RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
SMN2-210ENST00000511812 CCDC180Q9P1Z9 1646 aa36.58■■■■□ 3.45
SMN2-210ENST00000511812 ABCC9O60706 1549 aa36.07■■■■□ 3.36
SMN2-210ENST00000511812 RB1CC1Q8TDY2 1594 aa34.59■■■■□ 3.13
SMN2-210ENST00000511812 DCAF8L2P0C7V8 631 aa34.58■■■■□ 3.13
SMN2-210ENST00000511812 NACADO15069 1562 aa34.49■■■■□ 3.11
SMN2-210ENST00000511812 MYO15BQ96JP2 1530 aa34.18■■■■□ 3.06
SMN2-210ENST00000511812 ZCCHC6Q5VYS8 1495 aaKnown RBP34.15■■■■□ 3.06
SMN2-210ENST00000511812 DCAF1Q9Y4B6 1507 aa33.95■■■■□ 3.03
SMN2-210ENST00000511812 PABPN1Q86U42 306 aaKnown RBP eCLIP33.7■■■□□ 2.99
SMN2-210ENST00000511812 UNC13AQ9UPW8 1703 aa33.69■■■□□ 2.98
SMN2-210ENST00000511812 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
SMN2-210ENST00000511812 SCRIBQ14160 1630 aa33.4■■■□□ 2.94
SMN2-210ENST00000511812 DNAJC5BQ9UF47 199 aa33.25■■■□□ 2.91
SMN2-210ENST00000511812 SHROOM4Q9ULL8 1493 aa33.16■■■□□ 2.9
SMN2-210ENST00000511812 EIF4G1Q04637 1599 aaKnown RBP32.66■■■□□ 2.82
SMN2-210ENST00000511812 CC2D2AQ9P2K1 1620 aa32.58■■■□□ 2.81
SMN2-210ENST00000511812 CECR2Q9BXF3 1484 aa32.43■■■□□ 2.78
SMN2-210ENST00000511812 SMARCA4P51532 1647 aa31.9■■■□□ 2.7
SMN2-210ENST00000511812 BAZ1AQ9NRL2 1556 aaPredicted RBP31.87■■■□□ 2.69
SMN2-210ENST00000511812 NCAPD3P42695 1498 aa31.82■■■□□ 2.68
SMN2-210ENST00000511812 ATAD2BQ9ULI0 1458 aa31.81■■■□□ 2.68
SMN2-210ENST00000511812 SMARCA2P51531 1590 aa31.78■■■□□ 2.68
SMN2-210ENST00000511812 MROH2BQ7Z745 1585 aa31.64■■■□□ 2.65
SMN2-210ENST00000511812 HMGXB3Q12766 1538 aa31.63■■■□□ 2.65
SMN2-210ENST00000511812 BAZ1BQ9UIG0 1483 aaKnown RBP31.57■■■□□ 2.64
SMN2-210ENST00000511812 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
SMN2-210ENST00000511812 WIZO95785 1651 aa31.28■■■□□ 2.6
SMN2-210ENST00000511812 RSF1Q96T23 1441 aaPredicted RBP31.23■■■□□ 2.59
SMN2-210ENST00000511812 ERCC6Q03468 1493 aa31.16■■■□□ 2.58
SMN2-210ENST00000511812 NESP48681 1621 aa31.11■■■□□ 2.57
SMN2-210ENST00000511812 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.56
SMN2-210ENST00000511812 TOP2AP11388 1531 aaKnown RBP30.96■■■□□ 2.55
SMN2-210ENST00000511812 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
SMN2-210ENST00000511812 PDS5BQ9NTI5 1447 aa30.88■■■□□ 2.53
SMN2-210ENST00000511812 CUX2O14529 1486 aa30.85■■■□□ 2.53
SMN2-210ENST00000511812 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
SMN2-210ENST00000511812 CFTRP13569 1480 aa30.65■■■□□ 2.5
SMN2-210ENST00000511812 THOC2Q8NI27 1593 aaKnown RBP30.65■■■□□ 2.5
SMN2-210ENST00000511812 CCDC88BA6NC98 1476 aa30.61■■■□□ 2.49
SMN2-210ENST00000511812 FANCD2Q9BXW9 1451 aa30.56■■■□□ 2.48
SMN2-210ENST00000511812 CEP164Q9UPV0 1460 aa30.55■■■□□ 2.48
SMN2-210ENST00000511812 MRC2Q9UBG0 1479 aa30.54■■■□□ 2.48
SMN2-210ENST00000511812 WDR62O43379 1518 aa30.4■■■□□ 2.46
SMN2-210ENST00000511812 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
SMN2-210ENST00000511812 PRDM2Q13029 1718 aa30.35■■■□□ 2.45
SMN2-210ENST00000511812 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
SMN2-210ENST00000511812 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
SMN2-210ENST00000511812 ABCC8Q09428 1581 aa30.06■■■□□ 2.4
SMN2-210ENST00000511812 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
SMN2-210ENST00000511812 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
SMN2-210ENST00000511812 IFT140Q96RY7 1462 aa29.92■■■□□ 2.38
SMN2-210ENST00000511812 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
SMN2-210ENST00000511812 POLA1P09884 1462 aaPredicted RBP29.75■■■□□ 2.35
SMN2-210ENST00000511812 CUX1P39880 1505 aa29.7■■■□□ 2.34
SMN2-210ENST00000511812 SOGA1O94964 1423 aa29.68■■■□□ 2.34
SMN2-210ENST00000511812 FGD5Q6ZNL6 1462 aa29.67■■■□□ 2.34
SMN2-210ENST00000511812 TARBP1Q13395 1621 aaKnown RBP29.66■■■□□ 2.34
SMN2-210ENST00000511812 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
SMN2-210ENST00000511812 EIF4G3O43432 1585 aaKnown RBP29.62■■■□□ 2.33
SMN2-210ENST00000511812 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
SMN2-210ENST00000511812 AQRO60306 1485 aaKnown RBP eCLIP29.6■■■□□ 2.33
SMN2-210ENST00000511812 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
SMN2-210ENST00000511812 WRNQ14191 1432 aaPredicted RBP eCLIP29.49■■■□□ 2.31
SMN2-210ENST00000511812 WDR97A6NE52 1622 aa29.45■■■□□ 2.31
SMN2-210ENST00000511812 TOP2BQ02880 1626 aa29.39■■■□□ 2.3
SMN2-210ENST00000511812 FBLN2P98095 1184 aa29.39■■■□□ 2.3
SMN2-210ENST00000511812 BIVM-ERCC5R4GMW8 1640 aa29.37■■■□□ 2.29
SMN2-210ENST00000511812 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
SMN2-210ENST00000511812 SYNJ1O43426 1573 aa29.35■■■□□ 2.29
SMN2-210ENST00000511812 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
SMN2-210ENST00000511812 GAPVD1Q14C86 1478 aa29.32■■■□□ 2.28
SMN2-210ENST00000511812 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
SMN2-210ENST00000511812 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
SMN2-210ENST00000511812 CHD1O14646 1710 aa29.27■■■□□ 2.28
SMN2-210ENST00000511812 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
SMN2-210ENST00000511812 ABCA5Q8WWZ7 1642 aa29.22■■■□□ 2.27
SMN2-210ENST00000511812 PBRM1Q86U86 1689 aa29.2■■■□□ 2.26
SMN2-210ENST00000511812 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
SMN2-210ENST00000511812 TRIM41Q8WV44 630 aa29.16■■■□□ 2.26
SMN2-210ENST00000511812 RIMBP3CA6NJZ7 1639 aa29.05■■■□□ 2.24
SMN2-210ENST00000511812 RIMBP3BA6NNM3 1639 aa29.05■■■□□ 2.24
SMN2-210ENST00000511812 RIMBP3Q9UFD9 1639 aa29.05■■■□□ 2.24
SMN2-210ENST00000511812 ARHGEF11O15085 1522 aa29.04■■■□□ 2.24
SMN2-210ENST00000511812 ERICH3Q5RHP9 1530 aa29■■■□□ 2.23
SMN2-210ENST00000511812 ADAMTS12P58397 1594 aa28.97■■■□□ 2.23
SMN2-210ENST00000511812 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
SMN2-210ENST00000511812 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.23
SMN2-210ENST00000511812 GRIN2AQ12879 1464 aa28.94■■■□□ 2.22
SMN2-210ENST00000511812 KIF27Q86VH2 1401 aa28.92■■■□□ 2.22
SMN2-210ENST00000511812 CYB5RLQ6IPT4 315 aa28.87■■■□□ 2.21
SMN2-210ENST00000511812 NUP160Q12769 1436 aa28.81■■■□□ 2.2
SMN2-210ENST00000511812 IGF1RP08069 1367 aa28.78■■■□□ 2.2
SMN2-210ENST00000511812 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
SMN2-210ENST00000511812 CEP170Q5SW79 1584 aa28.77■■■□□ 2.2
SMN2-210ENST00000511812 CUL7Q14999 1698 aa28.7■■■□□ 2.18
SMN2-210ENST00000511812 CARMIL1Q5VZK9 1371 aa28.64■■■□□ 2.18
SMN2-210ENST00000511812 JPH4Q96JJ6 628 aa28.58■■■□□ 2.17
SMN2-210ENST00000511812 SHROOM2Q13796 1616 aa28.57■■■□□ 2.16
SMN2-210ENST00000511812 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms