RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 SOGA1O94964 1423 aa2.88□□□□□ -1.95
RNU1-40P-201ENST00000516816 VPS8Q8N3P4 1428 aa2.88□□□□□ -1.95
RNU1-40P-201ENST00000516816 ITGAEP38570 1179 aa2.88□□□□□ -1.95
RNU1-40P-201ENST00000516816 FKBP8Q14318 412 aa2.88□□□□□ -1.95
RNU1-40P-201ENST00000516816 PABPN1Q86U42 306 aaKnown RBP eCLIP2.88□□□□□ -1.95
RNU1-40P-201ENST00000516816 POTEDQ86YR6 584 aa2.88□□□□□ -1.95
RNU1-40P-201ENST00000516816 CDK11AQ9UQ88 783 aaPredicted RBP2.88□□□□□ -1.95
RNU1-40P-201ENST00000516816 KIF27Q86VH2 1401 aa2.87□□□□□ -1.95
RNU1-40P-201ENST00000516816 CCER2I3L3R5 266 aa2.87□□□□□ -1.95
RNU1-40P-201ENST00000516816 ZBTB22O15209 634 aa2.87□□□□□ -1.95
RNU1-40P-201ENST00000516816 PLEKHG5O94827 1062 aa2.87□□□□□ -1.95
RNU1-40P-201ENST00000516816 FBLN2P98095 1184 aa2.87□□□□□ -1.95
RNU1-40P-201ENST00000516816 FAM50AQ14320 339 aaKnown RBP2.87□□□□□ -1.95
RNU1-40P-201ENST00000516816 ERICH6BQ5W0A0 696 aa2.87□□□□□ -1.95
RNU1-40P-201ENST00000516816 FHAD1B1AJZ9 1412 aa2.85□□□□□ -1.95
RNU1-40P-201ENST00000516816 PEG3Q9GZU2 1588 aa2.85□□□□□ -1.95
RNU1-40P-201ENST00000516816 SETD5Q9C0A6 1442 aa2.85□□□□□ -1.95
RNU1-40P-201ENST00000516816 ERICH3Q5RHP9 1530 aa2.84□□□□□ -1.95
RNU1-40P-201ENST00000516816 DDX10Q13206 875 aaKnown RBP2.84□□□□□ -1.95
RNU1-40P-201ENST00000516816 ZBTB47Q9UFB7 747 aaPredicted RBP2.84□□□□□ -1.95
RNU1-40P-201ENST00000516816 TAOK2Q9UL54 1235 aa2.84□□□□□ -1.95
RNU1-40P-201ENST00000516816 CCNB3Q8WWL7 1395 aa2.84□□□□□ -1.96
RNU1-40P-201ENST00000516816 TONSLQ96HA7 1378 aa2.84□□□□□ -1.96
RNU1-40P-201ENST00000516816 ATAD2BQ9ULI0 1458 aa2.84□□□□□ -1.96
RNU1-40P-201ENST00000516816 RUSC2Q8N2Y8 1516 aa2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 TOP2BQ02880 1626 aa2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 PPP1R15AO75807 674 aaPredicted RBP2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 PRKCSHP14314 528 aaPredicted RBP2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 HOMEZQ8IX15 550 aa2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 TRIM52Q96A61 297 aa2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 ANP32EQ9BTT0 268 aa2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 ZNF219Q9P2Y4 722 aaPredicted RBP2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 SUPT16HQ9Y5B9 1047 aaKnown RBP2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 MAP3K1Q13233 1512 aa2.83□□□□□ -1.96
RNU1-40P-201ENST00000516816 DCAF8L1A6NGE4 600 aa2.82□□□□□ -1.96
RNU1-40P-201ENST00000516816 EIF4G2P78344 907 aaKnown RBP eCLIP2.82□□□□□ -1.96
RNU1-40P-201ENST00000516816 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.82□□□□□ -1.96
RNU1-40P-201ENST00000516816 STAG3Q9UJ98 1225 aa2.82□□□□□ -1.96
RNU1-40P-201ENST00000516816 DHX57Q6P158 1386 aaKnown RBP2.82□□□□□ -1.96
RNU1-40P-201ENST00000516816 BIVM-ERCC5R4GMW8 1640 aa2.82□□□□□ -1.96
RNU1-40P-201ENST00000516816 PRDM2Q13029 1718 aa2.82□□□□□ -1.96
RNU1-40P-201ENST00000516816 SLC4A2P04920 1241 aa2.81□□□□□ -1.96
RNU1-40P-201ENST00000516816 KANK4Q5T7N3 995 aaPredicted RBP2.81□□□□□ -1.96
RNU1-40P-201ENST00000516816 PPP4R2Q9NY27 417 aa2.81□□□□□ -1.96
RNU1-40P-201ENST00000516816 CARMIL1Q5VZK9 1371 aa2.81□□□□□ -1.96
RNU1-40P-201ENST00000516816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.81□□□□□ -1.96
RNU1-40P-201ENST00000516816 RRBP1Q9P2E9 1410 aaKnown RBP2.81□□□□□ -1.96
RNU1-40P-201ENST00000516816 NCAPD3P42695 1498 aa2.81□□□□□ -1.96
RNU1-40P-201ENST00000516816 RAPGEF2Q9Y4G8 1499 aa2.81□□□□□ -1.96
RNU1-40P-201ENST00000516816 EIF4G1Q04637 1599 aaKnown RBP2.81□□□□□ -1.96
RNU1-40P-201ENST00000516816 SYNJ1O43426 1573 aa2.8□□□□□ -1.96
RNU1-40P-201ENST00000516816 FMN1Q68DA7 1419 aa2.8□□□□□ -1.96
RNU1-40P-201ENST00000516816 BICRAQ9NZM4 1560 aa2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 HMGXB3Q12766 1538 aa2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 PRXQ9BXM0 1461 aa2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 ARHGAP35Q9NRY4 1499 aa2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 MTUS2Q5JR59 1369 aa2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 RAB3GAP2Q9H2M9 1393 aa2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 HNRNPUQ00839 825 aaKnown RBP eCLIP2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 RTL5Q5HYW3 569 aaPredicted RBP2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 P3H3Q8IVL6 736 aa2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 BCANQ96GW7 911 aa2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 SIN3AQ96ST3 1273 aa2.79□□□□□ -1.96
RNU1-40P-201ENST00000516816 IGF1RP08069 1367 aa2.78□□□□□ -1.96
RNU1-40P-201ENST00000516816 CADPSQ9ULU8 1353 aa2.78□□□□□ -1.96
RNU1-40P-201ENST00000516816 SPDYE4A6NLX3 237 aa2.78□□□□□ -1.96
RNU1-40P-201ENST00000516816 EIF5BO60841 1220 aaKnown RBP2.78□□□□□ -1.96
RNU1-40P-201ENST00000516816 ANP32AP39687 249 aaKnown RBP2.78□□□□□ -1.96
RNU1-40P-201ENST00000516816 TSHZ2Q9NRE2 1034 aa2.78□□□□□ -1.96
RNU1-40P-201ENST00000516816 RYDENQ9NUL5 291 aaKnown RBP2.78□□□□□ -1.96
RNU1-40P-201ENST00000516816 RBM19Q9Y4C8 960 aaKnown RBP2.78□□□□□ -1.96
RNU1-40P-201ENST00000516816 CUX2O14529 1486 aa2.77□□□□□ -1.97
RNU1-40P-201ENST00000516816 CFTRP13569 1480 aa2.77□□□□□ -1.97
RNU1-40P-201ENST00000516816 ARID4BQ4LE39 1312 aaPredicted RBP2.77□□□□□ -1.97
RNU1-40P-201ENST00000516816 FANCIQ9NVI1 1328 aa2.77□□□□□ -1.97
RNU1-40P-201ENST00000516816 FAM9BQ8IZU0 186 aa2.77□□□□□ -1.97
RNU1-40P-201ENST00000516816 VSIG10Q8N0Z9 540 aa2.77□□□□□ -1.97
RNU1-40P-201ENST00000516816 TMC1Q8TDI8 760 aa2.77□□□□□ -1.97
RNU1-40P-201ENST00000516816 CUX1P39880 1505 aa2.77□□□□□ -1.97
RNU1-40P-201ENST00000516816 LRRC9Q6ZRR7 1453 aa2.77□□□□□ -1.97
RNU1-40P-201ENST00000516816 TIAM1Q13009 1591 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 TSPY4P0CV99 314 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 TSPY10P0CW01 314 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 RSPH4AQ5TD94 716 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 CCDC136Q96JN2 1154 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 MPHOSPH9Q99550 1183 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 MRS2Q9HD23 443 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 EFCAB5A4FU69 1503 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 AQRO60306 1485 aaKnown RBP eCLIP2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 SUPT6HQ7KZ85 1726 aaKnown RBP2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 CASKIN1Q8WXD9 1431 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 UACAQ9BZF9 1416 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 CUL7Q14999 1698 aa2.76□□□□□ -1.97
RNU1-40P-201ENST00000516816 PPM1GO15355 546 aaPredicted RBP2.75□□□□□ -1.97
RNU1-40P-201ENST00000516816 PLCB2Q00722 1185 aa2.75□□□□□ -1.97
RNU1-40P-201ENST00000516816 PDE3BQ13370 1112 aa2.75□□□□□ -1.97
RNU1-40P-201ENST00000516816 RALBP1Q15311 655 aa2.75□□□□□ -1.97
RNU1-40P-201ENST00000516816 DDRGK1Q96HY6 314 aa2.75□□□□□ -1.97
RNU1-40P-201ENST00000516816 POLR3GLQ9BT43 218 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms