RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	CSRNP3	Q8WYN3	585 aa		14.6	□□□□□ -0.07
ACSF2-223	ENST00000513101	RAPGEF2	Q9Y4G8	1499 aa		14.59	□□□□□ -0.07
ACSF2-223	ENST00000513101	KIAA0586	Q9BVV6	1533 aa		14.59	□□□□□ -0.07
ACSF2-223	ENST00000513101	CYB5RL	Q6IPT4	315 aa		14.58	□□□□□ -0.08
ACSF2-223	ENST00000513101	PRX	Q9BXM0	1461 aa		14.57	□□□□□ -0.08
ACSF2-223	ENST00000513101	ARAP1	Q96P48	1450 aa		14.56	□□□□□ -0.08
ACSF2-223	ENST00000513101	PRG4	Q92954	1404 aa	Predicted RBP	14.53	□□□□□ -0.08
ACSF2-223	ENST00000513101	SHROOM2	Q13796	1616 aa		14.52	□□□□□ -0.08
ACSF2-223	ENST00000513101	FAM9A	Q8IZU1	332 aa	Predicted RBP	14.49	□□□□□ -0.09
ACSF2-223	ENST00000513101	ERCC6L2	Q5T890	1561 aa		14.47	□□□□□ -0.09
ACSF2-223	ENST00000513101	IQGAP2	Q13576	1575 aa		14.44	□□□□□ -0.1
ACSF2-223	ENST00000513101	CARMIL2	Q6F5E8	1435 aa		14.44	□□□□□ -0.1
ACSF2-223	ENST00000513101	UGGT2	Q9NYU1	1516 aa		14.41	□□□□□ -0.1
ACSF2-223	ENST00000513101	TNIK	Q9UKE5	1360 aa		14.39	□□□□□ -0.11
ACSF2-223	ENST00000513101	PTPRG	P23470	1445 aa		14.39	□□□□□ -0.11
ACSF2-223	ENST00000513101	DISP1	Q96F81	1524 aa		14.37	□□□□□ -0.11
ACSF2-223	ENST00000513101	TRH	P20396	242 aa	Predicted RBP	14.37	□□□□□ -0.11
ACSF2-223	ENST00000513101	KIF21B	O75037	1637 aa		14.35	□□□□□ -0.11
ACSF2-223	ENST00000513101	GOLGA3	Q08378	1498 aa		14.34	□□□□□ -0.11
ACSF2-223	ENST00000513101	UBTF	P17480	764 aa	Known RBP	14.32	□□□□□ -0.12
ACSF2-223	ENST00000513101	CTTNBP2	Q8WZ74	1663 aa		14.32	□□□□□ -0.12
ACSF2-223	ENST00000513101	NPM1	P06748	294 aa	Known RBP eCLIP	14.3	□□□□□ -0.12
ACSF2-223	ENST00000513101	TTBK1	Q5TCY1	1321 aa	Predicted RBP	14.3	□□□□□ -0.12
ACSF2-223	ENST00000513101	KIAA0556	O60303	1618 aa		14.3	□□□□□ -0.12
ACSF2-223	ENST00000513101	UACA	Q9BZF9	1416 aa		14.28	□□□□□ -0.12
ACSF2-223	ENST00000513101	UHRF1BP1L	A0JNW5	1464 aa		14.26	□□□□□ -0.13
ACSF2-223	ENST00000513101	EHMT2	Q96KQ7	1210 aa		14.26	□□□□□ -0.13
ACSF2-223	ENST00000513101	P3H3	Q8IVL6	736 aa		14.25	□□□□□ -0.13
ACSF2-223	ENST00000513101	ADCY10	Q96PN6	1610 aa		14.23	□□□□□ -0.13
ACSF2-223	ENST00000513101	RANGAP1	P46060	587 aa	Predicted RBP	14.22	□□□□□ -0.13
ACSF2-223	ENST00000513101	ABCC2	Q92887	1545 aa		14.21	□□□□□ -0.13
ACSF2-223	ENST00000513101	SAMD9	Q5K651	1589 aa		14.21	□□□□□ -0.14
ACSF2-223	ENST00000513101	PLB1	Q6P1J6	1458 aa		14.18	□□□□□ -0.14
ACSF2-223	ENST00000513101	EFCAB5	A4FU69	1503 aa		14.18	□□□□□ -0.14
ACSF2-223	ENST00000513101	MAPKBP1	O60336	1514 aa		14.18	□□□□□ -0.14
ACSF2-223	ENST00000513101	KDM5B	Q9UGL1	1544 aa		14.18	□□□□□ -0.14
ACSF2-223	ENST00000513101	ABCA8	O94911	1581 aa		14.17	□□□□□ -0.14
ACSF2-223	ENST00000513101	FHOD3	Q2V2M9	1422 aa		14.16	□□□□□ -0.14
ACSF2-223	ENST00000513101	ABCC10	Q5T3U5	1492 aa		14.14	□□□□□ -0.15
ACSF2-223	ENST00000513101	ARHGAP35	Q9NRY4	1499 aa		14.13	□□□□□ -0.15
ACSF2-223	ENST00000513101	FAM69C	Q0P6D2	419 aa		14.13	□□□□□ -0.15
ACSF2-223	ENST00000513101	ASXL2	Q76L83	1435 aa		14.13	□□□□□ -0.15
ACSF2-223	ENST00000513101	FMN1	Q68DA7	1419 aa		14.09	□□□□□ -0.15
ACSF2-223	ENST00000513101	ATP10B	O94823	1461 aa		14.09	□□□□□ -0.15
ACSF2-223	ENST00000513101	CLIP1	P30622	1438 aa		14.07	□□□□□ -0.16
ACSF2-223	ENST00000513101	LOC105371045	A0A1W2PR82	267 aa		14.07	□□□□□ -0.16
ACSF2-223	ENST00000513101	ZCCHC11	Q5TAX3	1644 aa	Known RBP	14.06	□□□□□ -0.16
ACSF2-223	ENST00000513101	RAPGEF6	Q8TEU7	1601 aa		14.06	□□□□□ -0.16
ACSF2-223	ENST00000513101	NUP153	P49790	1475 aa	Known RBP	14.06	□□□□□ -0.16
ACSF2-223	ENST00000513101	WDR7	Q9Y4E6	1490 aa		14.06	□□□□□ -0.16
ACSF2-223	ENST00000513101	DIP2B	Q9P265	1576 aa		14.05	□□□□□ -0.16
ACSF2-223	ENST00000513101	ARID3C	A6NKF2	412 aa		14.05	□□□□□ -0.16
ACSF2-223	ENST00000513101	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.04	□□□□□ -0.16
ACSF2-223	ENST00000513101	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.04	□□□□□ -0.16
ACSF2-223	ENST00000513101	EPRS	P07814	1512 aa	Known RBP	14.04	□□□□□ -0.16
ACSF2-223	ENST00000513101	ILDR1	Q86SU0	546 aa	Predicted RBP	14.03	□□□□□ -0.16
ACSF2-223	ENST00000513101	GLI2	P10070	1586 aa		14.02	□□□□□ -0.16
ACSF2-223	ENST00000513101	PLEKHD1	A6NEE1	506 aa		14.02	□□□□□ -0.17
ACSF2-223	ENST00000513101	KCNH8	Q96L42	1107 aa		14.02	□□□□□ -0.17
ACSF2-223	ENST00000513101	PHF23	Q9BUL5	403 aa	Predicted RBP	14.02	□□□□□ -0.17
ACSF2-223	ENST00000513101	CEP162	Q5TB80	1403 aa		14	□□□□□ -0.17
ACSF2-223	ENST00000513101	ATP1B4	Q9UN42	357 aa	Predicted RBP	14	□□□□□ -0.17
ACSF2-223	ENST00000513101	KIF13A	Q9H1H9	1805 aa		13.99	□□□□□ -0.17
ACSF2-223	ENST00000513101	CASKIN1	Q8WXD9	1431 aa		13.98	□□□□□ -0.17
ACSF2-223	ENST00000513101	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.98	□□□□□ -0.17
ACSF2-223	ENST00000513101	HECW1	Q76N89	1606 aa		13.95	□□□□□ -0.18
ACSF2-223	ENST00000513101	CD109	Q6YHK3	1445 aa		13.95	□□□□□ -0.18
ACSF2-223	ENST00000513101	CDK13	Q14004	1512 aa	Known RBP	13.93	□□□□□ -0.18
ACSF2-223	ENST00000513101	FYCO1	Q9BQS8	1478 aa		13.92	□□□□□ -0.18
ACSF2-223	ENST00000513101	MAGI3	Q5TCQ9	1506 aa		13.91	□□□□□ -0.18
ACSF2-223	ENST00000513101	CCDC18	Q5T9S5	1454 aa		13.91	□□□□□ -0.18
ACSF2-223	ENST00000513101	TEX14	Q8IWB6	1497 aa		13.91	□□□□□ -0.18
ACSF2-223	ENST00000513101	MAP3K4	Q9Y6R4	1608 aa		13.9	□□□□□ -0.18
ACSF2-223	ENST00000513101	TRO	Q12816	1431 aa	Predicted RBP	13.88	□□□□□ -0.19
ACSF2-223	ENST00000513101	CFAP43	Q8NDM7	1665 aa		13.88	□□□□□ -0.19
ACSF2-223	ENST00000513101	PCF11	O94913	1555 aa	Known RBP	13.88	□□□□□ -0.19
ACSF2-223	ENST00000513101	PHLDB1	Q86UU1	1377 aa		13.87	□□□□□ -0.19
ACSF2-223	ENST00000513101	ABCA9	Q8IUA7	1624 aa		13.86	□□□□□ -0.19
ACSF2-223	ENST00000513101	PPRC1	Q5VV67	1664 aa	Known RBP	13.85	□□□□□ -0.19
ACSF2-223	ENST00000513101	VPS8	Q8N3P4	1428 aa		13.85	□□□□□ -0.19
ACSF2-223	ENST00000513101	TSPOAP1	O95153	1857 aa		13.84	□□□□□ -0.19
ACSF2-223	ENST00000513101	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
ACSF2-223	ENST00000513101	NEO1	Q92859	1461 aa		13.82	□□□□□ -0.2
ACSF2-223	ENST00000513101	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.82	□□□□□ -0.2
ACSF2-223	ENST00000513101	PLCH2	O75038	1416 aa		13.81	□□□□□ -0.2
ACSF2-223	ENST00000513101	KDM6B	O15054	1643 aa		13.81	□□□□□ -0.2
ACSF2-223	ENST00000513101	EFCAB2	Q5VUJ9	269 aa		13.79	□□□□□ -0.2
ACSF2-223	ENST00000513101	MTUS2	Q5JR59	1369 aa		13.79	□□□□□ -0.2
ACSF2-223	ENST00000513101	ARAP3	Q8WWN8	1544 aa		13.79	□□□□□ -0.2
ACSF2-223	ENST00000513101	LRRIQ1	Q96JM4	1722 aa		13.78	□□□□□ -0.2
ACSF2-223	ENST00000513101	KIF14	Q15058	1648 aa		13.77	□□□□□ -0.21
ACSF2-223	ENST00000513101	TTC37	Q6PGP7	1564 aa		13.77	□□□□□ -0.21
ACSF2-223	ENST00000513101	SENP3	Q9H4L4	574 aa	Predicted RBP	13.77	□□□□□ -0.21
ACSF2-223	ENST00000513101	FANCA	O15360	1455 aa		13.76	□□□□□ -0.21
ACSF2-223	ENST00000513101	AKNA	Q7Z591	1439 aa		13.76	□□□□□ -0.21
ACSF2-223	ENST00000513101	MAP3K1	Q13233	1512 aa		13.74	□□□□□ -0.21
ACSF2-223	ENST00000513101	RAPGEF3	O95398	923 aa		13.73	□□□□□ -0.21
ACSF2-223	ENST00000513101	APLP2	Q06481	763 aa		13.72	□□□□□ -0.21
ACSF2-223	ENST00000513101	DENND4B	O75064	1496 aa	Predicted RBP	13.72	□□□□□ -0.21
ACSF2-223	ENST00000513101	EHBP1L1	Q8N3D4	1523 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms