RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 FBLN2P98095 1184 aa19.62■□□□□ 0.73
PDLIM5-220ENST00000514830 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
PDLIM5-220ENST00000514830 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
PDLIM5-220ENST00000514830 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
PDLIM5-220ENST00000514830 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
PDLIM5-220ENST00000514830 KIAA0586Q9BVV6 1533 aa19.61■□□□□ 0.73
PDLIM5-220ENST00000514830 IQGAP2Q13576 1575 aa19.57■□□□□ 0.72
PDLIM5-220ENST00000514830 SHROOM2Q13796 1616 aa19.55■□□□□ 0.72
PDLIM5-220ENST00000514830 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
PDLIM5-220ENST00000514830 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
PDLIM5-220ENST00000514830 TNIKQ9UKE5 1360 aa19.52■□□□□ 0.72
PDLIM5-220ENST00000514830 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-220ENST00000514830 UGGT2Q9NYU1 1516 aa19.49■□□□□ 0.71
PDLIM5-220ENST00000514830 UBTFP17480 764 aaKnown RBP19.47■□□□□ 0.71
PDLIM5-220ENST00000514830 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
PDLIM5-220ENST00000514830 SAMD9Q5K651 1589 aa19.42■□□□□ 0.7
PDLIM5-220ENST00000514830 EFCAB5A4FU69 1503 aa19.41■□□□□ 0.7
PDLIM5-220ENST00000514830 JPH4Q96JJ6 628 aa19.4■□□□□ 0.7
PDLIM5-220ENST00000514830 DISP1Q96F81 1524 aa19.37■□□□□ 0.69
PDLIM5-220ENST00000514830 KIAA0556O60303 1618 aa19.36■□□□□ 0.69
PDLIM5-220ENST00000514830 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
PDLIM5-220ENST00000514830 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
PDLIM5-220ENST00000514830 PRG4Q92954 1404 aaPredicted RBP19.34■□□□□ 0.69
PDLIM5-220ENST00000514830 CEP162Q5TB80 1403 aa19.33■□□□□ 0.68
PDLIM5-220ENST00000514830 ARHGAP35Q9NRY4 1499 aa19.31■□□□□ 0.68
PDLIM5-220ENST00000514830 CLIP1P30622 1438 aa19.31■□□□□ 0.68
PDLIM5-220ENST00000514830 ERCC6L2Q5T890 1561 aa19.3■□□□□ 0.68
PDLIM5-220ENST00000514830 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
PDLIM5-220ENST00000514830 FHOD3Q2V2M9 1422 aa19.19■□□□□ 0.66
PDLIM5-220ENST00000514830 FMN1Q68DA7 1419 aa19.18■□□□□ 0.66
PDLIM5-220ENST00000514830 PTPRGP23470 1445 aa19.17■□□□□ 0.66
PDLIM5-220ENST00000514830 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
PDLIM5-220ENST00000514830 ABCA8O94911 1581 aa19.14■□□□□ 0.65
PDLIM5-220ENST00000514830 UHRF1BP1LA0JNW5 1464 aa19.12■□□□□ 0.65
PDLIM5-220ENST00000514830 P3H3Q8IVL6 736 aa19.12■□□□□ 0.65
PDLIM5-220ENST00000514830 RAPGEF6Q8TEU7 1601 aa19.11■□□□□ 0.65
PDLIM5-220ENST00000514830 VPS8Q8N3P4 1428 aa19.1■□□□□ 0.65
PDLIM5-220ENST00000514830 ABCC2Q92887 1545 aa19.09■□□□□ 0.65
PDLIM5-220ENST00000514830 UACAQ9BZF9 1416 aa19.08■□□□□ 0.65
PDLIM5-220ENST00000514830 FYCO1Q9BQS8 1478 aa19.08■□□□□ 0.64
PDLIM5-220ENST00000514830 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.64
PDLIM5-220ENST00000514830 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
PDLIM5-220ENST00000514830 PLB1Q6P1J6 1458 aa19.06■□□□□ 0.64
PDLIM5-220ENST00000514830 HECW1Q76N89 1606 aa19.06■□□□□ 0.64
PDLIM5-220ENST00000514830 ADCY10Q96PN6 1610 aa19.06■□□□□ 0.64
PDLIM5-220ENST00000514830 LRRIQ1Q96JM4 1722 aa19.02■□□□□ 0.63
PDLIM5-220ENST00000514830 NUP153P49790 1475 aaKnown RBP19.02■□□□□ 0.63
PDLIM5-220ENST00000514830 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
PDLIM5-220ENST00000514830 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
PDLIM5-220ENST00000514830 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
PDLIM5-220ENST00000514830 EPRSP07814 1512 aaKnown RBP18.96■□□□□ 0.63
PDLIM5-220ENST00000514830 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
PDLIM5-220ENST00000514830 CFAP43Q8NDM7 1665 aa18.95■□□□□ 0.62
PDLIM5-220ENST00000514830 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
PDLIM5-220ENST00000514830 ATP10BO94823 1461 aa18.93■□□□□ 0.62
PDLIM5-220ENST00000514830 TIAM1Q13009 1591 aa18.9■□□□□ 0.62
PDLIM5-220ENST00000514830 MAPKBP1O60336 1514 aa18.9■□□□□ 0.62
PDLIM5-220ENST00000514830 CDK13Q14004 1512 aaKnown RBP18.89■□□□□ 0.61
PDLIM5-220ENST00000514830 NPM1P06748 294 aaKnown RBP eCLIP18.84■□□□□ 0.61
PDLIM5-220ENST00000514830 ATP1B4Q9UN42 357 aaPredicted RBP18.81■□□□□ 0.6
PDLIM5-220ENST00000514830 CDK11AQ9UQ88 783 aaPredicted RBP18.81■□□□□ 0.6
PDLIM5-220ENST00000514830 EHBP1L1Q8N3D4 1523 aa18.8■□□□□ 0.6
PDLIM5-220ENST00000514830 MAGI3Q5TCQ9 1506 aa18.79■□□□□ 0.6
PDLIM5-220ENST00000514830 WDR7Q9Y4E6 1490 aa18.79■□□□□ 0.6
PDLIM5-220ENST00000514830 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
PDLIM5-220ENST00000514830 LRRC9Q6ZRR7 1453 aa18.78■□□□□ 0.6
PDLIM5-220ENST00000514830 TROQ12816 1431 aaPredicted RBP18.78■□□□□ 0.6
PDLIM5-220ENST00000514830 APLP2Q06481 763 aa18.77■□□□□ 0.6
PDLIM5-220ENST00000514830 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
PDLIM5-220ENST00000514830 ARID3CA6NKF2 412 aa18.74■□□□□ 0.59
PDLIM5-220ENST00000514830 SUPT6HQ7KZ85 1726 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-220ENST00000514830 KIF14Q15058 1648 aa18.74■□□□□ 0.59
PDLIM5-220ENST00000514830 GLI2P10070 1586 aa18.73■□□□□ 0.59
PDLIM5-220ENST00000514830 MTUS2Q5JR59 1369 aa18.73■□□□□ 0.59
PDLIM5-220ENST00000514830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-220ENST00000514830 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
PDLIM5-220ENST00000514830 ABCA9Q8IUA7 1624 aa18.71■□□□□ 0.58
PDLIM5-220ENST00000514830 DIP2BQ9P265 1576 aa18.7■□□□□ 0.58
PDLIM5-220ENST00000514830 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
PDLIM5-220ENST00000514830 KANK4Q5T7N3 995 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-220ENST00000514830 KIF13AQ9H1H9 1805 aa18.69■□□□□ 0.58
PDLIM5-220ENST00000514830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM5-220ENST00000514830 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
PDLIM5-220ENST00000514830 MAP3K4Q9Y6R4 1608 aa18.65■□□□□ 0.58
PDLIM5-220ENST00000514830 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
PDLIM5-220ENST00000514830 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.58
PDLIM5-220ENST00000514830 ARAP3Q8WWN8 1544 aa18.64■□□□□ 0.57
PDLIM5-220ENST00000514830 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
PDLIM5-220ENST00000514830 MYO5CQ9NQX4 1742 aa18.63■□□□□ 0.57
PDLIM5-220ENST00000514830 CDC42BPAQ5VT25 1732 aa18.63■□□□□ 0.57
PDLIM5-220ENST00000514830 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
PDLIM5-220ENST00000514830 CDC42BPBQ9Y5S2 1711 aa18.58■□□□□ 0.57
PDLIM5-220ENST00000514830 KCNH8Q96L42 1107 aa18.58■□□□□ 0.56
PDLIM5-220ENST00000514830 GPATCH8Q9UKJ3 1502 aaKnown RBP18.57■□□□□ 0.56
PDLIM5-220ENST00000514830 PLCH2O75038 1416 aa18.56■□□□□ 0.56
PDLIM5-220ENST00000514830 PPRC1Q5VV67 1664 aaKnown RBP18.55■□□□□ 0.56
PDLIM5-220ENST00000514830 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
PDLIM5-220ENST00000514830 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
PDLIM5-220ENST00000514830 CD109Q6YHK3 1445 aa18.54■□□□□ 0.56
PDLIM5-220ENST00000514830 MIA2Q96PC5 1412 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms