RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 CEP170Q5SW79 1584 aa22■■□□□ 1.11
RACK1-230ENST00000513060 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
RACK1-230ENST00000513060 OSCARQ8IYS5 282 aa21.98■■□□□ 1.11
RACK1-230ENST00000513060 KIAA0586Q9BVV6 1533 aa21.98■■□□□ 1.11
RACK1-230ENST00000513060 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
RACK1-230ENST00000513060 IQGAP2Q13576 1575 aa21.91■■□□□ 1.1
RACK1-230ENST00000513060 CEP162Q5TB80 1403 aa21.9■■□□□ 1.1
RACK1-230ENST00000513060 JPH4Q96JJ6 628 aa21.89■■□□□ 1.1
RACK1-230ENST00000513060 CLIP1P30622 1438 aa21.86■■□□□ 1.09
RACK1-230ENST00000513060 CLASP1Q7Z460 1538 aa21.85■■□□□ 1.09
RACK1-230ENST00000513060 UGGT2Q9NYU1 1516 aa21.81■■□□□ 1.08
RACK1-230ENST00000513060 P3H3Q8IVL6 736 aa21.81■■□□□ 1.08
RACK1-230ENST00000513060 ARHGAP35Q9NRY4 1499 aa21.78■■□□□ 1.08
RACK1-230ENST00000513060 PRG4Q92954 1404 aaPredicted RBP21.76■■□□□ 1.07
RACK1-230ENST00000513060 EFCAB5A4FU69 1503 aa21.74■■□□□ 1.07
RACK1-230ENST00000513060 DISP1Q96F81 1524 aa21.74■■□□□ 1.07
RACK1-230ENST00000513060 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
RACK1-230ENST00000513060 CARMIL2Q6F5E8 1435 aa21.73■■□□□ 1.07
RACK1-230ENST00000513060 SAMD9Q5K651 1589 aa21.72■■□□□ 1.07
RACK1-230ENST00000513060 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
RACK1-230ENST00000513060 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
RACK1-230ENST00000513060 KIAA0556O60303 1618 aa21.67■■□□□ 1.06
RACK1-230ENST00000513060 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
RACK1-230ENST00000513060 ERCC6L2Q5T890 1561 aa21.65■■□□□ 1.06
RACK1-230ENST00000513060 PTPRGP23470 1445 aa21.59■■□□□ 1.05
RACK1-230ENST00000513060 FMN1Q68DA7 1419 aa21.58■■□□□ 1.05
RACK1-230ENST00000513060 VPS8Q8N3P4 1428 aa21.58■■□□□ 1.04
RACK1-230ENST00000513060 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
RACK1-230ENST00000513060 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
RACK1-230ENST00000513060 PLB1Q6P1J6 1458 aa21.48■■□□□ 1.03
RACK1-230ENST00000513060 CASKIN1Q8WXD9 1431 aa21.47■■□□□ 1.03
RACK1-230ENST00000513060 RIMBP3CA6NJZ7 1639 aa21.45■■□□□ 1.02
RACK1-230ENST00000513060 RIMBP3BA6NNM3 1639 aa21.45■■□□□ 1.02
RACK1-230ENST00000513060 RIMBP3Q9UFD9 1639 aa21.45■■□□□ 1.02
RACK1-230ENST00000513060 UACAQ9BZF9 1416 aa21.44■■□□□ 1.02
RACK1-230ENST00000513060 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
RACK1-230ENST00000513060 FYCO1Q9BQS8 1478 aa21.43■■□□□ 1.02
RACK1-230ENST00000513060 CYB5RLQ6IPT4 315 aa21.42■■□□□ 1.02
RACK1-230ENST00000513060 ABCA8O94911 1581 aa21.41■■□□□ 1.02
RACK1-230ENST00000513060 ARID3CA6NKF2 412 aa21.41■■□□□ 1.02
RACK1-230ENST00000513060 APLP2Q06481 763 aa21.41■■□□□ 1.02
RACK1-230ENST00000513060 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
RACK1-230ENST00000513060 RAPGEF6Q8TEU7 1601 aa21.41■■□□□ 1.02
RACK1-230ENST00000513060 NUP153P49790 1475 aaKnown RBP21.38■■□□□ 1.01
RACK1-230ENST00000513060 HECW1Q76N89 1606 aa21.36■■□□□ 1.01
RACK1-230ENST00000513060 ABCC2Q92887 1545 aa21.35■■□□□ 1.01
RACK1-230ENST00000513060 UHRF1BP1LA0JNW5 1464 aa21.34■■□□□ 1.01
RACK1-230ENST00000513060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.34■■□□□ 1.01
RACK1-230ENST00000513060 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
RACK1-230ENST00000513060 EPRSP07814 1512 aaKnown RBP21.33■■□□□ 1.01
RACK1-230ENST00000513060 ATP10BO94823 1461 aa21.3■■□□□ 1
RACK1-230ENST00000513060 CCDC18Q5T9S5 1454 aa21.3■■□□□ 1
RACK1-230ENST00000513060 PPARGC1BQ86YN6 1023 aaKnown RBP21.3■■□□□ 1
RACK1-230ENST00000513060 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
RACK1-230ENST00000513060 ADCY10Q96PN6 1610 aa21.29■■□□□ 1
RACK1-230ENST00000513060 KANK4Q5T7N3 995 aaPredicted RBP21.28■■□□□ 1
RACK1-230ENST00000513060 MAP3K1Q13233 1512 aa21.27■■□□□ 1
RACK1-230ENST00000513060 LRRIQ1Q96JM4 1722 aa21.27■■□□□ 1
RACK1-230ENST00000513060 NPM1P06748 294 aaKnown RBP eCLIP21.26■□□□□ 0.99
RACK1-230ENST00000513060 TIAM1Q13009 1591 aa21.26■□□□□ 0.99
RACK1-230ENST00000513060 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
RACK1-230ENST00000513060 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
RACK1-230ENST00000513060 PLEKHD1A6NEE1 506 aa21.21■□□□□ 0.99
RACK1-230ENST00000513060 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
RACK1-230ENST00000513060 CFAP43Q8NDM7 1665 aa21.2■□□□□ 0.98
RACK1-230ENST00000513060 LRRC9Q6ZRR7 1453 aa21.2■□□□□ 0.98
RACK1-230ENST00000513060 ZCCHC11Q5TAX3 1644 aaKnown RBP21.18■□□□□ 0.98
RACK1-230ENST00000513060 MAGI3Q5TCQ9 1506 aa21.16■□□□□ 0.98
RACK1-230ENST00000513060 TROQ12816 1431 aaPredicted RBP21.13■□□□□ 0.97
RACK1-230ENST00000513060 KCNH8Q96L42 1107 aa21.11■□□□□ 0.97
RACK1-230ENST00000513060 ASXL2Q76L83 1435 aa21.11■□□□□ 0.97
RACK1-230ENST00000513060 EHBP1L1Q8N3D4 1523 aa21.1■□□□□ 0.97
RACK1-230ENST00000513060 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
RACK1-230ENST00000513060 NCOA2Q15596 1464 aa21.04■□□□□ 0.96
RACK1-230ENST00000513060 MAPKBP1O60336 1514 aa21.03■□□□□ 0.96
RACK1-230ENST00000513060 SUPT6HQ7KZ85 1726 aaKnown RBP21.01■□□□□ 0.95
RACK1-230ENST00000513060 KIF14Q15058 1648 aa21.01■□□□□ 0.95
RACK1-230ENST00000513060 PHLDB1Q86UU1 1377 aa21■□□□□ 0.95
RACK1-230ENST00000513060 CCNB3Q8WWL7 1395 aa20.97■□□□□ 0.95
RACK1-230ENST00000513060 ABCC10Q5T3U5 1492 aa20.96■□□□□ 0.95
RACK1-230ENST00000513060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.94■□□□□ 0.941e-34■■□□□ 13
RACK1-230ENST00000513060 FAM69CQ0P6D2 419 aa20.92■□□□□ 0.94
RACK1-230ENST00000513060 MYOM3Q5VTT5 1437 aa20.92■□□□□ 0.94
RACK1-230ENST00000513060 GPATCH8Q9UKJ3 1502 aaKnown RBP20.91■□□□□ 0.94
RACK1-230ENST00000513060 TTC37Q6PGP7 1564 aa20.9■□□□□ 0.94
RACK1-230ENST00000513060 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.94
RACK1-230ENST00000513060 FGD6Q6ZV73 1430 aa20.87■□□□□ 0.93
RACK1-230ENST00000513060 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
RACK1-230ENST00000513060 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
RACK1-230ENST00000513060 PLCH2O75038 1416 aa20.85■□□□□ 0.93
RACK1-230ENST00000513060 CD109Q6YHK3 1445 aa20.85■□□□□ 0.93
RACK1-230ENST00000513060 MIA2Q96PC5 1412 aa20.85■□□□□ 0.93
RACK1-230ENST00000513060 RRBP1Q9P2E9 1410 aaKnown RBP20.85■□□□□ 0.93
RACK1-230ENST00000513060 DIP2BQ9P265 1576 aa20.85■□□□□ 0.93
RACK1-230ENST00000513060 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
RACK1-230ENST00000513060 GLI2P10070 1586 aa20.83■□□□□ 0.93
RACK1-230ENST00000513060 FAM50AQ14320 339 aaKnown RBP20.83■□□□□ 0.93
RACK1-230ENST00000513060 CDC42BPAQ5VT25 1732 aa20.82■□□□□ 0.92
RACK1-230ENST00000513060 ZNF644Q9H582 1327 aaPredicted RBP20.82■□□□□ 0.92
RACK1-230ENST00000513060 EFCAB2Q5VUJ9 269 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms