RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
MRPS28-202ENST00000518271 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
MRPS28-202ENST00000518271 JPH4Q96JJ6 628 aa21.04■□□□□ 0.96
MRPS28-202ENST00000518271 IQGAP2Q13576 1575 aa20.98■□□□□ 0.95
MRPS28-202ENST00000518271 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
MRPS28-202ENST00000518271 ADCY10Q96PN6 1610 aa20.93■□□□□ 0.94
MRPS28-202ENST00000518271 CTTNBP2Q8WZ74 1663 aa20.93■□□□□ 0.94
MRPS28-202ENST00000518271 PRXQ9BXM0 1461 aa20.89■□□□□ 0.94
MRPS28-202ENST00000518271 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
MRPS28-202ENST00000518271 KIF13AQ9H1H9 1805 aa20.88■□□□□ 0.93
MRPS28-202ENST00000518271 DISP1Q96F81 1524 aa20.87■□□□□ 0.93
MRPS28-202ENST00000518271 UGGT2Q9NYU1 1516 aa20.87■□□□□ 0.93
MRPS28-202ENST00000518271 KIAA0556O60303 1618 aa20.82■□□□□ 0.92
MRPS28-202ENST00000518271 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
MRPS28-202ENST00000518271 MAPKBP1O60336 1514 aa20.79■□□□□ 0.92
MRPS28-202ENST00000518271 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.92
MRPS28-202ENST00000518271 PTPRGP23470 1445 aa20.77■□□□□ 0.91
MRPS28-202ENST00000518271 DIP2BQ9P265 1576 aa20.73■□□□□ 0.91
MRPS28-202ENST00000518271 EEA1Q15075 1411 aa20.71■□□□□ 0.91
MRPS28-202ENST00000518271 UHRF1BP1LA0JNW5 1464 aa20.7■□□□□ 0.9
MRPS28-202ENST00000518271 ABCC10Q5T3U5 1492 aa20.69■□□□□ 0.9
MRPS28-202ENST00000518271 ABCC2Q92887 1545 aa20.69■□□□□ 0.9
MRPS28-202ENST00000518271 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
MRPS28-202ENST00000518271 UACAQ9BZF9 1416 aa20.65■□□□□ 0.9
MRPS28-202ENST00000518271 TTBK1Q5TCY1 1321 aaPredicted RBP20.64■□□□□ 0.89
MRPS28-202ENST00000518271 KIF21BO75037 1637 aa20.64■□□□□ 0.89
MRPS28-202ENST00000518271 GOLGA3Q08378 1498 aa20.63■□□□□ 0.89
MRPS28-202ENST00000518271 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
MRPS28-202ENST00000518271 ZCCHC11Q5TAX3 1644 aaKnown RBP20.63■□□□□ 0.89
MRPS28-202ENST00000518271 SAMD9Q5K651 1589 aa20.63■□□□□ 0.89
MRPS28-202ENST00000518271 KDM5BQ9UGL1 1544 aa20.62■□□□□ 0.89
MRPS28-202ENST00000518271 ABCA8O94911 1581 aa20.6■□□□□ 0.89
MRPS28-202ENST00000518271 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
MRPS28-202ENST00000518271 PLB1Q6P1J6 1458 aa20.58■□□□□ 0.89
MRPS28-202ENST00000518271 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
MRPS28-202ENST00000518271 ASXL2Q76L83 1435 aa20.56■□□□□ 0.88
MRPS28-202ENST00000518271 PPRC1Q5VV67 1664 aaKnown RBP20.54■□□□□ 0.88
MRPS28-202ENST00000518271 FAM69CQ0P6D2 419 aa20.54■□□□□ 0.88
MRPS28-202ENST00000518271 FAM9AQ8IZU1 332 aaPredicted RBP20.53■□□□□ 0.88
MRPS28-202ENST00000518271 GLI2P10070 1586 aa20.53■□□□□ 0.88
MRPS28-202ENST00000518271 MAP3K4Q9Y6R4 1608 aa20.48■□□□□ 0.87
MRPS28-202ENST00000518271 EPRSP07814 1512 aaKnown RBP20.47■□□□□ 0.87
MRPS28-202ENST00000518271 WDR7Q9Y4E6 1490 aa20.43■□□□□ 0.86
MRPS28-202ENST00000518271 RAPGEF6Q8TEU7 1601 aa20.43■□□□□ 0.86
MRPS28-202ENST00000518271 P3H3Q8IVL6 736 aa20.42■□□□□ 0.86
MRPS28-202ENST00000518271 EFCAB5A4FU69 1503 aa20.42■□□□□ 0.86
MRPS28-202ENST00000518271 KDM6BO15054 1643 aa20.41■□□□□ 0.86
MRPS28-202ENST00000518271 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
MRPS28-202ENST00000518271 ATP10BO94823 1461 aa20.37■□□□□ 0.85
MRPS28-202ENST00000518271 CFAP43Q8NDM7 1665 aa20.35■□□□□ 0.85
MRPS28-202ENST00000518271 NUP153P49790 1475 aaKnown RBP20.35■□□□□ 0.85
MRPS28-202ENST00000518271 RANGAP1P46060 587 aaPredicted RBP20.3■□□□□ 0.84
MRPS28-202ENST00000518271 ARHGAP35Q9NRY4 1499 aa20.29■□□□□ 0.84
MRPS28-202ENST00000518271 COL17A1Q9UMD9 1497 aaPredicted RBP20.28■□□□□ 0.84
MRPS28-202ENST00000518271 ARID3CA6NKF2 412 aa20.27■□□□□ 0.84
MRPS28-202ENST00000518271 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
MRPS28-202ENST00000518271 ABCA9Q8IUA7 1624 aa20.27■□□□□ 0.83
MRPS28-202ENST00000518271 TEX14Q8IWB6 1497 aa20.25■□□□□ 0.83
MRPS28-202ENST00000518271 MAGI3Q5TCQ9 1506 aa20.25■□□□□ 0.83
MRPS28-202ENST00000518271 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
MRPS28-202ENST00000518271 CD109Q6YHK3 1445 aa20.21■□□□□ 0.83
MRPS28-202ENST00000518271 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
MRPS28-202ENST00000518271 KCNH8Q96L42 1107 aa20.19■□□□□ 0.82
MRPS28-202ENST00000518271 CDK13Q14004 1512 aaKnown RBP20.18■□□□□ 0.82
MRPS28-202ENST00000518271 HECW1Q76N89 1606 aa20.17■□□□□ 0.82
MRPS28-202ENST00000518271 FMN1Q68DA7 1419 aa20.15■□□□□ 0.82
MRPS28-202ENST00000518271 TTC37Q6PGP7 1564 aa20.12■□□□□ 0.81
MRPS28-202ENST00000518271 PCF11O94913 1555 aaKnown RBP20.11■□□□□ 0.81
MRPS28-202ENST00000518271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.1■□□□□ 0.81
MRPS28-202ENST00000518271 ARAP3Q8WWN8 1544 aa20.09■□□□□ 0.81
MRPS28-202ENST00000518271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
MRPS28-202ENST00000518271 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
MRPS28-202ENST00000518271 FRMPD1Q5SYB0 1578 aa20.06■□□□□ 0.8
MRPS28-202ENST00000518271 NEO1Q92859 1461 aa20.05■□□□□ 0.8
MRPS28-202ENST00000518271 KIF14Q15058 1648 aa20.04■□□□□ 0.8
MRPS28-202ENST00000518271 CLIP1P30622 1438 aa20.02■□□□□ 0.79
MRPS28-202ENST00000518271 CASKIN1Q8WXD9 1431 aa20.02■□□□□ 0.79
MRPS28-202ENST00000518271 PLEKHD1A6NEE1 506 aa20.01■□□□□ 0.79
MRPS28-202ENST00000518271 RICTORQ6R327 1708 aa20■□□□□ 0.79
MRPS28-202ENST00000518271 KDM4FA0A1W2PPD8 638 aa20■□□□□ 0.79
MRPS28-202ENST00000518271 CFAP74Q9C0B2 1584 aa20■□□□□ 0.79
MRPS28-202ENST00000518271 MYO5CQ9NQX4 1742 aa19.99■□□□□ 0.79
MRPS28-202ENST00000518271 PHLDB1Q86UU1 1377 aa19.98■□□□□ 0.79
MRPS28-202ENST00000518271 FYCO1Q9BQS8 1478 aa19.98■□□□□ 0.79
MRPS28-202ENST00000518271 ADGRL1O94910 1474 aa19.97■□□□□ 0.79
MRPS28-202ENST00000518271 TROQ12816 1431 aaPredicted RBP19.96■□□□□ 0.79
MRPS28-202ENST00000518271 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
MRPS28-202ENST00000518271 FANCAO15360 1455 aa19.95■□□□□ 0.78
MRPS28-202ENST00000518271 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
MRPS28-202ENST00000518271 ATP1B4Q9UN42 357 aaPredicted RBP19.92■□□□□ 0.78
MRPS28-202ENST00000518271 AKNAQ7Z591 1439 aa19.92■□□□□ 0.78
MRPS28-202ENST00000518271 PLCH2O75038 1416 aa19.91■□□□□ 0.78
MRPS28-202ENST00000518271 CDC42BPBQ9Y5S2 1711 aa19.9■□□□□ 0.78
MRPS28-202ENST00000518271 RAPGEF3O95398 923 aa19.89■□□□□ 0.77
MRPS28-202ENST00000518271 CEP162Q5TB80 1403 aa19.89■□□□□ 0.77
MRPS28-202ENST00000518271 ZMYM4Q5VZL5 1548 aa19.89■□□□□ 0.77
MRPS28-202ENST00000518271 ARHGEF40Q8TER5 1519 aa19.89■□□□□ 0.77
MRPS28-202ENST00000518271 PREX2Q70Z35 1606 aa19.88■□□□□ 0.77
MRPS28-202ENST00000518271 CDC42BPAQ5VT25 1732 aa19.88■□□□□ 0.77
MRPS28-202ENST00000518271 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms