RNA–Protein interactions for RNA: ENST00000509507.5

CALCOCO2-215, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-215ENST00000509507 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
CALCOCO2-215ENST00000509507 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
CALCOCO2-215ENST00000509507 ABCC9O60706 1549 aa17.09■□□□□ 0.33
CALCOCO2-215ENST00000509507 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
CALCOCO2-215ENST00000509507 NACADO15069 1562 aa16.4■□□□□ 0.22
CALCOCO2-215ENST00000509507 ZCCHC6Q5VYS8 1495 aaKnown RBP16.36■□□□□ 0.21
CALCOCO2-215ENST00000509507 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
CALCOCO2-215ENST00000509507 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.19
CALCOCO2-215ENST00000509507 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
CALCOCO2-215ENST00000509507 UNC13AQ9UPW8 1703 aa16.17■□□□□ 0.18
CALCOCO2-215ENST00000509507 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
CALCOCO2-215ENST00000509507 BICRAQ9NZM4 1560 aa15.95■□□□□ 0.14
CALCOCO2-215ENST00000509507 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
CALCOCO2-215ENST00000509507 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
CALCOCO2-215ENST00000509507 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
CALCOCO2-215ENST00000509507 EIF4G1Q04637 1599 aaKnown RBP15.54■□□□□ 0.08
CALCOCO2-215ENST00000509507 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
CALCOCO2-215ENST00000509507 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
CALCOCO2-215ENST00000509507 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
CALCOCO2-215ENST00000509507 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
CALCOCO2-215ENST00000509507 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
CALCOCO2-215ENST00000509507 SMARCA2P51531 1590 aa15.13■□□□□ 0.01
CALCOCO2-215ENST00000509507 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
CALCOCO2-215ENST00000509507 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
CALCOCO2-215ENST00000509507 NCAPD3P42695 1498 aa15.09■□□□□ 0.01
CALCOCO2-215ENST00000509507 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
CALCOCO2-215ENST00000509507 HMGXB3Q12766 1538 aa15.08■□□□□ 0.01
CALCOCO2-215ENST00000509507 BAZ1BQ9UIG0 1483 aaKnown RBP15.03■□□□□ -0
CALCOCO2-215ENST00000509507 HRCP23327 699 aa15.01□□□□□ -0.01
CALCOCO2-215ENST00000509507 WIZO95785 1651 aa15.01□□□□□ -0.01
CALCOCO2-215ENST00000509507 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
CALCOCO2-215ENST00000509507 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
CALCOCO2-215ENST00000509507 MYT1Q01538 1121 aa14.86□□□□□ -0.03
CALCOCO2-215ENST00000509507 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
CALCOCO2-215ENST00000509507 NESP48681 1621 aa14.79□□□□□ -0.04
CALCOCO2-215ENST00000509507 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
CALCOCO2-215ENST00000509507 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
CALCOCO2-215ENST00000509507 KIF21AQ7Z4S6 1674 aa14.69□□□□□ -0.06
CALCOCO2-215ENST00000509507 CADPSQ9ULU8 1353 aa14.64□□□□□ -0.07
CALCOCO2-215ENST00000509507 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
CALCOCO2-215ENST00000509507 CCDC88BA6NC98 1476 aa14.61□□□□□ -0.07
CALCOCO2-215ENST00000509507 THOC2Q8NI27 1593 aaKnown RBP14.61□□□□□ -0.07
CALCOCO2-215ENST00000509507 PDS5BQ9NTI5 1447 aa14.61□□□□□ -0.07
CALCOCO2-215ENST00000509507 CFTRP13569 1480 aa14.58□□□□□ -0.07
CALCOCO2-215ENST00000509507 CUX2O14529 1486 aa14.56□□□□□ -0.08
CALCOCO2-215ENST00000509507 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
CALCOCO2-215ENST00000509507 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
CALCOCO2-215ENST00000509507 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
CALCOCO2-215ENST00000509507 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
CALCOCO2-215ENST00000509507 WDR62O43379 1518 aa14.47□□□□□ -0.09
CALCOCO2-215ENST00000509507 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
CALCOCO2-215ENST00000509507 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
CALCOCO2-215ENST00000509507 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
CALCOCO2-215ENST00000509507 PCGF6Q9BYE7 350 aa14.29□□□□□ -0.12
CALCOCO2-215ENST00000509507 PPARGC1BQ86YN6 1023 aaKnown RBP14.28□□□□□ -0.12
CALCOCO2-215ENST00000509507 ABCC8Q09428 1581 aa14.26□□□□□ -0.13
CALCOCO2-215ENST00000509507 AEBP2Q6ZN18 517 aaPredicted RBP14.25□□□□□ -0.13
CALCOCO2-215ENST00000509507 ZEB1P37275 1124 aaPredicted RBP14.24□□□□□ -0.13
CALCOCO2-215ENST00000509507 CUX1P39880 1505 aa14.2□□□□□ -0.14
CALCOCO2-215ENST00000509507 IFT140Q96RY7 1462 aa14.19□□□□□ -0.14
CALCOCO2-215ENST00000509507 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
CALCOCO2-215ENST00000509507 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
CALCOCO2-215ENST00000509507 TARBP1Q13395 1621 aaKnown RBP14.18□□□□□ -0.14
CALCOCO2-215ENST00000509507 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
CALCOCO2-215ENST00000509507 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
CALCOCO2-215ENST00000509507 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
CALCOCO2-215ENST00000509507 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
CALCOCO2-215ENST00000509507 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
CALCOCO2-215ENST00000509507 TTBK1Q5TCY1 1321 aaPredicted RBP14.11□□□□□ -0.15
CALCOCO2-215ENST00000509507 BIVM-ERCC5R4GMW8 1640 aa14.11□□□□□ -0.15
CALCOCO2-215ENST00000509507 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
CALCOCO2-215ENST00000509507 WDR97A6NE52 1622 aa14.1□□□□□ -0.15
CALCOCO2-215ENST00000509507 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
CALCOCO2-215ENST00000509507 SOGA1O94964 1423 aa14.08□□□□□ -0.16
CALCOCO2-215ENST00000509507 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.16
CALCOCO2-215ENST00000509507 TRIM26Q12899 539 aaPredicted RBP14.05□□□□□ -0.16
CALCOCO2-215ENST00000509507 AQRO60306 1485 aaKnown RBP eCLIP14.05□□□□□ -0.161e-6■■■■□ 26.1
CALCOCO2-215ENST00000509507 PBRM1Q86U86 1689 aa14.02□□□□□ -0.17
CALCOCO2-215ENST00000509507 TDRD9Q8NDG6 1382 aaKnown RBP14.01□□□□□ -0.17
CALCOCO2-215ENST00000509507 CHD1O14646 1710 aa14□□□□□ -0.17
CALCOCO2-215ENST00000509507 ABCA10Q8WWZ4 1543 aa13.99□□□□□ -0.17
CALCOCO2-215ENST00000509507 ABCA5Q8WWZ7 1642 aa13.99□□□□□ -0.17
CALCOCO2-215ENST00000509507 SNAPC4Q5SXM2 1469 aa13.96□□□□□ -0.18
CALCOCO2-215ENST00000509507 GAPVD1Q14C86 1478 aa13.95□□□□□ -0.18
CALCOCO2-215ENST00000509507 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
CALCOCO2-215ENST00000509507 MAGI1Q96QZ7 1491 aaPredicted RBP13.91□□□□□ -0.18
CALCOCO2-215ENST00000509507 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
CALCOCO2-215ENST00000509507 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
CALCOCO2-215ENST00000509507 FBLN2P98095 1184 aa13.87□□□□□ -0.19
CALCOCO2-215ENST00000509507 SYNJ2O15056 1496 aa13.86□□□□□ -0.19
CALCOCO2-215ENST00000509507 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
CALCOCO2-215ENST00000509507 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
CALCOCO2-215ENST00000509507 CHMP7Q8WUX9 453 aaPredicted RBP13.81□□□□□ -0.2
CALCOCO2-215ENST00000509507 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
CALCOCO2-215ENST00000509507 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
CALCOCO2-215ENST00000509507 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
CALCOCO2-215ENST00000509507 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO2-215ENST00000509507 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
CALCOCO2-215ENST00000509507 GRIN2AQ12879 1464 aa13.78□□□□□ -0.2
CALCOCO2-215ENST00000509507 KIF27Q86VH2 1401 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms