RNA–Protein interactions for RNA: ENST00000512649.1

SERF1A-207, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2 BASIC

Gene SERF1A, Length 846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-207ENST00000512649 ERCC6L2Q5T890 1561 aa28.02■■■□□ 2.08
SERF1A-207ENST00000512649 PRG4Q92954 1404 aaPredicted RBP28.01■■■□□ 2.08
SERF1A-207ENST00000512649 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
SERF1A-207ENST00000512649 RUSC2Q8N2Y8 1516 aa27.96■■■□□ 2.07
SERF1A-207ENST00000512649 KIAA0586Q9BVV6 1533 aa27.96■■■□□ 2.07
SERF1A-207ENST00000512649 RAPGEF2Q9Y4G8 1499 aa27.86■■■□□ 2.05
SERF1A-207ENST00000512649 CARMIL2Q6F5E8 1435 aa27.75■■■□□ 2.03
SERF1A-207ENST00000512649 NPM1P06748 294 aaKnown RBP eCLIP27.74■■■□□ 2.03
SERF1A-207ENST00000512649 IQGAP2Q13576 1575 aa27.73■■■□□ 2.03
SERF1A-207ENST00000512649 TTBK1Q5TCY1 1321 aaPredicted RBP27.73■■■□□ 2.03
SERF1A-207ENST00000512649 PTPRGP23470 1445 aa27.67■■■□□ 2.02
SERF1A-207ENST00000512649 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
SERF1A-207ENST00000512649 TNIKQ9UKE5 1360 aa27.65■■■□□ 2.02
SERF1A-207ENST00000512649 PRXQ9BXM0 1461 aa27.64■■■□□ 2.01
SERF1A-207ENST00000512649 FAM9AQ8IZU1 332 aaPredicted RBP27.58■■■□□ 2.01
SERF1A-207ENST00000512649 EEA1Q15075 1411 aa27.58■■■□□ 2
SERF1A-207ENST00000512649 UGGT2Q9NYU1 1516 aa27.56■■■□□ 2
SERF1A-207ENST00000512649 CHIC1Q5VXU3 224 aa27.55■■■□□ 2
SERF1A-207ENST00000512649 DISP1Q96F81 1524 aa27.55■■■□□ 2
SERF1A-207ENST00000512649 ADCY10Q96PN6 1610 aa27.54■■■□□ 2
SERF1A-207ENST00000512649 CTTNBP2Q8WZ74 1663 aa27.52■■■□□ 2
SERF1A-207ENST00000512649 GOLGA3Q08378 1498 aa27.46■■□□□ 1.99
SERF1A-207ENST00000512649 FAM69CQ0P6D2 419 aa27.46■■□□□ 1.99
SERF1A-207ENST00000512649 UACAQ9BZF9 1416 aa27.45■■□□□ 1.98
SERF1A-207ENST00000512649 KIAA0556O60303 1618 aa27.45■■□□□ 1.98
SERF1A-207ENST00000512649 MAPKBP1O60336 1514 aa27.43■■□□□ 1.98
SERF1A-207ENST00000512649 ABCC2Q92887 1545 aa27.39■■□□□ 1.98
SERF1A-207ENST00000512649 UHRF1BP1LA0JNW5 1464 aa27.38■■□□□ 1.97
SERF1A-207ENST00000512649 ABCC10Q5T3U5 1492 aa27.38■■□□□ 1.97
SERF1A-207ENST00000512649 P3H3Q8IVL6 736 aa27.35■■□□□ 1.97
SERF1A-207ENST00000512649 KIF13AQ9H1H9 1805 aa27.34■■□□□ 1.97
SERF1A-207ENST00000512649 RANGAP1P46060 587 aaPredicted RBP27.33■■□□□ 1.97
SERF1A-207ENST00000512649 EHMT2Q96KQ7 1210 aa27.29■■□□□ 1.96
SERF1A-207ENST00000512649 ASXL2Q76L83 1435 aa27.28■■□□□ 1.96
SERF1A-207ENST00000512649 DIP2BQ9P265 1576 aa27.27■■□□□ 1.96
SERF1A-207ENST00000512649 PLB1Q6P1J6 1458 aa27.27■■□□□ 1.96
SERF1A-207ENST00000512649 KDM5BQ9UGL1 1544 aa27.25■■□□□ 1.95
SERF1A-207ENST00000512649 KIF21BO75037 1637 aa27.24■■□□□ 1.95
SERF1A-207ENST00000512649 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
SERF1A-207ENST00000512649 ZCCHC11Q5TAX3 1644 aaKnown RBP27.18■■□□□ 1.94
SERF1A-207ENST00000512649 ABCA8O94911 1581 aa27.17■■□□□ 1.94
SERF1A-207ENST00000512649 SAMD9Q5K651 1589 aa27.14■■□□□ 1.94
SERF1A-207ENST00000512649 TSPOAP1O95153 1857 aa27.13■■□□□ 1.93
SERF1A-207ENST00000512649 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
SERF1A-207ENST00000512649 KCNH8Q96L42 1107 aa27.1■■□□□ 1.93
SERF1A-207ENST00000512649 EPRSP07814 1512 aaKnown RBP27.09■■□□□ 1.93
SERF1A-207ENST00000512649 GLI2P10070 1586 aa27.09■■□□□ 1.93
SERF1A-207ENST00000512649 FHOD3Q2V2M9 1422 aa27.07■■□□□ 1.92
SERF1A-207ENST00000512649 WDR7Q9Y4E6 1490 aa27.07■■□□□ 1.92
SERF1A-207ENST00000512649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.07■■□□□ 1.92
SERF1A-207ENST00000512649 HNRNPUL2Q1KMD3 747 aaKnown RBP27.07■■□□□ 1.92
SERF1A-207ENST00000512649 EFCAB5A4FU69 1503 aa27.02■■□□□ 1.92
SERF1A-207ENST00000512649 ATP10BO94823 1461 aa27■■□□□ 1.91
SERF1A-207ENST00000512649 RAPGEF6Q8TEU7 1601 aa26.99■■□□□ 1.91
SERF1A-207ENST00000512649 KDM6BO15054 1643 aa26.97■■□□□ 1.91
SERF1A-207ENST00000512649 TEX14Q8IWB6 1497 aa26.93■■□□□ 1.9
SERF1A-207ENST00000512649 MAP3K4Q9Y6R4 1608 aa26.93■■□□□ 1.9
SERF1A-207ENST00000512649 CD109Q6YHK3 1445 aa26.91■■□□□ 1.9
SERF1A-207ENST00000512649 ATP1B4Q9UN42 357 aaPredicted RBP26.9■■□□□ 1.9
SERF1A-207ENST00000512649 PPRC1Q5VV67 1664 aaKnown RBP26.89■■□□□ 1.9
SERF1A-207ENST00000512649 NUP153P49790 1475 aaKnown RBP26.89■■□□□ 1.9
SERF1A-207ENST00000512649 PLEKHD1A6NEE1 506 aa26.88■■□□□ 1.89
SERF1A-207ENST00000512649 FMN1Q68DA7 1419 aa26.85■■□□□ 1.89
SERF1A-207ENST00000512649 ARHGAP35Q9NRY4 1499 aa26.84■■□□□ 1.89
SERF1A-207ENST00000512649 CFAP43Q8NDM7 1665 aa26.83■■□□□ 1.89
SERF1A-207ENST00000512649 MAGI3Q5TCQ9 1506 aa26.8■■□□□ 1.88
SERF1A-207ENST00000512649 COL17A1Q9UMD9 1497 aaPredicted RBP26.74■■□□□ 1.87
SERF1A-207ENST00000512649 CDK11AQ9UQ88 783 aaPredicted RBP26.72■■□□□ 1.87
SERF1A-207ENST00000512649 ABCA9Q8IUA7 1624 aa26.7■■□□□ 1.86
SERF1A-207ENST00000512649 CDK13Q14004 1512 aaKnown RBP26.69■■□□□ 1.86
SERF1A-207ENST00000512649 HECW1Q76N89 1606 aa26.68■■□□□ 1.86
SERF1A-207ENST00000512649 CLIP1P30622 1438 aa26.65■■□□□ 1.86
SERF1A-207ENST00000512649 PHLDB1Q86UU1 1377 aa26.65■■□□□ 1.86
SERF1A-207ENST00000512649 NEO1Q92859 1461 aa26.58■■□□□ 1.85
SERF1A-207ENST00000512649 ARAP3Q8WWN8 1544 aa26.58■■□□□ 1.85
SERF1A-207ENST00000512649 CASKIN1Q8WXD9 1431 aa26.57■■□□□ 1.84
SERF1A-207ENST00000512649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.56■■□□□ 1.84
SERF1A-207ENST00000512649 KDM4FA0A1W2PPD8 638 aa26.53■■□□□ 1.84
SERF1A-207ENST00000512649 RAPGEF3O95398 923 aa26.53■■□□□ 1.84
SERF1A-207ENST00000512649 CCDC18Q5T9S5 1454 aa26.5■■□□□ 1.83
SERF1A-207ENST00000512649 TROQ12816 1431 aaPredicted RBP26.5■■□□□ 1.83
SERF1A-207ENST00000512649 PCF11O94913 1555 aaKnown RBP26.5■■□□□ 1.83
SERF1A-207ENST00000512649 FANCAO15360 1455 aa26.49■■□□□ 1.83
SERF1A-207ENST00000512649 TTC37Q6PGP7 1564 aa26.49■■□□□ 1.83
SERF1A-207ENST00000512649 AKNAQ7Z591 1439 aa26.48■■□□□ 1.83
SERF1A-207ENST00000512649 LOC105371045A0A1W2PR82 267 aa26.48■■□□□ 1.83
SERF1A-207ENST00000512649 FYCO1Q9BQS8 1478 aa26.47■■□□□ 1.83
SERF1A-207ENST00000512649 PLCH2O75038 1416 aa26.46■■□□□ 1.83
SERF1A-207ENST00000512649 EFCAB2Q5VUJ9 269 aa26.45■■□□□ 1.82
SERF1A-207ENST00000512649 CEP162Q5TB80 1403 aa26.45■■□□□ 1.82
SERF1A-207ENST00000512649 CFAP74Q9C0B2 1584 aa26.45■■□□□ 1.82
SERF1A-207ENST00000512649 KIF14Q15058 1648 aa26.43■■□□□ 1.82
SERF1A-207ENST00000512649 LRRIQ1Q96JM4 1722 aa26.43■■□□□ 1.82
SERF1A-207ENST00000512649 DENND4BO75064 1496 aaPredicted RBP26.42■■□□□ 1.82
SERF1A-207ENST00000512649 ADGRL1O94910 1474 aa26.41■■□□□ 1.82
SERF1A-207ENST00000512649 MYO5CQ9NQX4 1742 aa26.36■■□□□ 1.81
SERF1A-207ENST00000512649 SCAPERQ9BY12 1400 aa26.34■■□□□ 1.81
SERF1A-207ENST00000512649 ARHGAP5Q13017 1502 aa26.33■■□□□ 1.81
SERF1A-207ENST00000512649 ARID4BQ4LE39 1312 aaPredicted RBP26.32■■□□□ 1.8
SERF1A-207ENST00000512649 FRMPD1Q5SYB0 1578 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms