RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-233ENST00000510756 GRIN2AQ12879 1464 aa19.37■□□□□ 0.69
CAST-233ENST00000510756 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
CAST-233ENST00000510756 ARAP1Q96P48 1450 aa19.33■□□□□ 0.69
CAST-233ENST00000510756 SAMD9Q5K651 1589 aa19.32■□□□□ 0.68
CAST-233ENST00000510756 KIAA0586Q9BVV6 1533 aa19.31■□□□□ 0.68
CAST-233ENST00000510756 IQGAP2Q13576 1575 aa19.31■□□□□ 0.68
CAST-233ENST00000510756 NUP160Q12769 1436 aa19.29■□□□□ 0.68
CAST-233ENST00000510756 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
CAST-233ENST00000510756 MAP3K1Q13233 1512 aa19.23■□□□□ 0.67
CAST-233ENST00000510756 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
CAST-233ENST00000510756 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
CAST-233ENST00000510756 FMN1Q68DA7 1419 aa19.19■□□□□ 0.66
CAST-233ENST00000510756 CHD1O14646 1710 aa19.16■□□□□ 0.66
CAST-233ENST00000510756 FYCO1Q9BQS8 1478 aa19.15■□□□□ 0.66
CAST-233ENST00000510756 CASKIN1Q8WXD9 1431 aa19.13■□□□□ 0.65
CAST-233ENST00000510756 KIAA0556O60303 1618 aa19.11■□□□□ 0.65
CAST-233ENST00000510756 DISP1Q96F81 1524 aa19.09■□□□□ 0.65
CAST-233ENST00000510756 SHROOM2Q13796 1616 aa19.08■□□□□ 0.65
CAST-233ENST00000510756 FHOD3Q2V2M9 1422 aa19.08■□□□□ 0.65
CAST-233ENST00000510756 TRIM26Q12899 539 aaPredicted RBP19.07■□□□□ 0.64
CAST-233ENST00000510756 CFAP43Q8NDM7 1665 aa19.07■□□□□ 0.64
CAST-233ENST00000510756 APLP2Q06481 763 aa19.06■□□□□ 0.64
CAST-233ENST00000510756 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
CAST-233ENST00000510756 CARMIL2Q6F5E8 1435 aa19.06■□□□□ 0.64
CAST-233ENST00000510756 TIAM1Q13009 1591 aa19.04■□□□□ 0.64
CAST-233ENST00000510756 CLASP1Q7Z460 1538 aa19.04■□□□□ 0.64
CAST-233ENST00000510756 RANGAP1P46060 587 aaPredicted RBP19.02■□□□□ 0.64
CAST-233ENST00000510756 HECW1Q76N89 1606 aa19■□□□□ 0.63
CAST-233ENST00000510756 CCDC18Q5T9S5 1454 aa19■□□□□ 0.63
CAST-233ENST00000510756 FBLN2P98095 1184 aa19■□□□□ 0.63
CAST-233ENST00000510756 JPH4Q96JJ6 628 aa18.99■□□□□ 0.63
CAST-233ENST00000510756 LRRC9Q6ZRR7 1453 aa18.93■□□□□ 0.62
CAST-233ENST00000510756 RAPGEF6Q8TEU7 1601 aa18.92■□□□□ 0.62
CAST-233ENST00000510756 P3H3Q8IVL6 736 aa18.91■□□□□ 0.62
CAST-233ENST00000510756 PRG4Q92954 1404 aaPredicted RBP18.89■□□□□ 0.61
CAST-233ENST00000510756 LRRIQ1Q96JM4 1722 aa18.89■□□□□ 0.61
CAST-233ENST00000510756 ABCA8O94911 1581 aa18.88■□□□□ 0.61
CAST-233ENST00000510756 EHBP1L1Q8N3D4 1523 aa18.86■□□□□ 0.61
CAST-233ENST00000510756 EPRSP07814 1512 aaKnown RBP18.86■□□□□ 0.61
CAST-233ENST00000510756 NUP153P49790 1475 aaKnown RBP18.82■□□□□ 0.6
CAST-233ENST00000510756 RRBP1Q9P2E9 1410 aaKnown RBP18.81■□□□□ 0.6
CAST-233ENST00000510756 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
CAST-233ENST00000510756 KANK4Q5T7N3 995 aaPredicted RBP18.8■□□□□ 0.6
CAST-233ENST00000510756 PTPRGP23470 1445 aa18.79■□□□□ 0.6
CAST-233ENST00000510756 SUPT6HQ7KZ85 1726 aaKnown RBP18.79■□□□□ 0.6
CAST-233ENST00000510756 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
CAST-233ENST00000510756 UHRF1BP1LA0JNW5 1464 aa18.77■□□□□ 0.6
CAST-233ENST00000510756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.76■□□□□ 0.59
CAST-233ENST00000510756 OSCARQ8IYS5 282 aa18.75■□□□□ 0.59
CAST-233ENST00000510756 MTUS2Q5JR59 1369 aa18.74■□□□□ 0.59
CAST-233ENST00000510756 PLB1Q6P1J6 1458 aa18.74■□□□□ 0.59
CAST-233ENST00000510756 UACAQ9BZF9 1416 aa18.73■□□□□ 0.59
CAST-233ENST00000510756 PPARGC1BQ86YN6 1023 aaKnown RBP18.73■□□□□ 0.59
CAST-233ENST00000510756 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
CAST-233ENST00000510756 ADCY10Q96PN6 1610 aa18.73■□□□□ 0.59
CAST-233ENST00000510756 ABCC2Q92887 1545 aa18.72■□□□□ 0.59
CAST-233ENST00000510756 CDK13Q14004 1512 aaKnown RBP18.7■□□□□ 0.58
CAST-233ENST00000510756 MAGI3Q5TCQ9 1506 aa18.7■□□□□ 0.58
CAST-233ENST00000510756 ERCC6L2Q5T890 1561 aa18.69■□□□□ 0.58
CAST-233ENST00000510756 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
CAST-233ENST00000510756 TROQ12816 1431 aaPredicted RBP18.68■□□□□ 0.58
CAST-233ENST00000510756 CCNB3Q8WWL7 1395 aa18.68■□□□□ 0.58
CAST-233ENST00000510756 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
CAST-233ENST00000510756 ATP10BO94823 1461 aa18.66■□□□□ 0.58
CAST-233ENST00000510756 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
CAST-233ENST00000510756 MYOM3Q5VTT5 1437 aa18.64■□□□□ 0.57
CAST-233ENST00000510756 MIA2Q96PC5 1412 aa18.64■□□□□ 0.57
CAST-233ENST00000510756 KDM5BQ9UGL1 1544 aa18.62■□□□□ 0.57
CAST-233ENST00000510756 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
CAST-233ENST00000510756 TCOF1Q13428 1488 aaKnown RBP18.6■□□□□ 0.57
CAST-233ENST00000510756 ITSN2Q9NZM3 1697 aa18.59■□□□□ 0.57
CAST-233ENST00000510756 KIF14Q15058 1648 aa18.58■□□□□ 0.57
CAST-233ENST00000510756 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
CAST-233ENST00000510756 PLEKHD1A6NEE1 506 aa18.55■□□□□ 0.56
CAST-233ENST00000510756 ZCCHC11Q5TAX3 1644 aaKnown RBP18.54■□□□□ 0.56
CAST-233ENST00000510756 PTPN23Q9H3S7 1636 aa18.54■□□□□ 0.56
CAST-233ENST00000510756 ABCC10Q5T3U5 1492 aa18.53■□□□□ 0.56
CAST-233ENST00000510756 GPATCH8Q9UKJ3 1502 aaKnown RBP18.47■□□□□ 0.55
CAST-233ENST00000510756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
CAST-233ENST00000510756 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
CAST-233ENST00000510756 CDC42BPAQ5VT25 1732 aa18.46■□□□□ 0.55
CAST-233ENST00000510756 AKNAQ7Z591 1439 aa18.45■□□□□ 0.54
CAST-233ENST00000510756 HRCP23327 699 aa18.45■□□□□ 0.54
CAST-233ENST00000510756 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
CAST-233ENST00000510756 ARAP3Q8WWN8 1544 aa18.45■□□□□ 0.54
CAST-233ENST00000510756 PREX2Q70Z35 1606 aa18.43■□□□□ 0.54
CAST-233ENST00000510756 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
CAST-233ENST00000510756 DNMT1P26358 1616 aaKnown RBP18.41■□□□□ 0.54
CAST-233ENST00000510756 WDR7Q9Y4E6 1490 aa18.4■□□□□ 0.54
CAST-233ENST00000510756 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
CAST-233ENST00000510756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.53
CAST-233ENST00000510756 MYO5CQ9NQX4 1742 aa18.39■□□□□ 0.53
CAST-233ENST00000510756 RIMBP3CA6NJZ7 1639 aa18.39■□□□□ 0.53
CAST-233ENST00000510756 RIMBP3BA6NNM3 1639 aa18.39■□□□□ 0.53
CAST-233ENST00000510756 RIMBP3Q9UFD9 1639 aa18.39■□□□□ 0.53
CAST-233ENST00000510756 ARID3CA6NKF2 412 aa18.38■□□□□ 0.53
CAST-233ENST00000510756 FAM50AQ14320 339 aaKnown RBP18.37■□□□□ 0.53
CAST-233ENST00000510756 ARHGEF5Q12774 1597 aa18.37■□□□□ 0.53
CAST-233ENST00000510756 CAMSAP2Q08AD1 1489 aa18.36■□□□□ 0.53
CAST-233ENST00000510756 PLEKHH2Q8IVE3 1493 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms