RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 FAM69CQ0P6D2 419 aa23.49■■□□□ 1.35
CLDND1-224ENST00000511667 ABCC10Q5T3U5 1492 aa23.48■■□□□ 1.35
CLDND1-224ENST00000511667 IGF1RP08069 1367 aa23.47■■□□□ 1.35
CLDND1-224ENST00000511667 KIF27Q86VH2 1401 aa23.45■■□□□ 1.34
CLDND1-224ENST00000511667 KDM6BO15054 1643 aa23.43■■□□□ 1.34
CLDND1-224ENST00000511667 NPM1P06748 294 aaKnown RBP eCLIP23.38■■□□□ 1.33
CLDND1-224ENST00000511667 CUL7Q14999 1698 aa23.37■■□□□ 1.33
CLDND1-224ENST00000511667 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
CLDND1-224ENST00000511667 DIP2BQ9P265 1576 aa23.36■■□□□ 1.33
CLDND1-224ENST00000511667 PRG4Q92954 1404 aaPredicted RBP23.35■■□□□ 1.33
CLDND1-224ENST00000511667 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.33
CLDND1-224ENST00000511667 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
CLDND1-224ENST00000511667 KIAA0586Q9BVV6 1533 aa23.26■■□□□ 1.31
CLDND1-224ENST00000511667 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
CLDND1-224ENST00000511667 TSPOAP1O95153 1857 aa23.24■■□□□ 1.31
CLDND1-224ENST00000511667 ADCY10Q96PN6 1610 aa23.19■■□□□ 1.3
CLDND1-224ENST00000511667 ADGRL1O94910 1474 aa23.19■■□□□ 1.3
CLDND1-224ENST00000511667 HECW2Q9P2P5 1572 aa23.17■■□□□ 1.3
CLDND1-224ENST00000511667 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
CLDND1-224ENST00000511667 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
CLDND1-224ENST00000511667 FBXO41Q8TF61 875 aa23.03■■□□□ 1.28
CLDND1-224ENST00000511667 PRXQ9BXM0 1461 aa23.03■■□□□ 1.28
CLDND1-224ENST00000511667 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
CLDND1-224ENST00000511667 DISP1Q96F81 1524 aa22.97■■□□□ 1.27
CLDND1-224ENST00000511667 PPRC1Q5VV67 1664 aaKnown RBP22.96■■□□□ 1.27
CLDND1-224ENST00000511667 GLI2P10070 1586 aa22.93■■□□□ 1.26
CLDND1-224ENST00000511667 CARMIL2Q6F5E8 1435 aa22.92■■□□□ 1.26
CLDND1-224ENST00000511667 TNIKQ9UKE5 1360 aa22.91■■□□□ 1.26
CLDND1-224ENST00000511667 PLB1Q6P1J6 1458 aa22.91■■□□□ 1.26
CLDND1-224ENST00000511667 PTPRGP23470 1445 aa22.91■■□□□ 1.26
CLDND1-224ENST00000511667 ASXL2Q76L83 1435 aa22.89■■□□□ 1.25
CLDND1-224ENST00000511667 ABCC2Q92887 1545 aa22.88■■□□□ 1.25
CLDND1-224ENST00000511667 COL17A1Q9UMD9 1497 aaPredicted RBP22.87■■□□□ 1.25
CLDND1-224ENST00000511667 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
CLDND1-224ENST00000511667 UHRF1BP1LA0JNW5 1464 aa22.85■■□□□ 1.25
CLDND1-224ENST00000511667 EEA1Q15075 1411 aa22.84■■□□□ 1.25
CLDND1-224ENST00000511667 KIAA0556O60303 1618 aa22.84■■□□□ 1.25
CLDND1-224ENST00000511667 TEX14Q8IWB6 1497 aa22.82■■□□□ 1.24
CLDND1-224ENST00000511667 CSRNP3Q8WYN3 585 aa22.82■■□□□ 1.24
CLDND1-224ENST00000511667 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
CLDND1-224ENST00000511667 UACAQ9BZF9 1416 aa22.77■■□□□ 1.24
CLDND1-224ENST00000511667 MAP3K4Q9Y6R4 1608 aa22.77■■□□□ 1.24
CLDND1-224ENST00000511667 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
CLDND1-224ENST00000511667 GOLGA3Q08378 1498 aa22.73■■□□□ 1.23
CLDND1-224ENST00000511667 KDM5BQ9UGL1 1544 aa22.73■■□□□ 1.23
CLDND1-224ENST00000511667 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
CLDND1-224ENST00000511667 LMTK3Q96Q04 1460 aa22.7■■□□□ 1.22
CLDND1-224ENST00000511667 ABCA8O94911 1581 aa22.65■■□□□ 1.22
CLDND1-224ENST00000511667 KIF21BO75037 1637 aa22.64■■□□□ 1.22
CLDND1-224ENST00000511667 SAMD9Q5K651 1589 aa22.64■■□□□ 1.22
CLDND1-224ENST00000511667 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
CLDND1-224ENST00000511667 WDR7Q9Y4E6 1490 aa22.52■■□□□ 1.2
CLDND1-224ENST00000511667 MAGI3Q5TCQ9 1506 aa22.51■■□□□ 1.19
CLDND1-224ENST00000511667 FAM9AQ8IZU1 332 aaPredicted RBP22.5■■□□□ 1.19
CLDND1-224ENST00000511667 PTPRMP28827 1452 aa22.49■■□□□ 1.19
CLDND1-224ENST00000511667 CD109Q6YHK3 1445 aa22.48■■□□□ 1.19
CLDND1-224ENST00000511667 SOCS7O14512 581 aa22.48■■□□□ 1.19
CLDND1-224ENST00000511667 CFAP43Q8NDM7 1665 aa22.46■■□□□ 1.19
CLDND1-224ENST00000511667 PCF11O94913 1555 aaKnown RBP22.45■■□□□ 1.18
CLDND1-224ENST00000511667 EFCAB5A4FU69 1503 aa22.44■■□□□ 1.18
CLDND1-224ENST00000511667 ATP10BO94823 1461 aa22.44■■□□□ 1.18
CLDND1-224ENST00000511667 P3H3Q8IVL6 736 aa22.43■■□□□ 1.18
CLDND1-224ENST00000511667 ADAMTSL3P82987 1691 aa22.42■■□□□ 1.18
CLDND1-224ENST00000511667 RAPGEF6Q8TEU7 1601 aa22.41■■□□□ 1.18
CLDND1-224ENST00000511667 DISP3Q9P2K9 1392 aa22.39■■□□□ 1.18
CLDND1-224ENST00000511667 ILDR2Q71H61 639 aa22.39■■□□□ 1.17
CLDND1-224ENST00000511667 FHOD3Q2V2M9 1422 aa22.39■■□□□ 1.17
CLDND1-224ENST00000511667 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
CLDND1-224ENST00000511667 ARAP3Q8WWN8 1544 aa22.36■■□□□ 1.17
CLDND1-224ENST00000511667 KCNH8Q96L42 1107 aa22.36■■□□□ 1.17
CLDND1-224ENST00000511667 CERKQ8TCT0 537 aa22.33■■□□□ 1.17
CLDND1-224ENST00000511667 ARHGAP35Q9NRY4 1499 aa22.3■■□□□ 1.16
CLDND1-224ENST00000511667 BCORL1Q5H9F3 1711 aa22.28■■□□□ 1.16
CLDND1-224ENST00000511667 ABCA9Q8IUA7 1624 aa22.28■■□□□ 1.16
CLDND1-224ENST00000511667 MADDQ8WXG6 1647 aa22.28■■□□□ 1.16
CLDND1-224ENST00000511667 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
CLDND1-224ENST00000511667 PHLDB1Q86UU1 1377 aa22.25■■□□□ 1.15
CLDND1-224ENST00000511667 ARID4BQ4LE39 1312 aaPredicted RBP22.24■■□□□ 1.15
CLDND1-224ENST00000511667 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
CLDND1-224ENST00000511667 HSPA2P54652 639 aa22.23■■□□□ 1.15
CLDND1-224ENST00000511667 ARID3CA6NKF2 412 aa22.21■■□□□ 1.15
CLDND1-224ENST00000511667 FMN1Q68DA7 1419 aa22.21■■□□□ 1.15
CLDND1-224ENST00000511667 RIMS1Q86UR5 1692 aaKnown RBP22.17■■□□□ 1.14
CLDND1-224ENST00000511667 RAPGEF3O95398 923 aa22.17■■□□□ 1.14
CLDND1-224ENST00000511667 SPATA31D1Q6ZQQ2 1576 aa22.14■■□□□ 1.13
CLDND1-224ENST00000511667 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
CLDND1-224ENST00000511667 CDK13Q14004 1512 aaKnown RBP22.12■■□□□ 1.13
CLDND1-224ENST00000511667 NEO1Q92859 1461 aa22.11■■□□□ 1.13
CLDND1-224ENST00000511667 HECW1Q76N89 1606 aa22.11■■□□□ 1.13
CLDND1-224ENST00000511667 PLEKHD1A6NEE1 506 aa22.11■■□□□ 1.13
CLDND1-224ENST00000511667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.09■■□□□ 1.13
CLDND1-224ENST00000511667 FRMPD1Q5SYB0 1578 aa22.08■■□□□ 1.12
CLDND1-224ENST00000511667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
CLDND1-224ENST00000511667 HNRNPUL2Q1KMD3 747 aaKnown RBP22.07■■□□□ 1.12
CLDND1-224ENST00000511667 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
CLDND1-224ENST00000511667 ARHGEF40Q8TER5 1519 aa22.06■■□□□ 1.12
CLDND1-224ENST00000511667 LRRIQ1Q96JM4 1722 aa22.06■■□□□ 1.12
CLDND1-224ENST00000511667 POGZQ7Z3K3 1410 aa22.05■■□□□ 1.12
CLDND1-224ENST00000511667 CASKIN1Q8WXD9 1431 aa22.05■■□□□ 1.12
CLDND1-224ENST00000511667 TTC37Q6PGP7 1564 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms