RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 KIAA0586Q9BVV6 1533 aa24.85■■□□□ 1.57
CALCOCO2-211ENST00000508679 CTTNBP2Q8WZ74 1663 aa24.84■■□□□ 1.57
CALCOCO2-211ENST00000508679 IQGAP2Q13576 1575 aa24.76■■□□□ 1.55
CALCOCO2-211ENST00000508679 GOLGA3Q08378 1498 aa24.74■■□□□ 1.55
CALCOCO2-211ENST00000508679 ERCC6L2Q5T890 1561 aa24.73■■□□□ 1.55
CALCOCO2-211ENST00000508679 ARHGEF11O15085 1522 aa24.72■■□□□ 1.55
CALCOCO2-211ENST00000508679 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
CALCOCO2-211ENST00000508679 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
CALCOCO2-211ENST00000508679 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
CALCOCO2-211ENST00000508679 JPH4Q96JJ6 628 aa24.69■■□□□ 1.54
CALCOCO2-211ENST00000508679 UGGT2Q9NYU1 1516 aa24.69■■□□□ 1.54
CALCOCO2-211ENST00000508679 PRG4Q92954 1404 aaPredicted RBP24.63■■□□□ 1.53
CALCOCO2-211ENST00000508679 DISP1Q96F81 1524 aa24.63■■□□□ 1.53
CALCOCO2-211ENST00000508679 ARAP1Q96P48 1450 aa24.58■■□□□ 1.52
CALCOCO2-211ENST00000508679 SAMD9Q5K651 1589 aa24.57■■□□□ 1.52
CALCOCO2-211ENST00000508679 KIAA0556O60303 1618 aa24.55■■□□□ 1.52
CALCOCO2-211ENST00000508679 EHMT2Q96KQ7 1210 aa24.53■■□□□ 1.52
CALCOCO2-211ENST00000508679 TNIKQ9UKE5 1360 aa24.51■■□□□ 1.51
CALCOCO2-211ENST00000508679 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
CALCOCO2-211ENST00000508679 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
CALCOCO2-211ENST00000508679 CARMIL2Q6F5E8 1435 aa24.47■■□□□ 1.51
CALCOCO2-211ENST00000508679 EFCAB5A4FU69 1503 aa24.44■■□□□ 1.5
CALCOCO2-211ENST00000508679 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
CALCOCO2-211ENST00000508679 PTPRGP23470 1445 aa24.35■■□□□ 1.49
CALCOCO2-211ENST00000508679 CYB5RLQ6IPT4 315 aa24.35■■□□□ 1.49
CALCOCO2-211ENST00000508679 FHOD3Q2V2M9 1422 aa24.32■■□□□ 1.48
CALCOCO2-211ENST00000508679 ADCY10Q96PN6 1610 aa24.31■■□□□ 1.48
CALCOCO2-211ENST00000508679 ABCA8O94911 1581 aa24.3■■□□□ 1.48
CALCOCO2-211ENST00000508679 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
CALCOCO2-211ENST00000508679 RANGAP1P46060 587 aaPredicted RBP24.29■■□□□ 1.48
CALCOCO2-211ENST00000508679 CLIP1P30622 1438 aa24.28■■□□□ 1.48
CALCOCO2-211ENST00000508679 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
CALCOCO2-211ENST00000508679 UHRF1BP1LA0JNW5 1464 aa24.26■■□□□ 1.47
CALCOCO2-211ENST00000508679 PLB1Q6P1J6 1458 aa24.25■■□□□ 1.47
CALCOCO2-211ENST00000508679 UACAQ9BZF9 1416 aa24.24■■□□□ 1.47
CALCOCO2-211ENST00000508679 ABCC2Q92887 1545 aa24.23■■□□□ 1.47
CALCOCO2-211ENST00000508679 RAPGEF6Q8TEU7 1601 aa24.19■■□□□ 1.46
CALCOCO2-211ENST00000508679 TTBK1Q5TCY1 1321 aaPredicted RBP24.16■■□□□ 1.46
CALCOCO2-211ENST00000508679 KDM5BQ9UGL1 1544 aa24.16■■□□□ 1.46
CALCOCO2-211ENST00000508679 FMN1Q68DA7 1419 aa24.14■■□□□ 1.45
CALCOCO2-211ENST00000508679 NUP153P49790 1475 aaKnown RBP24.12■■□□□ 1.45
CALCOCO2-211ENST00000508679 LRRIQ1Q96JM4 1722 aa24.12■■□□□ 1.45
CALCOCO2-211ENST00000508679 ZCCHC11Q5TAX3 1644 aaKnown RBP24.11■■□□□ 1.45
CALCOCO2-211ENST00000508679 PCF11O94913 1555 aaKnown RBP24.08■■□□□ 1.45
CALCOCO2-211ENST00000508679 MAPKBP1O60336 1514 aa24.06■■□□□ 1.44
CALCOCO2-211ENST00000508679 ATP10BO94823 1461 aa24.06■■□□□ 1.44
CALCOCO2-211ENST00000508679 CASKIN1Q8WXD9 1431 aa24.05■■□□□ 1.44
CALCOCO2-211ENST00000508679 HECW1Q76N89 1606 aa24.03■■□□□ 1.44
CALCOCO2-211ENST00000508679 FYCO1Q9BQS8 1478 aa24.01■■□□□ 1.43
CALCOCO2-211ENST00000508679 VPS8Q8N3P4 1428 aa23.99■■□□□ 1.43
CALCOCO2-211ENST00000508679 EPRSP07814 1512 aaKnown RBP23.98■■□□□ 1.43
CALCOCO2-211ENST00000508679 CDK13Q14004 1512 aaKnown RBP23.96■■□□□ 1.43
CALCOCO2-211ENST00000508679 KIF13AQ9H1H9 1805 aa23.94■■□□□ 1.42
CALCOCO2-211ENST00000508679 ASXL2Q76L83 1435 aa23.94■■□□□ 1.42
CALCOCO2-211ENST00000508679 NPM1P06748 294 aaKnown RBP eCLIP23.91■■□□□ 1.42
CALCOCO2-211ENST00000508679 DIP2BQ9P265 1576 aa23.89■■□□□ 1.42
CALCOCO2-211ENST00000508679 ABCC10Q5T3U5 1492 aa23.88■■□□□ 1.41
CALCOCO2-211ENST00000508679 WDR7Q9Y4E6 1490 aa23.88■■□□□ 1.41
CALCOCO2-211ENST00000508679 ARID3CA6NKF2 412 aa23.88■■□□□ 1.41
CALCOCO2-211ENST00000508679 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
CALCOCO2-211ENST00000508679 MAGI3Q5TCQ9 1506 aa23.85■■□□□ 1.41
CALCOCO2-211ENST00000508679 CFAP43Q8NDM7 1665 aa23.84■■□□□ 1.41
CALCOCO2-211ENST00000508679 GLI2P10070 1586 aa23.84■■□□□ 1.41
CALCOCO2-211ENST00000508679 MAP3K1Q13233 1512 aa23.8■■□□□ 1.4
CALCOCO2-211ENST00000508679 TIAM1Q13009 1591 aa23.8■■□□□ 1.4
CALCOCO2-211ENST00000508679 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
CALCOCO2-211ENST00000508679 MAP3K4Q9Y6R4 1608 aa23.76■■□□□ 1.39
CALCOCO2-211ENST00000508679 ABCA9Q8IUA7 1624 aa23.75■■□□□ 1.39
CALCOCO2-211ENST00000508679 TROQ12816 1431 aaPredicted RBP23.75■■□□□ 1.39
CALCOCO2-211ENST00000508679 PLEKHD1A6NEE1 506 aa23.74■■□□□ 1.39
CALCOCO2-211ENST00000508679 PPRC1Q5VV67 1664 aaKnown RBP23.74■■□□□ 1.39
CALCOCO2-211ENST00000508679 KIF14Q15058 1648 aa23.73■■□□□ 1.39
CALCOCO2-211ENST00000508679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
CALCOCO2-211ENST00000508679 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
CALCOCO2-211ENST00000508679 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.71■■□□□ 1.39
CALCOCO2-211ENST00000508679 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
CALCOCO2-211ENST00000508679 TTC37Q6PGP7 1564 aa23.68■■□□□ 1.38
CALCOCO2-211ENST00000508679 KCNH8Q96L42 1107 aa23.67■■□□□ 1.38
CALCOCO2-211ENST00000508679 CDK11AQ9UQ88 783 aaPredicted RBP23.67■■□□□ 1.38
CALCOCO2-211ENST00000508679 LRRC9Q6ZRR7 1453 aa23.66■■□□□ 1.38
CALCOCO2-211ENST00000508679 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
CALCOCO2-211ENST00000508679 TSPOAP1O95153 1857 aa23.64■■□□□ 1.37
CALCOCO2-211ENST00000508679 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.37
CALCOCO2-211ENST00000508679 KANK4Q5T7N3 995 aaPredicted RBP23.63■■□□□ 1.37
CALCOCO2-211ENST00000508679 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
CALCOCO2-211ENST00000508679 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
CALCOCO2-211ENST00000508679 MTUS2Q5JR59 1369 aa23.59■■□□□ 1.37
CALCOCO2-211ENST00000508679 MYO5CQ9NQX4 1742 aa23.58■■□□□ 1.36
CALCOCO2-211ENST00000508679 CDC42BPBQ9Y5S2 1711 aa23.58■■□□□ 1.36
CALCOCO2-211ENST00000508679 SUPT6HQ7KZ85 1726 aaKnown RBP23.57■■□□□ 1.36
CALCOCO2-211ENST00000508679 ARAP3Q8WWN8 1544 aa23.55■■□□□ 1.36
CALCOCO2-211ENST00000508679 PREX2Q70Z35 1606 aa23.54■■□□□ 1.36
CALCOCO2-211ENST00000508679 PLCH2O75038 1416 aa23.53■■□□□ 1.36
CALCOCO2-211ENST00000508679 NCOA2Q15596 1464 aa23.53■■□□□ 1.36
CALCOCO2-211ENST00000508679 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
CALCOCO2-211ENST00000508679 TEX14Q8IWB6 1497 aa23.46■■□□□ 1.35
CALCOCO2-211ENST00000508679 APLP2Q06481 763 aa23.45■■□□□ 1.34
CALCOCO2-211ENST00000508679 NEO1Q92859 1461 aa23.45■■□□□ 1.34
CALCOCO2-211ENST00000508679 ITSN2Q9NZM3 1697 aa23.44■■□□□ 1.34
CALCOCO2-211ENST00000508679 COL17A1Q9UMD9 1497 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms