RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 FAM69CQ0P6D2 419 aa19.87■□□□□ 0.77
DDX41-216ENST00000513562 MAPKBP1O60336 1514 aa19.86■□□□□ 0.77
DDX41-216ENST00000513562 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
DDX41-216ENST00000513562 DIP2BQ9P265 1576 aa19.82■□□□□ 0.76
DDX41-216ENST00000513562 NPM1P06748 294 aaKnown RBP eCLIP19.81■□□□□ 0.76
DDX41-216ENST00000513562 ADCY10Q96PN6 1610 aa19.77■□□□□ 0.76
DDX41-216ENST00000513562 KDM4FA0A1W2PPD8 638 aa19.77■□□□□ 0.76
DDX41-216ENST00000513562 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.76
DDX41-216ENST00000513562 KDM6BO15054 1643 aa19.74■□□□□ 0.75
DDX41-216ENST00000513562 KIAA0586Q9BVV6 1533 aa19.7■□□□□ 0.74
DDX41-216ENST00000513562 IGF1RP08069 1367 aa19.61■□□□□ 0.73
DDX41-216ENST00000513562 ILDR1Q86SU0 546 aaPredicted RBP19.59■□□□□ 0.73
DDX41-216ENST00000513562 PTPRGP23470 1445 aa19.59■□□□□ 0.73
DDX41-216ENST00000513562 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
DDX41-216ENST00000513562 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
DDX41-216ENST00000513562 CUL7Q14999 1698 aa19.56■□□□□ 0.72
DDX41-216ENST00000513562 TSPOAP1O95153 1857 aa19.55■□□□□ 0.72
DDX41-216ENST00000513562 TNIKQ9UKE5 1360 aa19.53■□□□□ 0.72
DDX41-216ENST00000513562 GLI2P10070 1586 aa19.53■□□□□ 0.72
DDX41-216ENST00000513562 ASXL2Q76L83 1435 aa19.52■□□□□ 0.72
DDX41-216ENST00000513562 PLB1Q6P1J6 1458 aa19.52■□□□□ 0.72
DDX41-216ENST00000513562 ADGRL1O94910 1474 aa19.5■□□□□ 0.71
DDX41-216ENST00000513562 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
DDX41-216ENST00000513562 PPRC1Q5VV67 1664 aaKnown RBP19.49■□□□□ 0.71
DDX41-216ENST00000513562 UHRF1BP1LA0JNW5 1464 aa19.48■□□□□ 0.71
DDX41-216ENST00000513562 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
DDX41-216ENST00000513562 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
DDX41-216ENST00000513562 COL17A1Q9UMD9 1497 aaPredicted RBP19.45■□□□□ 0.7
DDX41-216ENST00000513562 UACAQ9BZF9 1416 aa19.43■□□□□ 0.7
DDX41-216ENST00000513562 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
DDX41-216ENST00000513562 EPRSP07814 1512 aaKnown RBP19.41■□□□□ 0.7
DDX41-216ENST00000513562 DISP1Q96F81 1524 aa19.4■□□□□ 0.7
DDX41-216ENST00000513562 KDM5BQ9UGL1 1544 aa19.4■□□□□ 0.7
DDX41-216ENST00000513562 TEX14Q8IWB6 1497 aa19.38■□□□□ 0.69
DDX41-216ENST00000513562 MAP3K4Q9Y6R4 1608 aa19.37■□□□□ 0.69
DDX41-216ENST00000513562 HECW2Q9P2P5 1572 aa19.36■□□□□ 0.69
DDX41-216ENST00000513562 UGGT2Q9NYU1 1516 aa19.3■□□□□ 0.68
DDX41-216ENST00000513562 ZCCHC11Q5TAX3 1644 aaKnown RBP19.29■□□□□ 0.68
DDX41-216ENST00000513562 WDR7Q9Y4E6 1490 aa19.28■□□□□ 0.68
DDX41-216ENST00000513562 KIAA0556O60303 1618 aa19.25■□□□□ 0.67
DDX41-216ENST00000513562 RAPGEF2Q9Y4G8 1499 aa19.23■□□□□ 0.67
DDX41-216ENST00000513562 MAGI3Q5TCQ9 1506 aa19.21■□□□□ 0.67
DDX41-216ENST00000513562 CD109Q6YHK3 1445 aa19.18■□□□□ 0.66
DDX41-216ENST00000513562 CFAP43Q8NDM7 1665 aa19.14■□□□□ 0.65
DDX41-216ENST00000513562 ABCA8O94911 1581 aa19.12■□□□□ 0.65
DDX41-216ENST00000513562 KCNH8Q96L42 1107 aa19.1■□□□□ 0.65
DDX41-216ENST00000513562 GOLGA3Q08378 1498 aa19.09■□□□□ 0.65
DDX41-216ENST00000513562 FBXO41Q8TF61 875 aa19.09■□□□□ 0.65
DDX41-216ENST00000513562 ARAP3Q8WWN8 1544 aa19.07■□□□□ 0.64
DDX41-216ENST00000513562 KIF21BO75037 1637 aa19.07■□□□□ 0.64
DDX41-216ENST00000513562 CTTNBP2Q8WZ74 1663 aa19.01■□□□□ 0.63
DDX41-216ENST00000513562 PTPRMP28827 1452 aa19.01■□□□□ 0.63
DDX41-216ENST00000513562 PHLDB1Q86UU1 1377 aa18.99■□□□□ 0.63
DDX41-216ENST00000513562 ADAMTSL3P82987 1691 aa18.97■□□□□ 0.63
DDX41-216ENST00000513562 ATP10BO94823 1461 aa18.96■□□□□ 0.63
DDX41-216ENST00000513562 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
DDX41-216ENST00000513562 ABCA9Q8IUA7 1624 aa18.93■□□□□ 0.62
DDX41-216ENST00000513562 NEO1Q92859 1461 aa18.92■□□□□ 0.62
DDX41-216ENST00000513562 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
DDX41-216ENST00000513562 RAPGEF3O95398 923 aa18.92■□□□□ 0.62
DDX41-216ENST00000513562 PCF11O94913 1555 aaKnown RBP18.91■□□□□ 0.62
DDX41-216ENST00000513562 LMTK3Q96Q04 1460 aa18.9■□□□□ 0.62
DDX41-216ENST00000513562 FRMPD1Q5SYB0 1578 aa18.88■□□□□ 0.61
DDX41-216ENST00000513562 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
DDX41-216ENST00000513562 FAM9AQ8IZU1 332 aaPredicted RBP18.87■□□□□ 0.61
DDX41-216ENST00000513562 MADDQ8WXG6 1647 aa18.86■□□□□ 0.61
DDX41-216ENST00000513562 P3H3Q8IVL6 736 aa18.84■□□□□ 0.61
DDX41-216ENST00000513562 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.61
DDX41-216ENST00000513562 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
DDX41-216ENST00000513562 SAMD9Q5K651 1589 aa18.8■□□□□ 0.6
DDX41-216ENST00000513562 RAPGEF6Q8TEU7 1601 aa18.79■□□□□ 0.6
DDX41-216ENST00000513562 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.6
DDX41-216ENST00000513562 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.59
DDX41-216ENST00000513562 FHOD3Q2V2M9 1422 aa18.76■□□□□ 0.59
DDX41-216ENST00000513562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
DDX41-216ENST00000513562 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
DDX41-216ENST00000513562 RIMS1Q86UR5 1692 aaKnown RBP18.74■□□□□ 0.59
DDX41-216ENST00000513562 HSPA2P54652 639 aa18.73■□□□□ 0.59
DDX41-216ENST00000513562 AKNAQ7Z591 1439 aa18.73■□□□□ 0.59
DDX41-216ENST00000513562 POGZQ7Z3K3 1410 aa18.72■□□□□ 0.59
DDX41-216ENST00000513562 FANCAO15360 1455 aa18.71■□□□□ 0.59
DDX41-216ENST00000513562 ZMYM4Q5VZL5 1548 aa18.71■□□□□ 0.59
DDX41-216ENST00000513562 RICTORQ6R327 1708 aa18.71■□□□□ 0.59
DDX41-216ENST00000513562 CERKQ8TCT0 537 aa18.68■□□□□ 0.58
DDX41-216ENST00000513562 ZFYVE16Q7Z3T8 1539 aa18.68■□□□□ 0.58
DDX41-216ENST00000513562 CFAP74Q9C0B2 1584 aa18.68■□□□□ 0.58
DDX41-216ENST00000513562 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
DDX41-216ENST00000513562 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
DDX41-216ENST00000513562 EFCAB5A4FU69 1503 aa18.67■□□□□ 0.58
DDX41-216ENST00000513562 MAGI2Q86UL8 1455 aa18.66■□□□□ 0.58
DDX41-216ENST00000513562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.66■□□□□ 0.58
DDX41-216ENST00000513562 SIGLEC1Q9BZZ2 1709 aa18.65■□□□□ 0.58
DDX41-216ENST00000513562 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
DDX41-216ENST00000513562 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
DDX41-216ENST00000513562 TTC37Q6PGP7 1564 aa18.63■□□□□ 0.57
DDX41-216ENST00000513562 HECW1Q76N89 1606 aa18.6■□□□□ 0.57
DDX41-216ENST00000513562 MLECQ14165 292 aa18.59■□□□□ 0.57
DDX41-216ENST00000513562 ARHGEF12Q9NZN5 1544 aa18.58■□□□□ 0.56
DDX41-216ENST00000513562 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
DDX41-216ENST00000513562 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms