RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
SMN2-210ENST00000511812 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
SMN2-210ENST00000511812 KIAA0586Q9BVV6 1533 aa28.51■■■□□ 2.15
SMN2-210ENST00000511812 RAPGEF2Q9Y4G8 1499 aa28.44■■■□□ 2.14
SMN2-210ENST00000511812 TRHP20396 242 aaPredicted RBP28.41■■■□□ 2.14
SMN2-210ENST00000511812 IQGAP2Q13576 1575 aa28.3■■■□□ 2.12
SMN2-210ENST00000511812 CARMIL2Q6F5E8 1435 aa28.27■■■□□ 2.12
SMN2-210ENST00000511812 CSRNP3Q8WYN3 585 aa28.24■■■□□ 2.11
SMN2-210ENST00000511812 PRXQ9BXM0 1461 aa28.23■■■□□ 2.11
SMN2-210ENST00000511812 EEA1Q15075 1411 aa28.21■■■□□ 2.11
SMN2-210ENST00000511812 TTBK1Q5TCY1 1321 aaPredicted RBP28.18■■■□□ 2.1
SMN2-210ENST00000511812 PTPRGP23470 1445 aa28.18■■■□□ 2.1
SMN2-210ENST00000511812 NPM1P06748 294 aaKnown RBP eCLIP28.18■■■□□ 2.1
SMN2-210ENST00000511812 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
SMN2-210ENST00000511812 TNIKQ9UKE5 1360 aa28.17■■■□□ 2.1
SMN2-210ENST00000511812 FAM9AQ8IZU1 332 aaPredicted RBP28.13■■■□□ 2.09
SMN2-210ENST00000511812 UGGT2Q9NYU1 1516 aa28.13■■■□□ 2.09
SMN2-210ENST00000511812 CTTNBP2Q8WZ74 1663 aa28.11■■■□□ 2.09
SMN2-210ENST00000511812 DISP1Q96F81 1524 aa28.09■■■□□ 2.09
SMN2-210ENST00000511812 ADCY10Q96PN6 1610 aa28.05■■■□□ 2.08
SMN2-210ENST00000511812 GOLGA3Q08378 1498 aa28.02■■■□□ 2.08
SMN2-210ENST00000511812 KIAA0556O60303 1618 aa28.02■■■□□ 2.08
SMN2-210ENST00000511812 UACAQ9BZF9 1416 aa27.96■■■□□ 2.07
SMN2-210ENST00000511812 MAPKBP1O60336 1514 aa27.94■■■□□ 2.06
SMN2-210ENST00000511812 UHRF1BP1LA0JNW5 1464 aa27.92■■■□□ 2.06
SMN2-210ENST00000511812 ABCC2Q92887 1545 aa27.92■■■□□ 2.06
SMN2-210ENST00000511812 FAM69CQ0P6D2 419 aa27.89■■■□□ 2.06
SMN2-210ENST00000511812 KIF21BO75037 1637 aa27.87■■■□□ 2.05
SMN2-210ENST00000511812 ABCC10Q5T3U5 1492 aa27.87■■■□□ 2.05
SMN2-210ENST00000511812 P3H3Q8IVL6 736 aa27.84■■■□□ 2.05
SMN2-210ENST00000511812 RANGAP1P46060 587 aaPredicted RBP27.82■■■□□ 2.04
SMN2-210ENST00000511812 KIF13AQ9H1H9 1805 aa27.82■■■□□ 2.04
SMN2-210ENST00000511812 EHMT2Q96KQ7 1210 aa27.8■■■□□ 2.04
SMN2-210ENST00000511812 KDM5BQ9UGL1 1544 aa27.78■■■□□ 2.04
SMN2-210ENST00000511812 PLB1Q6P1J6 1458 aa27.78■■■□□ 2.04
SMN2-210ENST00000511812 UBTFP17480 764 aaKnown RBP27.78■■■□□ 2.04
SMN2-210ENST00000511812 DIP2BQ9P265 1576 aa27.77■■■□□ 2.04
SMN2-210ENST00000511812 ASXL2Q76L83 1435 aa27.76■■■□□ 2.04
SMN2-210ENST00000511812 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
SMN2-210ENST00000511812 ABCA8O94911 1581 aa27.72■■■□□ 2.03
SMN2-210ENST00000511812 ZCCHC11Q5TAX3 1644 aaKnown RBP27.7■■■□□ 2.02
SMN2-210ENST00000511812 FHOD3Q2V2M9 1422 aa27.63■■■□□ 2.01
SMN2-210ENST00000511812 EFCAB5A4FU69 1503 aa27.62■■■□□ 2.01
SMN2-210ENST00000511812 ARID3CA6NKF2 412 aa27.6■■■□□ 2.01
SMN2-210ENST00000511812 GLI2P10070 1586 aa27.6■■■□□ 2.01
SMN2-210ENST00000511812 WDR7Q9Y4E6 1490 aa27.59■■■□□ 2.01
SMN2-210ENST00000511812 EPRSP07814 1512 aaKnown RBP27.59■■■□□ 2.01
SMN2-210ENST00000511812 TSPOAP1O95153 1857 aa27.57■■■□□ 2
SMN2-210ENST00000511812 RAPGEF6Q8TEU7 1601 aa27.56■■■□□ 2
SMN2-210ENST00000511812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.54■■■□□ 2
SMN2-210ENST00000511812 HNRNPUL2Q1KMD3 747 aaKnown RBP27.54■■■□□ 2
SMN2-210ENST00000511812 KCNH8Q96L42 1107 aa27.53■■■□□ 2
SMN2-210ENST00000511812 ATP10BO94823 1461 aa27.52■■■□□ 2
SMN2-210ENST00000511812 NUP153P49790 1475 aaKnown RBP27.44■■□□□ 1.98
SMN2-210ENST00000511812 KDM6BO15054 1643 aa27.44■■□□□ 1.98
SMN2-210ENST00000511812 MAP3K4Q9Y6R4 1608 aa27.44■■□□□ 1.98
SMN2-210ENST00000511812 ARHGAP35Q9NRY4 1499 aa27.44■■□□□ 1.98
SMN2-210ENST00000511812 TEX14Q8IWB6 1497 aa27.43■■□□□ 1.98
SMN2-210ENST00000511812 FMN1Q68DA7 1419 aa27.41■■□□□ 1.98
SMN2-210ENST00000511812 CD109Q6YHK3 1445 aa27.39■■□□□ 1.97
SMN2-210ENST00000511812 PPRC1Q5VV67 1664 aaKnown RBP27.39■■□□□ 1.97
SMN2-210ENST00000511812 ATP1B4Q9UN42 357 aaPredicted RBP27.38■■□□□ 1.97
SMN2-210ENST00000511812 PLEKHD1A6NEE1 506 aa27.36■■□□□ 1.97
SMN2-210ENST00000511812 CFAP43Q8NDM7 1665 aa27.35■■□□□ 1.97
SMN2-210ENST00000511812 MAGI3Q5TCQ9 1506 aa27.31■■□□□ 1.96
SMN2-210ENST00000511812 HECW1Q76N89 1606 aa27.27■■□□□ 1.96
SMN2-210ENST00000511812 CLIP1P30622 1438 aa27.25■■□□□ 1.95
SMN2-210ENST00000511812 ABCA9Q8IUA7 1624 aa27.23■■□□□ 1.95
SMN2-210ENST00000511812 CDK13Q14004 1512 aaKnown RBP27.23■■□□□ 1.95
SMN2-210ENST00000511812 CDK11AQ9UQ88 783 aaPredicted RBP27.23■■□□□ 1.95
SMN2-210ENST00000511812 COL17A1Q9UMD9 1497 aaPredicted RBP27.2■■□□□ 1.95
SMN2-210ENST00000511812 AEBP2Q6ZN18 517 aaPredicted RBP27.17■■□□□ 1.94
SMN2-210ENST00000511812 CASKIN1Q8WXD9 1431 aa27.15■■□□□ 1.94
SMN2-210ENST00000511812 PHLDB1Q86UU1 1377 aa27.14■■□□□ 1.94
SMN2-210ENST00000511812 PCF11O94913 1555 aaKnown RBP27.09■■□□□ 1.93
SMN2-210ENST00000511812 NEO1Q92859 1461 aa27.09■■□□□ 1.93
SMN2-210ENST00000511812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.09■■□□□ 1.93
SMN2-210ENST00000511812 CCDC18Q5T9S5 1454 aa27.08■■□□□ 1.93
SMN2-210ENST00000511812 ARAP3Q8WWN8 1544 aa27.07■■□□□ 1.92
SMN2-210ENST00000511812 CEP162Q5TB80 1403 aa27.06■■□□□ 1.92
SMN2-210ENST00000511812 FYCO1Q9BQS8 1478 aa27.06■■□□□ 1.92
SMN2-210ENST00000511812 TROQ12816 1431 aaPredicted RBP27.05■■□□□ 1.92
SMN2-210ENST00000511812 LOC105371045A0A1W2PR82 267 aa27.04■■□□□ 1.92
SMN2-210ENST00000511812 TTC37Q6PGP7 1564 aa27.03■■□□□ 1.92
SMN2-210ENST00000511812 LRRIQ1Q96JM4 1722 aa27.01■■□□□ 1.91
SMN2-210ENST00000511812 FANCAO15360 1455 aa27■■□□□ 1.91
SMN2-210ENST00000511812 KIF14Q15058 1648 aa27■■□□□ 1.91
SMN2-210ENST00000511812 AKNAQ7Z591 1439 aa26.98■■□□□ 1.91
SMN2-210ENST00000511812 CFAP74Q9C0B2 1584 aa26.97■■□□□ 1.91
SMN2-210ENST00000511812 RAPGEF3O95398 923 aa26.97■■□□□ 1.91
SMN2-210ENST00000511812 PLCH2O75038 1416 aa26.97■■□□□ 1.91
SMN2-210ENST00000511812 EFCAB2Q5VUJ9 269 aa26.93■■□□□ 1.9
SMN2-210ENST00000511812 DENND4BO75064 1496 aaPredicted RBP26.93■■□□□ 1.9
SMN2-210ENST00000511812 KDM4FA0A1W2PPD8 638 aa26.9■■□□□ 1.9
SMN2-210ENST00000511812 MYO5CQ9NQX4 1742 aa26.9■■□□□ 1.9
SMN2-210ENST00000511812 ADGRL1O94910 1474 aa26.86■■□□□ 1.89
SMN2-210ENST00000511812 ARHGAP5Q13017 1502 aa26.85■■□□□ 1.89
SMN2-210ENST00000511812 SCAPERQ9BY12 1400 aa26.83■■□□□ 1.89
SMN2-210ENST00000511812 MTUS2Q5JR59 1369 aa26.83■■□□□ 1.88
SMN2-210ENST00000511812 FRMPD1Q5SYB0 1578 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms