST00000518344 TROQ12816 1431 aaPredicted RBP29.87■■■□□ 2.37
FAM49B-208ENST00000518344 PHLDB1Q86UU1 1377 aa29.86■■■□□ 2.37
FAM49B-208ENST00000518344 TTC37Q6PGP7 1564 aa29.83■■■□□ 2.37
FAM49B-208ENST00000518344 NEO1Q92859 1461 aa29.83■■■□□ 2.37
FAM49B-208ENST00000518344 ARAP3Q8WWN8 1544 aa29.81■■■□□ 2.36
FAM49B-208ENST00000518344 RAPGEF3O95398 923 aa29.78■■■□□ 2.36
FAM49B-208ENST00000518344 FANCAO15360 1455 aa29.78■■■□□ 2.36
FAM49B-208ENST00000518344 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
FAM49B-208ENST00000518344 KIF14Q15058 1648 aa29.77■■■□□ 2.36
FAM49B-208ENST00000518344 PLCH2O75038 1416 aa29.76■■■□□ 2.35
FAM49B-208ENST00000518344 AKNAQ7Z591 1439 aa29.75■■■□□ 2.35
FAM49B-208ENST00000518344 EFCAB2Q5VUJ9 269 aa29.72■■■□□ 2.35
FAM49B-208ENST00000518344 CFAP74Q9C0B2 1584 aa29.69■■■□□ 2.34
FAM49B-208ENST00000518344 DENND4BO75064 1496 aaPredicted RBP29.66■■■□□ 2.34
FAM49B-208ENST00000518344 MTUS2Q5JR59 1369 aa29.64■■■□□ 2.34
FAM49B-208ENST00000518344 MYO5CQ9NQX4 1742 aa29.64■■■□□ 2.34
FAM49B-208ENST00000518344 KDM4FA0A1W2PPD8 638 aa29.63■■■□□ 2.33
FAM49B-208ENST00000518344 VPS8Q8N3P4 1428 aa29.62■■■□□ 2.33
FAM49B-208ENST00000518344 ADGRL1O94910 1474 aa29.62■■■□□ 2.33
FAM49B-208ENST00000518344 ARHGAP5Q13017 1502 aa29.62■■■□□ 2.33
FAM49B-208ENST00000518344 SCAPERQ9BY12 1400 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms