RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 NISCHQ9Y2I1 1504 aa36.12■■■■□ 3.37
CALCOCO2-211ENST00000508679 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
CALCOCO2-211ENST00000508679 ABCC9O60706 1549 aa30.81■■■□□ 2.52
CALCOCO2-211ENST00000508679 ZCCHC6Q5VYS8 1495 aaKnown RBP30.18■■■□□ 2.42
CALCOCO2-211ENST00000508679 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
CALCOCO2-211ENST00000508679 MYO15BQ96JP2 1530 aa29.93■■■□□ 2.38
CALCOCO2-211ENST00000508679 NACADO15069 1562 aa29.92■■■□□ 2.38
CALCOCO2-211ENST00000508679 RB1CC1Q8TDY2 1594 aa29.83■■■□□ 2.37
CALCOCO2-211ENST00000508679 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
CALCOCO2-211ENST00000508679 UNC13AQ9UPW8 1703 aa29.35■■■□□ 2.29
CALCOCO2-211ENST00000508679 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
CALCOCO2-211ENST00000508679 BICRAQ9NZM4 1560 aa29.07■■■□□ 2.24
CALCOCO2-211ENST00000508679 PABPN1Q86U42 306 aaKnown RBP eCLIP28.81■■■□□ 2.2
CALCOCO2-211ENST00000508679 SHROOM4Q9ULL8 1493 aa28.69■■■□□ 2.18
CALCOCO2-211ENST00000508679 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
CALCOCO2-211ENST00000508679 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
CALCOCO2-211ENST00000508679 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
CALCOCO2-211ENST00000508679 CC2D2AQ9P2K1 1620 aa27.97■■■□□ 2.07
CALCOCO2-211ENST00000508679 SMARCA4P51532 1647 aa27.95■■■□□ 2.07
CALCOCO2-211ENST00000508679 BAZ1AQ9NRL2 1556 aaPredicted RBP27.92■■■□□ 2.06
CALCOCO2-211ENST00000508679 MROH2BQ7Z745 1585 aa27.85■■■□□ 2.05
CALCOCO2-211ENST00000508679 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
CALCOCO2-211ENST00000508679 ATAD2BQ9ULI0 1458 aa27.69■■■□□ 2.02
CALCOCO2-211ENST00000508679 RSF1Q96T23 1441 aaPredicted RBP27.64■■■□□ 2.02
CALCOCO2-211ENST00000508679 NCAPD3P42695 1498 aa27.63■■■□□ 2.01
CALCOCO2-211ENST00000508679 SMARCA2P51531 1590 aa27.62■■■□□ 2.01
CALCOCO2-211ENST00000508679 WIZO95785 1651 aa27.58■■■□□ 2.01
CALCOCO2-211ENST00000508679 HMGXB3Q12766 1538 aa27.52■■■□□ 2
CALCOCO2-211ENST00000508679 BAZ1BQ9UIG0 1483 aaKnown RBP27.4■■□□□ 1.98
CALCOCO2-211ENST00000508679 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
CALCOCO2-211ENST00000508679 SUPT5HO00267 1087 aaKnown RBP27.02■■□□□ 1.92
CALCOCO2-211ENST00000508679 CCDC88BA6NC98 1476 aa26.95■■□□□ 1.9
CALCOCO2-211ENST00000508679 NESP48681 1621 aa26.84■■□□□ 1.89
CALCOCO2-211ENST00000508679 LAMC3Q9Y6N6 1575 aa26.81■■□□□ 1.88
CALCOCO2-211ENST00000508679 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
CALCOCO2-211ENST00000508679 CFTRP13569 1480 aa26.76■■□□□ 1.87
CALCOCO2-211ENST00000508679 PRDM2Q13029 1718 aa26.66■■□□□ 1.86
CALCOCO2-211ENST00000508679 KIF21AQ7Z4S6 1674 aa26.58■■□□□ 1.85
CALCOCO2-211ENST00000508679 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
CALCOCO2-211ENST00000508679 FANCD2Q9BXW9 1451 aa26.47■■□□□ 1.83
CALCOCO2-211ENST00000508679 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
CALCOCO2-211ENST00000508679 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
CALCOCO2-211ENST00000508679 CEP164Q9UPV0 1460 aa26.37■■□□□ 1.81
CALCOCO2-211ENST00000508679 MRC2Q9UBG0 1479 aa26.28■■□□□ 1.8
CALCOCO2-211ENST00000508679 WDR62O43379 1518 aa26.26■■□□□ 1.79
CALCOCO2-211ENST00000508679 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
CALCOCO2-211ENST00000508679 CUX2O14529 1486 aa26.13■■□□□ 1.77
CALCOCO2-211ENST00000508679 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
CALCOCO2-211ENST00000508679 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
CALCOCO2-211ENST00000508679 CUX1P39880 1505 aa26.1■■□□□ 1.77
CALCOCO2-211ENST00000508679 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
CALCOCO2-211ENST00000508679 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
CALCOCO2-211ENST00000508679 SYNJ1O43426 1573 aa26■■□□□ 1.75
CALCOCO2-211ENST00000508679 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
CALCOCO2-211ENST00000508679 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
CALCOCO2-211ENST00000508679 POLA1P09884 1462 aaPredicted RBP25.93■■□□□ 1.74
CALCOCO2-211ENST00000508679 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
CALCOCO2-211ENST00000508679 TARBP1Q13395 1621 aaKnown RBP25.89■■□□□ 1.74
CALCOCO2-211ENST00000508679 IFT140Q96RY7 1462 aa25.83■■□□□ 1.72
CALCOCO2-211ENST00000508679 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
CALCOCO2-211ENST00000508679 WDR97A6NE52 1622 aa25.8■■□□□ 1.72
CALCOCO2-211ENST00000508679 SOGA1O94964 1423 aa25.76■■□□□ 1.71
CALCOCO2-211ENST00000508679 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
CALCOCO2-211ENST00000508679 ABCA10Q8WWZ4 1543 aa25.7■■□□□ 1.7
CALCOCO2-211ENST00000508679 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
CALCOCO2-211ENST00000508679 ABCA5Q8WWZ7 1642 aa25.61■■□□□ 1.69
CALCOCO2-211ENST00000508679 AQRO60306 1485 aaKnown RBP eCLIP25.59■■□□□ 1.691e-6■■■■□ 26.1
CALCOCO2-211ENST00000508679 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
CALCOCO2-211ENST00000508679 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
CALCOCO2-211ENST00000508679 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
CALCOCO2-211ENST00000508679 PBRM1Q86U86 1689 aa25.49■■□□□ 1.67
CALCOCO2-211ENST00000508679 GAPVD1Q14C86 1478 aa25.49■■□□□ 1.67
CALCOCO2-211ENST00000508679 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
CALCOCO2-211ENST00000508679 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
CALCOCO2-211ENST00000508679 ERICH3Q5RHP9 1530 aa25.38■■□□□ 1.65
CALCOCO2-211ENST00000508679 KIF27Q86VH2 1401 aa25.37■■□□□ 1.65
CALCOCO2-211ENST00000508679 SNAPC4Q5SXM2 1469 aa25.35■■□□□ 1.65
CALCOCO2-211ENST00000508679 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
CALCOCO2-211ENST00000508679 IGF1RP08069 1367 aa25.31■■□□□ 1.64
CALCOCO2-211ENST00000508679 ADAMTS12P58397 1594 aa25.3■■□□□ 1.64
CALCOCO2-211ENST00000508679 CHD1O14646 1710 aa25.29■■□□□ 1.64
CALCOCO2-211ENST00000508679 SYNJ2O15056 1496 aa25.24■■□□□ 1.63
CALCOCO2-211ENST00000508679 CUL7Q14999 1698 aa25.22■■□□□ 1.63
CALCOCO2-211ENST00000508679 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
CALCOCO2-211ENST00000508679 EEA1Q15075 1411 aa25.15■■□□□ 1.62
CALCOCO2-211ENST00000508679 GRIN2AQ12879 1464 aa25.13■■□□□ 1.61
CALCOCO2-211ENST00000508679 CARMIL1Q5VZK9 1371 aa25.1■■□□□ 1.61
CALCOCO2-211ENST00000508679 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
CALCOCO2-211ENST00000508679 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
CALCOCO2-211ENST00000508679 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
CALCOCO2-211ENST00000508679 NUP160Q12769 1436 aa25.05■■□□□ 1.6
CALCOCO2-211ENST00000508679 CSRNP3Q8WYN3 585 aa25.05■■□□□ 1.6
CALCOCO2-211ENST00000508679 CLASP1Q7Z460 1538 aa25.03■■□□□ 1.6
CALCOCO2-211ENST00000508679 FBLN2P98095 1184 aa25.03■■□□□ 1.6
CALCOCO2-211ENST00000508679 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
CALCOCO2-211ENST00000508679 RAPGEF2Q9Y4G8 1499 aa25.01■■□□□ 1.59
CALCOCO2-211ENST00000508679 KIF21BO75037 1637 aa24.95■■□□□ 1.58
CALCOCO2-211ENST00000508679 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
CALCOCO2-211ENST00000508679 DNAJC5Q9H3Z4 198 aa24.89■■□□□ 1.57
CALCOCO2-211ENST00000508679 SHROOM2Q13796 1616 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms