RNA–Protein interactions for RNA: ENST00000509148.1

RACK1-221, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-221ENST00000509148 SHROOM2Q13796 1616 aa17.23■□□□□ 0.35
RACK1-221ENST00000509148 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
RACK1-221ENST00000509148 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.34
RACK1-221ENST00000509148 CUL7Q14999 1698 aa17.16■□□□□ 0.34
RACK1-221ENST00000509148 RUSC2Q8N2Y8 1516 aa17.15■□□□□ 0.34
RACK1-221ENST00000509148 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
RACK1-221ENST00000509148 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
RACK1-221ENST00000509148 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
RACK1-221ENST00000509148 CARMIL2Q6F5E8 1435 aa17.01■□□□□ 0.31
RACK1-221ENST00000509148 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
RACK1-221ENST00000509148 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
RACK1-221ENST00000509148 PTPRGP23470 1445 aa16.98■□□□□ 0.31
RACK1-221ENST00000509148 IQGAP2Q13576 1575 aa16.97■□□□□ 0.31
RACK1-221ENST00000509148 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.31
RACK1-221ENST00000509148 ADCY10Q96PN6 1610 aa16.93■□□□□ 0.3
RACK1-221ENST00000509148 MAPKBP1O60336 1514 aa16.93■□□□□ 0.3
RACK1-221ENST00000509148 FAM69CQ0P6D2 419 aa16.93■□□□□ 0.3
RACK1-221ENST00000509148 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
RACK1-221ENST00000509148 ABCC10Q5T3U5 1492 aa16.92■□□□□ 0.3
RACK1-221ENST00000509148 UGGT2Q9NYU1 1516 aa16.87■□□□□ 0.29
RACK1-221ENST00000509148 DISP1Q96F81 1524 aa16.86■□□□□ 0.29
RACK1-221ENST00000509148 KIF13AQ9H1H9 1805 aa16.85■□□□□ 0.29
RACK1-221ENST00000509148 UACAQ9BZF9 1416 aa16.85■□□□□ 0.29
RACK1-221ENST00000509148 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
RACK1-221ENST00000509148 UHRF1BP1LA0JNW5 1464 aa16.84■□□□□ 0.29
RACK1-221ENST00000509148 PRXQ9BXM0 1461 aa16.84■□□□□ 0.29
RACK1-221ENST00000509148 DIP2BQ9P265 1576 aa16.82■□□□□ 0.28
RACK1-221ENST00000509148 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
RACK1-221ENST00000509148 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
RACK1-221ENST00000509148 KIAA0556O60303 1618 aa16.79■□□□□ 0.28
RACK1-221ENST00000509148 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
RACK1-221ENST00000509148 ASXL2Q76L83 1435 aa16.78■□□□□ 0.28
RACK1-221ENST00000509148 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.28
RACK1-221ENST00000509148 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
RACK1-221ENST00000509148 EEA1Q15075 1411 aa16.75■□□□□ 0.27
RACK1-221ENST00000509148 KDM5BQ9UGL1 1544 aa16.75■□□□□ 0.27
RACK1-221ENST00000509148 GLI2P10070 1586 aa16.7■□□□□ 0.26
RACK1-221ENST00000509148 KDM6BO15054 1643 aa16.67■□□□□ 0.26
RACK1-221ENST00000509148 EPRSP07814 1512 aaKnown RBP16.66■□□□□ 0.26
RACK1-221ENST00000509148 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
RACK1-221ENST00000509148 TSPOAP1O95153 1857 aa16.65■□□□□ 0.26
RACK1-221ENST00000509148 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
RACK1-221ENST00000509148 ABCA8O94911 1581 aa16.64■□□□□ 0.25
RACK1-221ENST00000509148 P3H3Q8IVL6 736 aa16.63■□□□□ 0.25
RACK1-221ENST00000509148 TEX14Q8IWB6 1497 aa16.61■□□□□ 0.25
RACK1-221ENST00000509148 KCNH8Q96L42 1107 aa16.58■□□□□ 0.24
RACK1-221ENST00000509148 MAP3K4Q9Y6R4 1608 aa16.57■□□□□ 0.24
RACK1-221ENST00000509148 SAMD9Q5K651 1589 aa16.56■□□□□ 0.24
RACK1-221ENST00000509148 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
RACK1-221ENST00000509148 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
RACK1-221ENST00000509148 CD109Q6YHK3 1445 aa16.54■□□□□ 0.24
RACK1-221ENST00000509148 ARID3CA6NKF2 412 aa16.53■□□□□ 0.24
RACK1-221ENST00000509148 ATP10BO94823 1461 aa16.53■□□□□ 0.24
RACK1-221ENST00000509148 KIF21BO75037 1637 aa16.52■□□□□ 0.24
RACK1-221ENST00000509148 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
RACK1-221ENST00000509148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
RACK1-221ENST00000509148 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
RACK1-221ENST00000509148 COL17A1Q9UMD9 1497 aaPredicted RBP16.49■□□□□ 0.23
RACK1-221ENST00000509148 FHOD3Q2V2M9 1422 aa16.49■□□□□ 0.23
RACK1-221ENST00000509148 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
RACK1-221ENST00000509148 CFAP43Q8NDM7 1665 aa16.48■□□□□ 0.23
RACK1-221ENST00000509148 RAPGEF6Q8TEU7 1601 aa16.48■□□□□ 0.23
RACK1-221ENST00000509148 EFCAB5A4FU69 1503 aa16.47■□□□□ 0.23
RACK1-221ENST00000509148 KDM4FA0A1W2PPD8 638 aa16.47■□□□□ 0.23
RACK1-221ENST00000509148 NUP153P49790 1475 aaKnown RBP16.43■□□□□ 0.22
RACK1-221ENST00000509148 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
RACK1-221ENST00000509148 PHLDB1Q86UU1 1377 aa16.42■□□□□ 0.22
RACK1-221ENST00000509148 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
RACK1-221ENST00000509148 ABCA9Q8IUA7 1624 aa16.38■□□□□ 0.21
RACK1-221ENST00000509148 ARAP3Q8WWN8 1544 aa16.38■□□□□ 0.21
RACK1-221ENST00000509148 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
RACK1-221ENST00000509148 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
RACK1-221ENST00000509148 NEO1Q92859 1461 aa16.35■□□□□ 0.21
RACK1-221ENST00000509148 ATP1B4Q9UN42 357 aaPredicted RBP16.33■□□□□ 0.2
RACK1-221ENST00000509148 ARHGAP35Q9NRY4 1499 aa16.32■□□□□ 0.2
RACK1-221ENST00000509148 CDK11AQ9UQ88 783 aaPredicted RBP16.31■□□□□ 0.2
RACK1-221ENST00000509148 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
RACK1-221ENST00000509148 CDK13Q14004 1512 aaKnown RBP16.27■□□□□ 0.2
RACK1-221ENST00000509148 HECW1Q76N89 1606 aa16.27■□□□□ 0.19
RACK1-221ENST00000509148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.25■□□□□ 0.19
RACK1-221ENST00000509148 FANCAO15360 1455 aa16.24■□□□□ 0.19
RACK1-221ENST00000509148 AKNAQ7Z591 1439 aa16.24■□□□□ 0.19
RACK1-221ENST00000509148 DENND4BO75064 1496 aaPredicted RBP16.23■□□□□ 0.19
RACK1-221ENST00000509148 CFAP74Q9C0B2 1584 aa16.22■□□□□ 0.19
RACK1-221ENST00000509148 PLCH2O75038 1416 aa16.2■□□□□ 0.18
RACK1-221ENST00000509148 TTC37Q6PGP7 1564 aa16.2■□□□□ 0.18
RACK1-221ENST00000509148 CLIP1P30622 1438 aa16.19■□□□□ 0.18
RACK1-221ENST00000509148 TROQ12816 1431 aaPredicted RBP16.19■□□□□ 0.18
RACK1-221ENST00000509148 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
RACK1-221ENST00000509148 ARID4BQ4LE39 1312 aaPredicted RBP16.18■□□□□ 0.18
RACK1-221ENST00000509148 CASKIN1Q8WXD9 1431 aa16.17■□□□□ 0.18
RACK1-221ENST00000509148 FRMPD1Q5SYB0 1578 aa16.17■□□□□ 0.18
RACK1-221ENST00000509148 CCDC18Q5T9S5 1454 aa16.15■□□□□ 0.18
RACK1-221ENST00000509148 SCAPERQ9BY12 1400 aa16.14■□□□□ 0.17
RACK1-221ENST00000509148 FOXD1Q16676 465 aa16.14■□□□□ 0.17
RACK1-221ENST00000509148 KIF14Q15058 1648 aa16.14■□□□□ 0.17
RACK1-221ENST00000509148 MAGI2Q86UL8 1455 aa16.14■□□□□ 0.17
RACK1-221ENST00000509148 RICTORQ6R327 1708 aa16.12■□□□□ 0.17
RACK1-221ENST00000509148 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
RACK1-221ENST00000509148 ARHGEF40Q8TER5 1519 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms