RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 SUPT16HQ9Y5B9 1047 aaKnown RBP15.18■□□□□ 0.02
PDCD6-209ENST00000512466 MRC2Q9UBG0 1479 aa15.18■□□□□ 0.02
PDCD6-209ENST00000512466 KANK4Q5T7N3 995 aaPredicted RBP15.17■□□□□ 0.02
PDCD6-209ENST00000512466 POLR3GLQ9BT43 218 aa15.17■□□□□ 0.02
PDCD6-209ENST00000512466 GOLGA3Q08378 1498 aa15.17■□□□□ 0.02
PDCD6-209ENST00000512466 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
PDCD6-209ENST00000512466 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
PDCD6-209ENST00000512466 IRX6P78412 446 aaPredicted RBP15.13■□□□□ 0.01
PDCD6-209ENST00000512466 SIN3AQ96ST3 1273 aa15.12■□□□□ 0.01
PDCD6-209ENST00000512466 URB2Q14146 1524 aaKnown RBP15.12■□□□□ 0.01
PDCD6-209ENST00000512466 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
PDCD6-209ENST00000512466 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
PDCD6-209ENST00000512466 ARID3CA6NKF2 412 aa15.09■□□□□ 0.01
PDCD6-209ENST00000512466 ANP32EQ9BTT0 268 aa15.08■□□□□ 0.01
PDCD6-209ENST00000512466 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
PDCD6-209ENST00000512466 ANP32CO43423 234 aa15.07■□□□□ 0
PDCD6-209ENST00000512466 PRDM2Q13029 1718 aa15.07■□□□□ 0
PDCD6-209ENST00000512466 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
PDCD6-209ENST00000512466 BIVM-ERCC5R4GMW8 1640 aa15.05■□□□□ 0
PDCD6-209ENST00000512466 SENP3-EIF4A1A0A087X0R7 540 aa15.05■□□□□ -0
PDCD6-209ENST00000512466 IGF1RP08069 1367 aa15.04■□□□□ -0
PDCD6-209ENST00000512466 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.011e-9■■■■■ 27.5
PDCD6-209ENST00000512466 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
PDCD6-209ENST00000512466 IFT140Q96RY7 1462 aa14.99□□□□□ -0.01
PDCD6-209ENST00000512466 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
PDCD6-209ENST00000512466 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
PDCD6-209ENST00000512466 HNRNPUQ00839 825 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDCD6-209ENST00000512466 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
PDCD6-209ENST00000512466 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
PDCD6-209ENST00000512466 CHIC2Q9UKJ5 165 aa14.93□□□□□ -0.02
PDCD6-209ENST00000512466 ZNF326Q5BKZ1 582 aaKnown RBP14.91□□□□□ -0.02
PDCD6-209ENST00000512466 DHX57Q6P158 1386 aaKnown RBP14.91□□□□□ -0.02
PDCD6-209ENST00000512466 WDR62O43379 1518 aa14.9□□□□□ -0.02
PDCD6-209ENST00000512466 GRIN2BQ13224 1484 aa14.9□□□□□ -0.02
PDCD6-209ENST00000512466 FAM9BQ8IZU0 186 aa14.89□□□□□ -0.03
PDCD6-209ENST00000512466 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
PDCD6-209ENST00000512466 PRXQ9BXM0 1461 aa14.87□□□□□ -0.03
PDCD6-209ENST00000512466 CDK11AQ9UQ88 783 aaPredicted RBP14.86□□□□□ -0.03
PDCD6-209ENST00000512466 CCNB3Q8WWL7 1395 aa14.85□□□□□ -0.03
PDCD6-209ENST00000512466 TONSLQ96HA7 1378 aa14.85□□□□□ -0.03
PDCD6-209ENST00000512466 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.03
PDCD6-209ENST00000512466 KIF21BO75037 1637 aa14.82□□□□□ -0.04
PDCD6-209ENST00000512466 RAB3GAP2Q9H2M9 1393 aa14.81□□□□□ -0.04
PDCD6-209ENST00000512466 CLSPNQ9HAW4 1339 aa14.81□□□□□ -0.04
PDCD6-209ENST00000512466 RRP7BPQ9NSQ0 103 aa14.81□□□□□ -0.04
PDCD6-209ENST00000512466 RBM19Q9Y4C8 960 aaKnown RBP14.8□□□□□ -0.04
PDCD6-209ENST00000512466 ERICH3Q5RHP9 1530 aa14.8□□□□□ -0.04
PDCD6-209ENST00000512466 SNAPC4Q5SXM2 1469 aa14.79□□□□□ -0.04
PDCD6-209ENST00000512466 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
PDCD6-209ENST00000512466 SALL2Q9Y467 1007 aaPredicted RBP14.76□□□□□ -0.05
PDCD6-209ENST00000512466 TARBP1Q13395 1621 aaKnown RBP14.75□□□□□ -0.05
PDCD6-209ENST00000512466 NBR1Q14596 966 aa14.74□□□□□ -0.05
PDCD6-209ENST00000512466 JPH4Q96JJ6 628 aa14.73□□□□□ -0.05
PDCD6-209ENST00000512466 CUL7Q14999 1698 aa14.72□□□□□ -0.05
PDCD6-209ENST00000512466 MAGI1Q96QZ7 1491 aaPredicted RBP14.7□□□□□ -0.06
PDCD6-209ENST00000512466 PRKCSHP14314 528 aaPredicted RBP14.7□□□□□ -0.06
PDCD6-209ENST00000512466 FOXD1Q16676 465 aa14.7□□□□□ -0.06
PDCD6-209ENST00000512466 MRS2Q9HD23 443 aa14.7□□□□□ -0.06
PDCD6-209ENST00000512466 B4GALNT3Q6L9W6 998 aa14.69□□□□□ -0.06
PDCD6-209ENST00000512466 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
PDCD6-209ENST00000512466 EIF4G3O43432 1585 aaKnown RBP14.68□□□□□ -0.06
PDCD6-209ENST00000512466 SYNJ2O15056 1496 aa14.68□□□□□ -0.06
PDCD6-209ENST00000512466 NPM2Q86SE8 214 aaKnown RBP14.68□□□□□ -0.06
PDCD6-209ENST00000512466 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
PDCD6-209ENST00000512466 ZNF777Q9ULD5 760 aaPredicted RBP14.65□□□□□ -0.06
PDCD6-209ENST00000512466 MTUS2Q5JR59 1369 aa14.65□□□□□ -0.06
PDCD6-209ENST00000512466 FHOD3Q2V2M9 1422 aa14.65□□□□□ -0.06
PDCD6-209ENST00000512466 CARMIL2Q6F5E8 1435 aa14.65□□□□□ -0.06
PDCD6-209ENST00000512466 SETD5Q9C0A6 1442 aa14.65□□□□□ -0.06
PDCD6-209ENST00000512466 PPP1R15AO75807 674 aaPredicted RBP14.65□□□□□ -0.06
PDCD6-209ENST00000512466 GRIN2AQ12879 1464 aa14.64□□□□□ -0.07
PDCD6-209ENST00000512466 ARAP1Q96P48 1450 aa14.62□□□□□ -0.07
PDCD6-209ENST00000512466 WDR97A6NE52 1622 aa14.6□□□□□ -0.07
PDCD6-209ENST00000512466 KIAA0586Q9BVV6 1533 aa14.6□□□□□ -0.07
PDCD6-209ENST00000512466 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
PDCD6-209ENST00000512466 FMN1Q68DA7 1419 aa14.6□□□□□ -0.07
PDCD6-209ENST00000512466 ADAMTS12P58397 1594 aa14.59□□□□□ -0.07
PDCD6-209ENST00000512466 ARHGAP35Q9NRY4 1499 aa14.59□□□□□ -0.07
PDCD6-209ENST00000512466 RTN4Q9NQC3 1192 aaKnown RBP14.59□□□□□ -0.07
PDCD6-209ENST00000512466 EIF4G2P78344 907 aaKnown RBP eCLIP14.58□□□□□ -0.07
PDCD6-209ENST00000512466 RTL5Q5HYW3 569 aaPredicted RBP14.57□□□□□ -0.08
PDCD6-209ENST00000512466 HSPA5P11021 654 aaKnown RBP14.57□□□□□ -0.08
PDCD6-209ENST00000512466 EIF5BO60841 1220 aaKnown RBP14.55□□□□□ -0.08
PDCD6-209ENST00000512466 KDM2AQ9Y2K7 1162 aa14.55□□□□□ -0.08
PDCD6-209ENST00000512466 CCDC136Q96JN2 1154 aa14.54□□□□□ -0.08
PDCD6-209ENST00000512466 PHLDB1Q86UU1 1377 aa14.54□□□□□ -0.08
PDCD6-209ENST00000512466 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
PDCD6-209ENST00000512466 IQGAP2Q13576 1575 aa14.54□□□□□ -0.08
PDCD6-209ENST00000512466 CCER2I3L3R5 266 aa14.52□□□□□ -0.08
PDCD6-209ENST00000512466 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.09
PDCD6-209ENST00000512466 PTPRGP23470 1445 aa14.51□□□□□ -0.09
PDCD6-209ENST00000512466 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
PDCD6-209ENST00000512466 EFCAB5A4FU69 1503 aa14.51□□□□□ -0.09
PDCD6-209ENST00000512466 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
PDCD6-209ENST00000512466 CCDC184Q52MB2 194 aa14.48□□□□□ -0.09
PDCD6-209ENST00000512466 DEKP35659 375 aaKnown RBP14.48□□□□□ -0.09
PDCD6-209ENST00000512466 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
PDCD6-209ENST00000512466 ANP32AP39687 249 aaKnown RBP14.47□□□□□ -0.09
PDCD6-209ENST00000512466 NUP160Q12769 1436 aa14.46□□□□□ -0.09
PDCD6-209ENST00000512466 PPP4R2Q9NY27 417 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms