RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 FBLN2P98095 1184 aa17.11■□□□□ 0.33
PABPC1-203ENST00000517921 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
PABPC1-203ENST00000517921 CEP162Q5TB80 1403 aa17.08■□□□□ 0.32
PABPC1-203ENST00000517921 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
PABPC1-203ENST00000517921 IQGAP2Q13576 1575 aa17.02■□□□□ 0.31
PABPC1-203ENST00000517921 NUP160Q12769 1436 aa17■□□□□ 0.31
PABPC1-203ENST00000517921 CLIP1P30622 1438 aa16.99■□□□□ 0.31
PABPC1-203ENST00000517921 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
PABPC1-203ENST00000517921 SAMD9Q5K651 1589 aa16.96■□□□□ 0.31
PABPC1-203ENST00000517921 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.3
PABPC1-203ENST00000517921 EFCAB5A4FU69 1503 aa16.95■□□□□ 0.3
PABPC1-203ENST00000517921 ARHGAP35Q9NRY4 1499 aa16.94■□□□□ 0.3
PABPC1-203ENST00000517921 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
PABPC1-203ENST00000517921 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
PABPC1-203ENST00000517921 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
PABPC1-203ENST00000517921 UGGT2Q9NYU1 1516 aa16.92■□□□□ 0.3
PABPC1-203ENST00000517921 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
PABPC1-203ENST00000517921 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
PABPC1-203ENST00000517921 CLASP1Q7Z460 1538 aa16.89■□□□□ 0.29
PABPC1-203ENST00000517921 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
PABPC1-203ENST00000517921 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
PABPC1-203ENST00000517921 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
PABPC1-203ENST00000517921 KIAA0556O60303 1618 aa16.86■□□□□ 0.29
PABPC1-203ENST00000517921 VPS8Q8N3P4 1428 aa16.83■□□□□ 0.28
PABPC1-203ENST00000517921 DISP1Q96F81 1524 aa16.83■□□□□ 0.28
PABPC1-203ENST00000517921 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
PABPC1-203ENST00000517921 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
PABPC1-203ENST00000517921 LRRIQ1Q96JM4 1722 aa16.75■□□□□ 0.27
PABPC1-203ENST00000517921 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
PABPC1-203ENST00000517921 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
PABPC1-203ENST00000517921 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
PABPC1-203ENST00000517921 FMN1Q68DA7 1419 aa16.71■□□□□ 0.27
PABPC1-203ENST00000517921 CARMIL2Q6F5E8 1435 aa16.71■□□□□ 0.27
PABPC1-203ENST00000517921 CFAP43Q8NDM7 1665 aa16.71■□□□□ 0.27
PABPC1-203ENST00000517921 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
PABPC1-203ENST00000517921 FYCO1Q9BQS8 1478 aa16.7■□□□□ 0.26
PABPC1-203ENST00000517921 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
PABPC1-203ENST00000517921 RAPGEF6Q8TEU7 1601 aa16.67■□□□□ 0.26
PABPC1-203ENST00000517921 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
PABPC1-203ENST00000517921 HECW1Q76N89 1606 aa16.67■□□□□ 0.26
PABPC1-203ENST00000517921 TIAM1Q13009 1591 aa16.64■□□□□ 0.25
PABPC1-203ENST00000517921 ABCA8O94911 1581 aa16.63■□□□□ 0.25
PABPC1-203ENST00000517921 MAP3K1Q13233 1512 aa16.62■□□□□ 0.25
PABPC1-203ENST00000517921 PLB1Q6P1J6 1458 aa16.58■□□□□ 0.24
PABPC1-203ENST00000517921 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
PABPC1-203ENST00000517921 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
PABPC1-203ENST00000517921 PTPRGP23470 1445 aa16.55■□□□□ 0.24
PABPC1-203ENST00000517921 EPRSP07814 1512 aaKnown RBP16.55■□□□□ 0.24
PABPC1-203ENST00000517921 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-203ENST00000517921 CDK13Q14004 1512 aaKnown RBP16.53■□□□□ 0.24
PABPC1-203ENST00000517921 ABCC2Q92887 1545 aa16.52■□□□□ 0.24
PABPC1-203ENST00000517921 APLP2Q06481 763 aa16.52■□□□□ 0.24
PABPC1-203ENST00000517921 LRRC9Q6ZRR7 1453 aa16.5■□□□□ 0.23
PABPC1-203ENST00000517921 PPARGC1BQ86YN6 1023 aaKnown RBP16.49■□□□□ 0.23
PABPC1-203ENST00000517921 UACAQ9BZF9 1416 aa16.49■□□□□ 0.23
PABPC1-203ENST00000517921 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
PABPC1-203ENST00000517921 MAGI3Q5TCQ9 1506 aa16.49■□□□□ 0.23
PABPC1-203ENST00000517921 ADCY10Q96PN6 1610 aa16.48■□□□□ 0.23
PABPC1-203ENST00000517921 EHBP1L1Q8N3D4 1523 aa16.48■□□□□ 0.23
PABPC1-203ENST00000517921 UHRF1BP1LA0JNW5 1464 aa16.47■□□□□ 0.23
PABPC1-203ENST00000517921 ZCCHC11Q5TAX3 1644 aaKnown RBP16.46■□□□□ 0.23
PABPC1-203ENST00000517921 SUPT6HQ7KZ85 1726 aaKnown RBP16.46■□□□□ 0.23
PABPC1-203ENST00000517921 KANK4Q5T7N3 995 aaPredicted RBP16.46■□□□□ 0.23
PABPC1-203ENST00000517921 ATP10BO94823 1461 aa16.43■□□□□ 0.22
PABPC1-203ENST00000517921 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
PABPC1-203ENST00000517921 KDM5BQ9UGL1 1544 aa16.4■□□□□ 0.22
PABPC1-203ENST00000517921 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
PABPC1-203ENST00000517921 MTUS2Q5JR59 1369 aa16.39■□□□□ 0.21
PABPC1-203ENST00000517921 KIF14Q15058 1648 aa16.37■□□□□ 0.21
PABPC1-203ENST00000517921 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
PABPC1-203ENST00000517921 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
PABPC1-203ENST00000517921 CDC42BPAQ5VT25 1732 aa16.32■□□□□ 0.2
PABPC1-203ENST00000517921 ITSN2Q9NZM3 1697 aa16.32■□□□□ 0.2
PABPC1-203ENST00000517921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
PABPC1-203ENST00000517921 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
PABPC1-203ENST00000517921 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
PABPC1-203ENST00000517921 PHLDB1Q86UU1 1377 aa16.3■□□□□ 0.2
PABPC1-203ENST00000517921 CDK11AQ9UQ88 783 aaPredicted RBP16.3■□□□□ 0.2
PABPC1-203ENST00000517921 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
PABPC1-203ENST00000517921 ABCC10Q5T3U5 1492 aa16.27■□□□□ 0.19
PABPC1-203ENST00000517921 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
PABPC1-203ENST00000517921 MYO5CQ9NQX4 1742 aa16.26■□□□□ 0.19
PABPC1-203ENST00000517921 FAM69CQ0P6D2 419 aa16.26■□□□□ 0.19
PABPC1-203ENST00000517921 MYOM3Q5VTT5 1437 aa16.26■□□□□ 0.19
PABPC1-203ENST00000517921 PTPN23Q9H3S7 1636 aa16.25■□□□□ 0.19
PABPC1-203ENST00000517921 CDC42BPBQ9Y5S2 1711 aa16.25■□□□□ 0.19
PABPC1-203ENST00000517921 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
PABPC1-203ENST00000517921 PREX2Q70Z35 1606 aa16.24■□□□□ 0.19
PABPC1-203ENST00000517921 PLEKHD1A6NEE1 506 aa16.24■□□□□ 0.19
PABPC1-203ENST00000517921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.197e-8■□□□□ 10.3
PABPC1-203ENST00000517921 FGD6Q6ZV73 1430 aa16.23■□□□□ 0.19
PABPC1-203ENST00000517921 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
PABPC1-203ENST00000517921 MAPKBP1O60336 1514 aa16.22■□□□□ 0.19
PABPC1-203ENST00000517921 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
PABPC1-203ENST00000517921 ASXL2Q76L83 1435 aa16.21■□□□□ 0.19
PABPC1-203ENST00000517921 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
PABPC1-203ENST00000517921 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
PABPC1-203ENST00000517921 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
PABPC1-203ENST00000517921 TCOF1Q13428 1488 aaKnown RBP16.18■□□□□ 0.18
PABPC1-203ENST00000517921 KIF13AQ9H1H9 1805 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms