RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 ARHGEF11O15085 1522 aa26.09■■□□□ 1.77
C8orf88-201ENST00000517562 PRXQ9BXM0 1461 aa26.04■■□□□ 1.76
C8orf88-201ENST00000517562 JPH4Q96JJ6 628 aa26.04■■□□□ 1.76
C8orf88-201ENST00000517562 EEA1Q15075 1411 aa26.03■■□□□ 1.76
C8orf88-201ENST00000517562 ERCC6L2Q5T890 1561 aa26.02■■□□□ 1.76
C8orf88-201ENST00000517562 CYB5RLQ6IPT4 315 aa26■■□□□ 1.75
C8orf88-201ENST00000517562 KIAA0586Q9BVV6 1533 aa25.98■■□□□ 1.75
C8orf88-201ENST00000517562 SHROOM2Q13796 1616 aa25.95■■□□□ 1.74
C8orf88-201ENST00000517562 PRG4Q92954 1404 aaPredicted RBP25.94■■□□□ 1.74
C8orf88-201ENST00000517562 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
C8orf88-201ENST00000517562 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
C8orf88-201ENST00000517562 IQGAP2Q13576 1575 aa25.87■■□□□ 1.73
C8orf88-201ENST00000517562 CTTNBP2Q8WZ74 1663 aa25.87■■□□□ 1.73
C8orf88-201ENST00000517562 RANGAP1P46060 587 aaPredicted RBP25.86■■□□□ 1.73
C8orf88-201ENST00000517562 KIF21BO75037 1637 aa25.82■■□□□ 1.72
C8orf88-201ENST00000517562 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
C8orf88-201ENST00000517562 P3H3Q8IVL6 736 aa25.74■■□□□ 1.71
C8orf88-201ENST00000517562 DISP1Q96F81 1524 aa25.72■■□□□ 1.71
C8orf88-201ENST00000517562 UGGT2Q9NYU1 1516 aa25.72■■□□□ 1.71
C8orf88-201ENST00000517562 GOLGA3Q08378 1498 aa25.7■■□□□ 1.7
C8orf88-201ENST00000517562 CARMIL2Q6F5E8 1435 aa25.7■■□□□ 1.7
C8orf88-201ENST00000517562 PTPRGP23470 1445 aa25.64■■□□□ 1.7
C8orf88-201ENST00000517562 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.7
C8orf88-201ENST00000517562 TNIKQ9UKE5 1360 aa25.63■■□□□ 1.69
C8orf88-201ENST00000517562 KIAA0556O60303 1618 aa25.63■■□□□ 1.69
C8orf88-201ENST00000517562 ADCY10Q96PN6 1610 aa25.51■■□□□ 1.67
C8orf88-201ENST00000517562 SAMD9Q5K651 1589 aa25.5■■□□□ 1.67
C8orf88-201ENST00000517562 FHOD3Q2V2M9 1422 aa25.47■■□□□ 1.67
C8orf88-201ENST00000517562 PLB1Q6P1J6 1458 aa25.45■■□□□ 1.66
C8orf88-201ENST00000517562 UACAQ9BZF9 1416 aa25.44■■□□□ 1.66
C8orf88-201ENST00000517562 ARID3CA6NKF2 412 aa25.43■■□□□ 1.66
C8orf88-201ENST00000517562 NPM1P06748 294 aaKnown RBP eCLIP25.43■■□□□ 1.66
C8orf88-201ENST00000517562 TRHP20396 242 aaPredicted RBP25.43■■□□□ 1.66
C8orf88-201ENST00000517562 ARHGAP35Q9NRY4 1499 aa25.4■■□□□ 1.66
C8orf88-201ENST00000517562 EFCAB5A4FU69 1503 aa25.36■■□□□ 1.65
C8orf88-201ENST00000517562 ABCC2Q92887 1545 aa25.35■■□□□ 1.65
C8orf88-201ENST00000517562 ABCA8O94911 1581 aa25.35■■□□□ 1.65
C8orf88-201ENST00000517562 UHRF1BP1LA0JNW5 1464 aa25.33■■□□□ 1.65
C8orf88-201ENST00000517562 CLIP1P30622 1438 aa25.3■■□□□ 1.64
C8orf88-201ENST00000517562 ATP1B4Q9UN42 357 aaPredicted RBP25.3■■□□□ 1.64
C8orf88-201ENST00000517562 ZCCHC11Q5TAX3 1644 aaKnown RBP25.26■■□□□ 1.63
C8orf88-201ENST00000517562 RAPGEF6Q8TEU7 1601 aa25.26■■□□□ 1.63
C8orf88-201ENST00000517562 KDM5BQ9UGL1 1544 aa25.24■■□□□ 1.63
C8orf88-201ENST00000517562 CEP162Q5TB80 1403 aa25.24■■□□□ 1.63
C8orf88-201ENST00000517562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.23■■□□□ 1.63
C8orf88-201ENST00000517562 HNRNPUL2Q1KMD3 747 aaKnown RBP25.23■■□□□ 1.63
C8orf88-201ENST00000517562 ATP10BO94823 1461 aa25.21■■□□□ 1.63
C8orf88-201ENST00000517562 ASXL2Q76L83 1435 aa25.2■■□□□ 1.63
C8orf88-201ENST00000517562 FAM69CQ0P6D2 419 aa25.2■■□□□ 1.62
C8orf88-201ENST00000517562 KIF13AQ9H1H9 1805 aa25.19■■□□□ 1.62
C8orf88-201ENST00000517562 MAPKBP1O60336 1514 aa25.18■■□□□ 1.62
C8orf88-201ENST00000517562 NUP153P49790 1475 aaKnown RBP25.17■■□□□ 1.62
C8orf88-201ENST00000517562 KCNH8Q96L42 1107 aa25.17■■□□□ 1.62
C8orf88-201ENST00000517562 FMN1Q68DA7 1419 aa25.16■■□□□ 1.62
C8orf88-201ENST00000517562 AEBP2Q6ZN18 517 aaPredicted RBP25.14■■□□□ 1.62
C8orf88-201ENST00000517562 ABCC10Q5T3U5 1492 aa25.11■■□□□ 1.61
C8orf88-201ENST00000517562 TSPOAP1O95153 1857 aa25.1■■□□□ 1.61
C8orf88-201ENST00000517562 CDK13Q14004 1512 aaKnown RBP25.09■■□□□ 1.61
C8orf88-201ENST00000517562 DIP2BQ9P265 1576 aa25.09■■□□□ 1.61
C8orf88-201ENST00000517562 LRRIQ1Q96JM4 1722 aa25.09■■□□□ 1.61
C8orf88-201ENST00000517562 PCF11O94913 1555 aaKnown RBP25.07■■□□□ 1.6
C8orf88-201ENST00000517562 WDR7Q9Y4E6 1490 aa25.04■■□□□ 1.6
C8orf88-201ENST00000517562 HECW1Q76N89 1606 aa25.04■■□□□ 1.6
C8orf88-201ENST00000517562 EPRSP07814 1512 aaKnown RBP25.02■■□□□ 1.6
C8orf88-201ENST00000517562 PLEKHD1A6NEE1 506 aa25.02■■□□□ 1.6
C8orf88-201ENST00000517562 CASKIN1Q8WXD9 1431 aa25.02■■□□□ 1.6
C8orf88-201ENST00000517562 GLI2P10070 1586 aa24.93■■□□□ 1.58
C8orf88-201ENST00000517562 FYCO1Q9BQS8 1478 aa24.93■■□□□ 1.58
C8orf88-201ENST00000517562 CDK11AQ9UQ88 783 aaPredicted RBP24.88■■□□□ 1.57
C8orf88-201ENST00000517562 PPRC1Q5VV67 1664 aaKnown RBP24.88■■□□□ 1.57
C8orf88-201ENST00000517562 VPS8Q8N3P4 1428 aa24.87■■□□□ 1.57
C8orf88-201ENST00000517562 MAP3K4Q9Y6R4 1608 aa24.87■■□□□ 1.57
C8orf88-201ENST00000517562 CD109Q6YHK3 1445 aa24.86■■□□□ 1.57
C8orf88-201ENST00000517562 MAGI3Q5TCQ9 1506 aa24.85■■□□□ 1.57
C8orf88-201ENST00000517562 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.57
C8orf88-201ENST00000517562 CFAP43Q8NDM7 1665 aa24.81■■□□□ 1.56
C8orf88-201ENST00000517562 KIF14Q15058 1648 aa24.81■■□□□ 1.56
C8orf88-201ENST00000517562 TROQ12816 1431 aaPredicted RBP24.8■■□□□ 1.56
C8orf88-201ENST00000517562 ABCA9Q8IUA7 1624 aa24.8■■□□□ 1.56
C8orf88-201ENST00000517562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.8■■□□□ 1.56
C8orf88-201ENST00000517562 TTC37Q6PGP7 1564 aa24.77■■□□□ 1.56
C8orf88-201ENST00000517562 MTUS2Q5JR59 1369 aa24.72■■□□□ 1.55
C8orf88-201ENST00000517562 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
C8orf88-201ENST00000517562 TIAM1Q13009 1591 aa24.68■■□□□ 1.54
C8orf88-201ENST00000517562 TEX14Q8IWB6 1497 aa24.68■■□□□ 1.54
C8orf88-201ENST00000517562 COL17A1Q9UMD9 1497 aaPredicted RBP24.68■■□□□ 1.54
C8orf88-201ENST00000517562 APLP2Q06481 763 aa24.67■■□□□ 1.54
C8orf88-201ENST00000517562 KDM6BO15054 1643 aa24.66■■□□□ 1.54
C8orf88-201ENST00000517562 MYO5CQ9NQX4 1742 aa24.65■■□□□ 1.54
C8orf88-201ENST00000517562 PLCH2O75038 1416 aa24.62■■□□□ 1.53
C8orf88-201ENST00000517562 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
C8orf88-201ENST00000517562 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
C8orf88-201ENST00000517562 CDC42BPAQ5VT25 1732 aa24.6■■□□□ 1.53
C8orf88-201ENST00000517562 FANCAO15360 1455 aa24.59■■□□□ 1.53
C8orf88-201ENST00000517562 LRRC9Q6ZRR7 1453 aa24.59■■□□□ 1.53
C8orf88-201ENST00000517562 RAPGEF3O95398 923 aa24.59■■□□□ 1.53
C8orf88-201ENST00000517562 EHBP1L1Q8N3D4 1523 aa24.59■■□□□ 1.53
C8orf88-201ENST00000517562 EFCAB2Q5VUJ9 269 aa24.58■■□□□ 1.53
C8orf88-201ENST00000517562 ZNF777Q9ULD5 760 aaPredicted RBP24.58■■□□□ 1.53
C8orf88-201ENST00000517562 AKNAQ7Z591 1439 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms