RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 PRXQ9BXM0 1461 aa7.54□□□□□ -1.2
PDLIM5-214ENST00000510099 FANCD2Q9BXW9 1451 aa7.53□□□□□ -1.2
PDLIM5-214ENST00000510099 RAPGEF2Q9Y4G8 1499 aa7.53□□□□□ -1.2
PDLIM5-214ENST00000510099 KIF27Q86VH2 1401 aa7.52□□□□□ -1.2
PDLIM5-214ENST00000510099 MYCNP04198 464 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-214ENST00000510099 CLIP1P30622 1438 aa7.5□□□□□ -1.21
PDLIM5-214ENST00000510099 DNMBPQ6XZF7 1577 aa7.5□□□□□ -1.21
PDLIM5-214ENST00000510099 LAMC3Q9Y6N6 1575 aa7.5□□□□□ -1.21
PDLIM5-214ENST00000510099 FGD5Q6ZNL6 1462 aa7.49□□□□□ -1.21
PDLIM5-214ENST00000510099 UBTFP17480 764 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-214ENST00000510099 NESP48681 1621 aa7.48□□□□□ -1.21
PDLIM5-214ENST00000510099 CUX2O14529 1486 aa7.47□□□□□ -1.21
PDLIM5-214ENST00000510099 TOPBP1Q92547 1522 aa7.47□□□□□ -1.21
PDLIM5-214ENST00000510099 VPS8Q8N3P4 1428 aa7.46□□□□□ -1.21
PDLIM5-214ENST00000510099 SP7Q8TDD2 431 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-214ENST00000510099 POLA1P09884 1462 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-214ENST00000510099 ABCA10Q8WWZ4 1543 aa7.45□□□□□ -1.22
PDLIM5-214ENST00000510099 IGF1RP08069 1367 aa7.44□□□□□ -1.22
PDLIM5-214ENST00000510099 URB2Q14146 1524 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-214ENST00000510099 PDS5BQ9NTI5 1447 aa7.43□□□□□ -1.22
PDLIM5-214ENST00000510099 ARAP1Q96P48 1450 aa7.43□□□□□ -1.22
PDLIM5-214ENST00000510099 AKT1S1Q96B36 256 aa7.41□□□□□ -1.22
PDLIM5-214ENST00000510099 WDR97A6NE52 1622 aa7.41□□□□□ -1.22
PDLIM5-214ENST00000510099 RAD54L2Q9Y4B4 1467 aa7.4□□□□□ -1.22
PDLIM5-214ENST00000510099 CARMIL1Q5VZK9 1371 aa7.39□□□□□ -1.23
PDLIM5-214ENST00000510099 ARHGAP35Q9NRY4 1499 aa7.38□□□□□ -1.23
PDLIM5-214ENST00000510099 PPARGC1BQ86YN6 1023 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-214ENST00000510099 CUL7Q14999 1698 aa7.38□□□□□ -1.23
PDLIM5-214ENST00000510099 ABCA5Q8WWZ7 1642 aa7.38□□□□□ -1.23
PDLIM5-214ENST00000510099 REM2Q8IYK8 340 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-214ENST00000510099 OSCARQ8IYS5 282 aa7.37□□□□□ -1.23
PDLIM5-214ENST00000510099 PIP4P2Q8N4L2 257 aa7.37□□□□□ -1.23
PDLIM5-214ENST00000510099 ATF5Q9Y2D1 282 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-214ENST00000510099 KIF21AQ7Z4S6 1674 aa7.37□□□□□ -1.23
PDLIM5-214ENST00000510099 HAX1O00165 279 aa7.36□□□□□ -1.23
PDLIM5-214ENST00000510099 ZBTB12Q9Y330 459 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-214ENST00000510099 MRC2Q9UBG0 1479 aa7.36□□□□□ -1.23
PDLIM5-214ENST00000510099 ZEB1P37275 1124 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-214ENST00000510099 TARBP1Q13395 1621 aaKnown RBP7.34□□□□□ -1.24
PDLIM5-214ENST00000510099 EFCAB5A4FU69 1503 aa7.32□□□□□ -1.24
PDLIM5-214ENST00000510099 WDR62O43379 1518 aa7.32□□□□□ -1.24
PDLIM5-214ENST00000510099 GAPVD1Q14C86 1478 aa7.32□□□□□ -1.24
PDLIM5-214ENST00000510099 MAP3K1Q13233 1512 aa7.31□□□□□ -1.24
PDLIM5-214ENST00000510099 TTBK1Q5TCY1 1321 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-214ENST00000510099 PITPNM1O00562 1244 aa7.3□□□□□ -1.24
PDLIM5-214ENST00000510099 RANGAP1P46060 587 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-214ENST00000510099 TDRD9Q8NDG6 1382 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-214ENST00000510099 FHAD1B1AJZ9 1412 aa7.29□□□□□ -1.24
PDLIM5-214ENST00000510099 FOXD4L1Q9NU39 408 aa7.29□□□□□ -1.24
PDLIM5-214ENST00000510099 IFT140Q96RY7 1462 aa7.29□□□□□ -1.24
PDLIM5-214ENST00000510099 ADAMTS12P58397 1594 aa7.29□□□□□ -1.24
PDLIM5-214ENST00000510099 CTTNBP2Q8WZ74 1663 aa7.28□□□□□ -1.24
PDLIM5-214ENST00000510099 AQRO60306 1485 aaKnown RBP eCLIP7.28□□□□□ -1.24
PDLIM5-214ENST00000510099 TIAM1Q13009 1591 aa7.28□□□□□ -1.24
PDLIM5-214ENST00000510099 FYCO1Q9BQS8 1478 aa7.27□□□□□ -1.25
PDLIM5-214ENST00000510099 PCF11O94913 1555 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-214ENST00000510099 SAMD9Q5K651 1589 aa7.27□□□□□ -1.25
PDLIM5-214ENST00000510099 CFAP43Q8NDM7 1665 aa7.27□□□□□ -1.25
PDLIM5-214ENST00000510099 RRBP1Q9P2E9 1410 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-214ENST00000510099 PBRM1Q86U86 1689 aa7.26□□□□□ -1.25
PDLIM5-214ENST00000510099 THOC2Q8NI27 1593 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-214ENST00000510099 GRIN2BQ13224 1484 aa7.26□□□□□ -1.25
PDLIM5-214ENST00000510099 SLC4A1APQ9BWU0 796 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-214ENST00000510099 FHOD3Q2V2M9 1422 aa7.26□□□□□ -1.25
PDLIM5-214ENST00000510099 FXR2P51116 673 aaKnown RBP eCLIP7.25□□□□□ -1.25
PDLIM5-214ENST00000510099 KANK4Q5T7N3 995 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-214ENST00000510099 CASKIN1Q8WXD9 1431 aa7.25□□□□□ -1.25
PDLIM5-214ENST00000510099 SNAPC4Q5SXM2 1469 aa7.24□□□□□ -1.25
PDLIM5-214ENST00000510099 FMN1Q68DA7 1419 aa7.24□□□□□ -1.25
PDLIM5-214ENST00000510099 ERCC6Q03468 1493 aa7.24□□□□□ -1.25
PDLIM5-214ENST00000510099 LRRC9Q6ZRR7 1453 aa7.24□□□□□ -1.25
PDLIM5-214ENST00000510099 ZNF608Q9ULD9 1512 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-214ENST00000510099 CCER1Q8TC90 406 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-214ENST00000510099 CCNB3Q8WWL7 1395 aa7.21□□□□□ -1.25
PDLIM5-214ENST00000510099 EIF4G3O43432 1585 aaKnown RBP7.21□□□□□ -1.25
PDLIM5-214ENST00000510099 IQGAP2Q13576 1575 aa7.2□□□□□ -1.26
PDLIM5-214ENST00000510099 EVX2Q03828 476 aa7.2□□□□□ -1.26
PDLIM5-214ENST00000510099 MAGI1Q96QZ7 1491 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-214ENST00000510099 UGGT2Q9NYU1 1516 aa7.19□□□□□ -1.26
PDLIM5-214ENST00000510099 PHLDB1Q86UU1 1377 aa7.19□□□□□ -1.26
PDLIM5-214ENST00000510099 GRIN2AQ12879 1464 aa7.17□□□□□ -1.26
PDLIM5-214ENST00000510099 P3H3Q8IVL6 736 aa7.17□□□□□ -1.26
PDLIM5-214ENST00000510099 KIAA0586Q9BVV6 1533 aa7.17□□□□□ -1.26
PDLIM5-214ENST00000510099 SYNJ2O15056 1496 aa7.16□□□□□ -1.26
PDLIM5-214ENST00000510099 CCDC18Q5T9S5 1454 aa7.16□□□□□ -1.26
PDLIM5-214ENST00000510099 EHBP1L1Q8N3D4 1523 aa7.16□□□□□ -1.26
PDLIM5-214ENST00000510099 HECW1Q76N89 1606 aa7.16□□□□□ -1.26
PDLIM5-214ENST00000510099 CLEC11AQ9Y240 323 aa7.15□□□□□ -1.26
PDLIM5-214ENST00000510099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.15□□□□□ -1.26
PDLIM5-214ENST00000510099 KIAA0556O60303 1618 aa7.15□□□□□ -1.27
PDLIM5-214ENST00000510099 ARHGEF11O15085 1522 aa7.14□□□□□ -1.27
PDLIM5-214ENST00000510099 NUP160Q12769 1436 aa7.14□□□□□ -1.27
PDLIM5-214ENST00000510099 DHX57Q6P158 1386 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-214ENST00000510099 DISP1Q96F81 1524 aa7.14□□□□□ -1.27
PDLIM5-214ENST00000510099 CLSPNQ9HAW4 1339 aa7.14□□□□□ -1.27
PDLIM5-214ENST00000510099 PRKAR2AP13861 404 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-214ENST00000510099 LRRIQ1Q96JM4 1722 aa7.13□□□□□ -1.27
PDLIM5-214ENST00000510099 CEP170Q5SW79 1584 aa7.12□□□□□ -1.27
PDLIM5-214ENST00000510099 FGD6Q6ZV73 1430 aa7.12□□□□□ -1.27
PDLIM5-214ENST00000510099 MTUS2Q5JR59 1369 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms