RNA–Protein interactions for RNA: ENST00000509507.5

CALCOCO2-215, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,512 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-215ENST00000509507 FHAD1B1AJZ9 1412 aa13.76□□□□□ -0.21
CALCOCO2-215ENST00000509507 CUL7Q14999 1698 aa13.76□□□□□ -0.21
CALCOCO2-215ENST00000509507 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
CALCOCO2-215ENST00000509507 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
CALCOCO2-215ENST00000509507 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
CALCOCO2-215ENST00000509507 NUP160Q12769 1436 aa13.7□□□□□ -0.22
CALCOCO2-215ENST00000509507 IGF1RP08069 1367 aa13.68□□□□□ -0.22
CALCOCO2-215ENST00000509507 NEUROD1Q13562 356 aa13.68□□□□□ -0.22
CALCOCO2-215ENST00000509507 RUSC2Q8N2Y8 1516 aa13.67□□□□□ -0.22
CALCOCO2-215ENST00000509507 GTF3C3Q9Y5Q9 886 aa13.64□□□□□ -0.23
CALCOCO2-215ENST00000509507 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
CALCOCO2-215ENST00000509507 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
CALCOCO2-215ENST00000509507 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
CALCOCO2-215ENST00000509507 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
CALCOCO2-215ENST00000509507 RAPGEF2Q9Y4G8 1499 aa13.57□□□□□ -0.24
CALCOCO2-215ENST00000509507 CYB5RLQ6IPT4 315 aa13.56□□□□□ -0.24
CALCOCO2-215ENST00000509507 KIAA0586Q9BVV6 1533 aa13.55□□□□□ -0.24
CALCOCO2-215ENST00000509507 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
CALCOCO2-215ENST00000509507 IQGAP2Q13576 1575 aa13.54□□□□□ -0.24
CALCOCO2-215ENST00000509507 LOC105371045A0A1W2PR82 267 aa13.54□□□□□ -0.24
CALCOCO2-215ENST00000509507 PRG4Q92954 1404 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO2-215ENST00000509507 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
CALCOCO2-215ENST00000509507 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
CALCOCO2-215ENST00000509507 EEA1Q15075 1411 aa13.5□□□□□ -0.25
CALCOCO2-215ENST00000509507 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
CALCOCO2-215ENST00000509507 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO2-215ENST00000509507 DIEXFQ68CQ4 756 aaKnown RBP13.44□□□□□ -0.26
CALCOCO2-215ENST00000509507 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
CALCOCO2-215ENST00000509507 UGGT2Q9NYU1 1516 aa13.43□□□□□ -0.26
CALCOCO2-215ENST00000509507 KIF21BO75037 1637 aa13.42□□□□□ -0.26
CALCOCO2-215ENST00000509507 KIAA0556O60303 1618 aa13.42□□□□□ -0.26
CALCOCO2-215ENST00000509507 DISP1Q96F81 1524 aa13.41□□□□□ -0.26
CALCOCO2-215ENST00000509507 CARMIL2Q6F5E8 1435 aa13.41□□□□□ -0.26
CALCOCO2-215ENST00000509507 ADCY10Q96PN6 1610 aa13.4□□□□□ -0.27
CALCOCO2-215ENST00000509507 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
CALCOCO2-215ENST00000509507 BCL11AQ9H165 835 aa13.35□□□□□ -0.27
CALCOCO2-215ENST00000509507 PTPRGP23470 1445 aa13.34□□□□□ -0.27
CALCOCO2-215ENST00000509507 GOLGA3Q08378 1498 aa13.33□□□□□ -0.27
CALCOCO2-215ENST00000509507 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
CALCOCO2-215ENST00000509507 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
CALCOCO2-215ENST00000509507 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
CALCOCO2-215ENST00000509507 ANP32EQ9BTT0 268 aa13.29□□□□□ -0.28
CALCOCO2-215ENST00000509507 ABCC2Q92887 1545 aa13.29□□□□□ -0.28
CALCOCO2-215ENST00000509507 KIF13AQ9H1H9 1805 aa13.28□□□□□ -0.28
CALCOCO2-215ENST00000509507 MAPKBP1O60336 1514 aa13.27□□□□□ -0.28
CALCOCO2-215ENST00000509507 UACAQ9BZF9 1416 aa13.26□□□□□ -0.29
CALCOCO2-215ENST00000509507 UHRF1BP1LA0JNW5 1464 aa13.26□□□□□ -0.29
CALCOCO2-215ENST00000509507 RANGAP1P46060 587 aaPredicted RBP13.26□□□□□ -0.29
CALCOCO2-215ENST00000509507 ZCCHC11Q5TAX3 1644 aaKnown RBP13.26□□□□□ -0.29
CALCOCO2-215ENST00000509507 PLB1Q6P1J6 1458 aa13.25□□□□□ -0.29
CALCOCO2-215ENST00000509507 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
CALCOCO2-215ENST00000509507 CCER1Q8TC90 406 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO2-215ENST00000509507 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
CALCOCO2-215ENST00000509507 ABCA8O94911 1581 aa13.24□□□□□ -0.29
CALCOCO2-215ENST00000509507 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
CALCOCO2-215ENST00000509507 P3H3Q8IVL6 736 aa13.23□□□□□ -0.29
CALCOCO2-215ENST00000509507 DIP2BQ9P265 1576 aa13.23□□□□□ -0.29
CALCOCO2-215ENST00000509507 FHOD3Q2V2M9 1422 aa13.21□□□□□ -0.29
CALCOCO2-215ENST00000509507 ZNF316A6NFI3 1004 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO2-215ENST00000509507 KDM5BQ9UGL1 1544 aa13.2□□□□□ -0.3
CALCOCO2-215ENST00000509507 RAPGEF6Q8TEU7 1601 aa13.2□□□□□ -0.3
CALCOCO2-215ENST00000509507 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
CALCOCO2-215ENST00000509507 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
CALCOCO2-215ENST00000509507 TSPOAP1O95153 1857 aa13.17□□□□□ -0.3
CALCOCO2-215ENST00000509507 ARHGAP35Q9NRY4 1499 aa13.15□□□□□ -0.3
CALCOCO2-215ENST00000509507 FAM69CQ0P6D2 419 aa13.13□□□□□ -0.31
CALCOCO2-215ENST00000509507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-215ENST00000509507 WDR7Q9Y4E6 1490 aa13.12□□□□□ -0.31
CALCOCO2-215ENST00000509507 ARID3CA6NKF2 412 aa13.12□□□□□ -0.31
CALCOCO2-215ENST00000509507 NUP153P49790 1475 aaKnown RBP13.12□□□□□ -0.31
CALCOCO2-215ENST00000509507 EPRSP07814 1512 aaKnown RBP13.11□□□□□ -0.31
CALCOCO2-215ENST00000509507 GLI2P10070 1586 aa13.1□□□□□ -0.31
CALCOCO2-215ENST00000509507 ATP10BO94823 1461 aa13.1□□□□□ -0.31
CALCOCO2-215ENST00000509507 MAP3K4Q9Y6R4 1608 aa13.09□□□□□ -0.31
CALCOCO2-215ENST00000509507 PPRC1Q5VV67 1664 aaKnown RBP13.09□□□□□ -0.31
CALCOCO2-215ENST00000509507 HECW1Q76N89 1606 aa13.09□□□□□ -0.31
CALCOCO2-215ENST00000509507 ERICH6Q7L0X2 663 aa13.08□□□□□ -0.31
CALCOCO2-215ENST00000509507 FMN1Q68DA7 1419 aa13.08□□□□□ -0.32
CALCOCO2-215ENST00000509507 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
CALCOCO2-215ENST00000509507 LRRIQ1Q96JM4 1722 aa13.06□□□□□ -0.32
CALCOCO2-215ENST00000509507 PCF11O94913 1555 aaKnown RBP13.06□□□□□ -0.32
CALCOCO2-215ENST00000509507 CLIP1P30622 1438 aa13.06□□□□□ -0.32
CALCOCO2-215ENST00000509507 CFAP43Q8NDM7 1665 aa13.06□□□□□ -0.32
CALCOCO2-215ENST00000509507 CDK13Q14004 1512 aaKnown RBP13.05□□□□□ -0.32
CALCOCO2-215ENST00000509507 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
CALCOCO2-215ENST00000509507 TSHZ2Q9NRE2 1034 aa13.03□□□□□ -0.32
CALCOCO2-215ENST00000509507 KDM6BO15054 1643 aa13.02□□□□□ -0.32
CALCOCO2-215ENST00000509507 KCNH8Q96L42 1107 aa13.02□□□□□ -0.33
CALCOCO2-215ENST00000509507 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.33
CALCOCO2-215ENST00000509507 CEP162Q5TB80 1403 aa13.02□□□□□ -0.33
CALCOCO2-215ENST00000509507 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
CALCOCO2-215ENST00000509507 ATP1B4Q9UN42 357 aaPredicted RBP13.01□□□□□ -0.33
CALCOCO2-215ENST00000509507 ABCA9Q8IUA7 1624 aa13.01□□□□□ -0.33
CALCOCO2-215ENST00000509507 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
CALCOCO2-215ENST00000509507 FYCO1Q9BQS8 1478 aa12.98□□□□□ -0.33
CALCOCO2-215ENST00000509507 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
CALCOCO2-215ENST00000509507 MIER1Q8N108 512 aa12.98□□□□□ -0.33
CALCOCO2-215ENST00000509507 YTHDC1Q96MU7 727 aaKnown RBP12.98□□□□□ -0.33
CALCOCO2-215ENST00000509507 CD109Q6YHK3 1445 aa12.97□□□□□ -0.33
CALCOCO2-215ENST00000509507 CASKIN1Q8WXD9 1431 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms