RNA–Protein interactions for RNA: ENST00000514676.5

CDK7-211, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-211ENST00000514676 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
CDK7-211ENST00000514676 JPH4Q96JJ6 628 aa22.35■■□□□ 1.17
CDK7-211ENST00000514676 PRG4Q92954 1404 aaPredicted RBP22.32■■□□□ 1.16
CDK7-211ENST00000514676 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
CDK7-211ENST00000514676 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
CDK7-211ENST00000514676 KIAA0586Q9BVV6 1533 aa22.26■■□□□ 1.15
CDK7-211ENST00000514676 RAPGEF2Q9Y4G8 1499 aa22.16■■□□□ 1.14
CDK7-211ENST00000514676 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
CDK7-211ENST00000514676 IQGAP2Q13576 1575 aa22.1■■□□□ 1.13
CDK7-211ENST00000514676 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
CDK7-211ENST00000514676 CARMIL2Q6F5E8 1435 aa22.02■■□□□ 1.12
CDK7-211ENST00000514676 PTPRGP23470 1445 aa22.01■■□□□ 1.11
CDK7-211ENST00000514676 ADCY10Q96PN6 1610 aa22■■□□□ 1.11
CDK7-211ENST00000514676 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
CDK7-211ENST00000514676 DISP1Q96F81 1524 aa21.99■■□□□ 1.11
CDK7-211ENST00000514676 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
CDK7-211ENST00000514676 UGGT2Q9NYU1 1516 aa21.97■■□□□ 1.11
CDK7-211ENST00000514676 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
CDK7-211ENST00000514676 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
CDK7-211ENST00000514676 CTTNBP2Q8WZ74 1663 aa21.97■■□□□ 1.11
CDK7-211ENST00000514676 KIAA0556O60303 1618 aa21.91■■□□□ 1.1
CDK7-211ENST00000514676 EEA1Q15075 1411 aa21.88■■□□□ 1.09
CDK7-211ENST00000514676 KIF13AQ9H1H9 1805 aa21.87■■□□□ 1.09
CDK7-211ENST00000514676 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
CDK7-211ENST00000514676 FAM69CQ0P6D2 419 aa21.85■■□□□ 1.09
CDK7-211ENST00000514676 UACAQ9BZF9 1416 aa21.84■■□□□ 1.09
CDK7-211ENST00000514676 ABCC10Q5T3U5 1492 aa21.83■■□□□ 1.08
CDK7-211ENST00000514676 ABCC2Q92887 1545 aa21.81■■□□□ 1.08
CDK7-211ENST00000514676 UHRF1BP1LA0JNW5 1464 aa21.81■■□□□ 1.08
CDK7-211ENST00000514676 GOLGA3Q08378 1498 aa21.8■■□□□ 1.08
CDK7-211ENST00000514676 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
CDK7-211ENST00000514676 DIP2BQ9P265 1576 aa21.78■■□□□ 1.08
CDK7-211ENST00000514676 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.08
CDK7-211ENST00000514676 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
CDK7-211ENST00000514676 PLB1Q6P1J6 1458 aa21.76■■□□□ 1.07
CDK7-211ENST00000514676 ASXL2Q76L83 1435 aa21.73■■□□□ 1.07
CDK7-211ENST00000514676 KDM5BQ9UGL1 1544 aa21.71■■□□□ 1.07
CDK7-211ENST00000514676 KIF21BO75037 1637 aa21.71■■□□□ 1.07
CDK7-211ENST00000514676 ZCCHC11Q5TAX3 1644 aaKnown RBP21.7■■□□□ 1.06
CDK7-211ENST00000514676 ABCA8O94911 1581 aa21.69■■□□□ 1.06
CDK7-211ENST00000514676 TSPOAP1O95153 1857 aa21.67■■□□□ 1.06
CDK7-211ENST00000514676 SAMD9Q5K651 1589 aa21.66■■□□□ 1.06
CDK7-211ENST00000514676 ARID3CA6NKF2 412 aa21.64■■□□□ 1.05
CDK7-211ENST00000514676 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
CDK7-211ENST00000514676 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
CDK7-211ENST00000514676 GLI2P10070 1586 aa21.59■■□□□ 1.05
CDK7-211ENST00000514676 FHOD3Q2V2M9 1422 aa21.59■■□□□ 1.05
CDK7-211ENST00000514676 WDR7Q9Y4E6 1490 aa21.56■■□□□ 1.04
CDK7-211ENST00000514676 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
CDK7-211ENST00000514676 PPRC1Q5VV67 1664 aaKnown RBP21.54■■□□□ 1.04
CDK7-211ENST00000514676 ATP10BO94823 1461 aa21.53■■□□□ 1.04
CDK7-211ENST00000514676 RAPGEF6Q8TEU7 1601 aa21.52■■□□□ 1.04
CDK7-211ENST00000514676 KDM6BO15054 1643 aa21.51■■□□□ 1.03
CDK7-211ENST00000514676 MAP3K4Q9Y6R4 1608 aa21.5■■□□□ 1.03
CDK7-211ENST00000514676 EFCAB5A4FU69 1503 aa21.49■■□□□ 1.03
CDK7-211ENST00000514676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.48■■□□□ 1.03
CDK7-211ENST00000514676 HNRNPUL2Q1KMD3 747 aaKnown RBP21.48■■□□□ 1.03
CDK7-211ENST00000514676 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.03
CDK7-211ENST00000514676 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
CDK7-211ENST00000514676 CD109Q6YHK3 1445 aa21.41■■□□□ 1.02
CDK7-211ENST00000514676 COL17A1Q9UMD9 1497 aaPredicted RBP21.4■■□□□ 1.02
CDK7-211ENST00000514676 TEX14Q8IWB6 1497 aa21.39■■□□□ 1.01
CDK7-211ENST00000514676 CFAP43Q8NDM7 1665 aa21.38■■□□□ 1.01
CDK7-211ENST00000514676 ATP1B4Q9UN42 357 aaPredicted RBP21.36■■□□□ 1.01
CDK7-211ENST00000514676 MAGI3Q5TCQ9 1506 aa21.34■■□□□ 1.01
CDK7-211ENST00000514676 CDK13Q14004 1512 aaKnown RBP21.32■■□□□ 1
CDK7-211ENST00000514676 PLEKHD1A6NEE1 506 aa21.31■■□□□ 1
CDK7-211ENST00000514676 FMN1Q68DA7 1419 aa21.3■■□□□ 1
CDK7-211ENST00000514676 ABCA9Q8IUA7 1624 aa21.3■■□□□ 1
CDK7-211ENST00000514676 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
CDK7-211ENST00000514676 HECW1Q76N89 1606 aa21.25■□□□□ 0.99
CDK7-211ENST00000514676 CLIP1P30622 1438 aa21.21■□□□□ 0.99
CDK7-211ENST00000514676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.19■□□□□ 0.98
CDK7-211ENST00000514676 LRRIQ1Q96JM4 1722 aa21.19■□□□□ 0.98
CDK7-211ENST00000514676 KDM4FA0A1W2PPD8 638 aa21.19■□□□□ 0.98
CDK7-211ENST00000514676 PCF11O94913 1555 aaKnown RBP21.17■□□□□ 0.98
CDK7-211ENST00000514676 TTC37Q6PGP7 1564 aa21.17■□□□□ 0.98
CDK7-211ENST00000514676 ARAP3Q8WWN8 1544 aa21.16■□□□□ 0.98
CDK7-211ENST00000514676 CASKIN1Q8WXD9 1431 aa21.14■□□□□ 0.98
CDK7-211ENST00000514676 RAPGEF3O95398 923 aa21.14■□□□□ 0.97
CDK7-211ENST00000514676 NEO1Q92859 1461 aa21.13■□□□□ 0.97
CDK7-211ENST00000514676 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
CDK7-211ENST00000514676 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
CDK7-211ENST00000514676 LOC105371045A0A1W2PR82 267 aa21.12■□□□□ 0.97
CDK7-211ENST00000514676 KIF14Q15058 1648 aa21.1■□□□□ 0.97
CDK7-211ENST00000514676 TROQ12816 1431 aaPredicted RBP21.09■□□□□ 0.97
CDK7-211ENST00000514676 FANCAO15360 1455 aa21.08■□□□□ 0.97
CDK7-211ENST00000514676 AKNAQ7Z591 1439 aa21.08■□□□□ 0.97
CDK7-211ENST00000514676 ADGRL1O94910 1474 aa21.07■□□□□ 0.96
CDK7-211ENST00000514676 PLCH2O75038 1416 aa21.05■□□□□ 0.96
CDK7-211ENST00000514676 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
CDK7-211ENST00000514676 CCDC18Q5T9S5 1454 aa21.05■□□□□ 0.96
CDK7-211ENST00000514676 FYCO1Q9BQS8 1478 aa21.05■□□□□ 0.96
CDK7-211ENST00000514676 FRMPD1Q5SYB0 1578 aa21.05■□□□□ 0.96
CDK7-211ENST00000514676 CFAP74Q9C0B2 1584 aa21.02■□□□□ 0.96
CDK7-211ENST00000514676 DENND4BO75064 1496 aaPredicted RBP21.02■□□□□ 0.96
CDK7-211ENST00000514676 MYO5CQ9NQX4 1742 aa21.01■□□□□ 0.95
CDK7-211ENST00000514676 EFCAB2Q5VUJ9 269 aa20.99■□□□□ 0.95
CDK7-211ENST00000514676 RICTORQ6R327 1708 aa20.98■□□□□ 0.95
CDK7-211ENST00000514676 SCAPERQ9BY12 1400 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms