RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, humanhuman

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF2-223ENST00000513101 NISCHQ9Y2I1 1504 aa21.05■□□□□ 0.96
ACSF2-223ENST00000513101 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
ACSF2-223ENST00000513101 ABCC9O60706 1549 aa18.23■□□□□ 0.51
ACSF2-223ENST00000513101 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
ACSF2-223ENST00000513101 NACADO15069 1562 aa17.57■□□□□ 0.4
ACSF2-223ENST00000513101 RB1CC1Q8TDY2 1594 aa17.56■□□□□ 0.4
ACSF2-223ENST00000513101 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
ACSF2-223ENST00000513101 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.4
ACSF2-223ENST00000513101 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
ACSF2-223ENST00000513101 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
ACSF2-223ENST00000513101 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.336e-6■■■■□ 21.1
ACSF2-223ENST00000513101 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
ACSF2-223ENST00000513101 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
ACSF2-223ENST00000513101 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
ACSF2-223ENST00000513101 SHROOM4Q9ULL8 1493 aa16.91■□□□□ 0.3
ACSF2-223ENST00000513101 EIF4G1Q04637 1599 aaKnown RBP16.56■□□□□ 0.24
ACSF2-223ENST00000513101 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.23
ACSF2-223ENST00000513101 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
ACSF2-223ENST00000513101 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
ACSF2-223ENST00000513101 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
ACSF2-223ENST00000513101 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
ACSF2-223ENST00000513101 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
ACSF2-223ENST00000513101 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
ACSF2-223ENST00000513101 SMARCA2P51531 1590 aa16.21■□□□□ 0.18
ACSF2-223ENST00000513101 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
ACSF2-223ENST00000513101 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
ACSF2-223ENST00000513101 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
ACSF2-223ENST00000513101 HMGXB3Q12766 1538 aa16.13■□□□□ 0.17
ACSF2-223ENST00000513101 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
ACSF2-223ENST00000513101 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.16
ACSF2-223ENST00000513101 CHIC1Q5VXU3 224 aa15.98■□□□□ 0.15
ACSF2-223ENST00000513101 WIZO95785 1651 aa15.97■□□□□ 0.15
ACSF2-223ENST00000513101 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
ACSF2-223ENST00000513101 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
ACSF2-223ENST00000513101 NESP48681 1621 aa15.78■□□□□ 0.12
ACSF2-223ENST00000513101 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
ACSF2-223ENST00000513101 ERCC6Q03468 1493 aa15.72■□□□□ 0.11
ACSF2-223ENST00000513101 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
ACSF2-223ENST00000513101 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
ACSF2-223ENST00000513101 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
ACSF2-223ENST00000513101 CFTRP13569 1480 aa15.69■□□□□ 0.1
ACSF2-223ENST00000513101 CUX2O14529 1486 aa15.58■□□□□ 0.08
ACSF2-223ENST00000513101 FANCD2Q9BXW9 1451 aa15.56■□□□□ 0.08
ACSF2-223ENST00000513101 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
ACSF2-223ENST00000513101 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
ACSF2-223ENST00000513101 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
ACSF2-223ENST00000513101 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
ACSF2-223ENST00000513101 WDR62O43379 1518 aa15.43■□□□□ 0.06
ACSF2-223ENST00000513101 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
ACSF2-223ENST00000513101 PRDM2Q13029 1718 aa15.38■□□□□ 0.05
ACSF2-223ENST00000513101 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
ACSF2-223ENST00000513101 TOPBP1Q92547 1522 aa15.31■□□□□ 0.04
ACSF2-223ENST00000513101 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
ACSF2-223ENST00000513101 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
ACSF2-223ENST00000513101 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
ACSF2-223ENST00000513101 CUX1P39880 1505 aa15.19■□□□□ 0.02
ACSF2-223ENST00000513101 POLA1P09884 1462 aaPredicted RBP15.19■□□□□ 0.02
ACSF2-223ENST00000513101 SOGA1O94964 1423 aa15.16■□□□□ 0.02
ACSF2-223ENST00000513101 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
ACSF2-223ENST00000513101 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
ACSF2-223ENST00000513101 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
ACSF2-223ENST00000513101 RAD54L2Q9Y4B4 1467 aa15.11■□□□□ 0.01
ACSF2-223ENST00000513101 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
ACSF2-223ENST00000513101 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 03e-7■■■□□ 16
ACSF2-223ENST00000513101 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
ACSF2-223ENST00000513101 TOP2BQ02880 1626 aa15.06■□□□□ 0
ACSF2-223ENST00000513101 SYNJ1O43426 1573 aa15.03■□□□□ -0
ACSF2-223ENST00000513101 BIVM-ERCC5R4GMW8 1640 aa15.03■□□□□ -0
ACSF2-223ENST00000513101 ABCA10Q8WWZ4 1543 aa15.02■□□□□ -0
ACSF2-223ENST00000513101 WDR97A6NE52 1622 aa15.02□□□□□ -0.01
ACSF2-223ENST00000513101 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
ACSF2-223ENST00000513101 OSCARQ8IYS5 282 aa14.99□□□□□ -0.01
ACSF2-223ENST00000513101 GRIN2BQ13224 1484 aa14.97□□□□□ -0.01
ACSF2-223ENST00000513101 GAPVD1Q14C86 1478 aa14.96□□□□□ -0.01
ACSF2-223ENST00000513101 MAGI1Q96QZ7 1491 aaPredicted RBP14.91□□□□□ -0.02
ACSF2-223ENST00000513101 SNAPC4Q5SXM2 1469 aa14.9□□□□□ -0.02
ACSF2-223ENST00000513101 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
ACSF2-223ENST00000513101 ABCA5Q8WWZ7 1642 aa14.89□□□□□ -0.03
ACSF2-223ENST00000513101 FBLN2P98095 1184 aa14.89□□□□□ -0.03
ACSF2-223ENST00000513101 SYNJ2O15056 1496 aa14.85□□□□□ -0.03
ACSF2-223ENST00000513101 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
ACSF2-223ENST00000513101 ERICH3Q5RHP9 1530 aa14.83□□□□□ -0.04
ACSF2-223ENST00000513101 FHAD1B1AJZ9 1412 aa14.82□□□□□ -0.04
ACSF2-223ENST00000513101 IGF1RP08069 1367 aa14.8□□□□□ -0.04
ACSF2-223ENST00000513101 PBRM1Q86U86 1689 aa14.8□□□□□ -0.04
ACSF2-223ENST00000513101 CHD1O14646 1710 aa14.76□□□□□ -0.05
ACSF2-223ENST00000513101 ADAMTS12P58397 1594 aa14.75□□□□□ -0.05
ACSF2-223ENST00000513101 GRIN2AQ12879 1464 aa14.75□□□□□ -0.05
ACSF2-223ENST00000513101 NUP160Q12769 1436 aa14.71□□□□□ -0.05
ACSF2-223ENST00000513101 CARMIL1Q5VZK9 1371 aa14.71□□□□□ -0.06
ACSF2-223ENST00000513101 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
ACSF2-223ENST00000513101 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
ACSF2-223ENST00000513101 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
ACSF2-223ENST00000513101 CUL7Q14999 1698 aa14.65□□□□□ -0.06
ACSF2-223ENST00000513101 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
ACSF2-223ENST00000513101 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
ACSF2-223ENST00000513101 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
ACSF2-223ENST00000513101 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
ACSF2-223ENST00000513101 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
ACSF2-223ENST00000513101 EEA1Q15075 1411 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms