RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
UBE2D3-222ENST00000508238 FBLN2P98095 1184 aa14.06□□□□□ -0.16
UBE2D3-222ENST00000508238 WRNQ14191 1432 aaPredicted RBP eCLIP14.05□□□□□ -0.165e-6■■■■■ 29.2
UBE2D3-222ENST00000508238 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
UBE2D3-222ENST00000508238 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-222ENST00000508238 GAPVD1Q14C86 1478 aa14.04□□□□□ -0.16
UBE2D3-222ENST00000508238 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
UBE2D3-222ENST00000508238 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
UBE2D3-222ENST00000508238 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
UBE2D3-222ENST00000508238 CHMP7Q8WUX9 453 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3-222ENST00000508238 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
UBE2D3-222ENST00000508238 TOP2BQ02880 1626 aa14.03□□□□□ -0.16
UBE2D3-222ENST00000508238 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
UBE2D3-222ENST00000508238 SYNJ2O15056 1496 aa14.01□□□□□ -0.17
UBE2D3-222ENST00000508238 U3KPZ7 1027 aaPredicted RBP14.01□□□□□ -0.17
UBE2D3-222ENST00000508238 ABCA5Q8WWZ7 1642 aa13.99□□□□□ -0.17
UBE2D3-222ENST00000508238 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
UBE2D3-222ENST00000508238 PBRM1Q86U86 1689 aa13.96□□□□□ -0.17
UBE2D3-222ENST00000508238 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
UBE2D3-222ENST00000508238 CYB5RLQ6IPT4 315 aa13.94□□□□□ -0.18
UBE2D3-222ENST00000508238 ATXN8OSP0DMR3 200 aa13.91□□□□□ -0.18
UBE2D3-222ENST00000508238 ARAP1Q96P48 1450 aa13.9□□□□□ -0.18
UBE2D3-222ENST00000508238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-222ENST00000508238 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-222ENST00000508238 ERICH3Q5RHP9 1530 aa13.89□□□□□ -0.19
UBE2D3-222ENST00000508238 FHAD1B1AJZ9 1412 aa13.89□□□□□ -0.19
UBE2D3-222ENST00000508238 GRIN2AQ12879 1464 aa13.87□□□□□ -0.19
UBE2D3-222ENST00000508238 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
UBE2D3-222ENST00000508238 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-222ENST00000508238 NUP160Q12769 1436 aa13.85□□□□□ -0.19
UBE2D3-222ENST00000508238 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
UBE2D3-222ENST00000508238 IGF1RP08069 1367 aa13.79□□□□□ -0.2
UBE2D3-222ENST00000508238 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
UBE2D3-222ENST00000508238 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-222ENST00000508238 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
UBE2D3-222ENST00000508238 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
UBE2D3-222ENST00000508238 ERCC6L2Q5T890 1561 aa13.71□□□□□ -0.21
UBE2D3-222ENST00000508238 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-222ENST00000508238 APLP2Q06481 763 aa13.69□□□□□ -0.22
UBE2D3-222ENST00000508238 CUL7Q14999 1698 aa13.69□□□□□ -0.22
UBE2D3-222ENST00000508238 PRG4Q92954 1404 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-222ENST00000508238 KIAA0586Q9BVV6 1533 aa13.67□□□□□ -0.22
UBE2D3-222ENST00000508238 CARMIL1Q5VZK9 1371 aa13.67□□□□□ -0.22
UBE2D3-222ENST00000508238 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
UBE2D3-222ENST00000508238 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-222ENST00000508238 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
UBE2D3-222ENST00000508238 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-222ENST00000508238 CAPN15O75808 1086 aa13.52□□□□□ -0.25
UBE2D3-222ENST00000508238 CARMIL2Q6F5E8 1435 aa13.52□□□□□ -0.25
UBE2D3-222ENST00000508238 IQGAP2Q13576 1575 aa13.51□□□□□ -0.25
UBE2D3-222ENST00000508238 PTPRGP23470 1445 aa13.51□□□□□ -0.25
UBE2D3-222ENST00000508238 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBE2D3-222ENST00000508238 TNIKQ9UKE5 1360 aa13.49□□□□□ -0.25
UBE2D3-222ENST00000508238 ADCY10Q96PN6 1610 aa13.48□□□□□ -0.25
UBE2D3-222ENST00000508238 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
UBE2D3-222ENST00000508238 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
UBE2D3-222ENST00000508238 UGGT2Q9NYU1 1516 aa13.47□□□□□ -0.25
UBE2D3-222ENST00000508238 DISP1Q96F81 1524 aa13.46□□□□□ -0.25
UBE2D3-222ENST00000508238 ABCC10Q5T3U5 1492 aa13.45□□□□□ -0.26
UBE2D3-222ENST00000508238 KIF13AQ9H1H9 1805 aa13.45□□□□□ -0.26
UBE2D3-222ENST00000508238 UHRF1BP1LA0JNW5 1464 aa13.42□□□□□ -0.26
UBE2D3-222ENST00000508238 FAM69CQ0P6D2 419 aa13.42□□□□□ -0.26
UBE2D3-222ENST00000508238 ABCC2Q92887 1545 aa13.41□□□□□ -0.26
UBE2D3-222ENST00000508238 UACAQ9BZF9 1416 aa13.4□□□□□ -0.26
UBE2D3-222ENST00000508238 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-222ENST00000508238 CTTNBP2Q8WZ74 1663 aa13.38□□□□□ -0.27
UBE2D3-222ENST00000508238 KIAA0556O60303 1618 aa13.38□□□□□ -0.27
UBE2D3-222ENST00000508238 EEA1Q15075 1411 aa13.38□□□□□ -0.27
UBE2D3-222ENST00000508238 DIP2BQ9P265 1576 aa13.37□□□□□ -0.27
UBE2D3-222ENST00000508238 GOLGA3Q08378 1498 aa13.37□□□□□ -0.27
UBE2D3-222ENST00000508238 PLB1Q6P1J6 1458 aa13.36□□□□□ -0.27
UBE2D3-222ENST00000508238 KDM5BQ9UGL1 1544 aa13.35□□□□□ -0.27
UBE2D3-222ENST00000508238 ASXL2Q76L83 1435 aa13.34□□□□□ -0.27
UBE2D3-222ENST00000508238 POLA2Q14181 598 aa13.34□□□□□ -0.27
UBE2D3-222ENST00000508238 GLI2P10070 1586 aa13.3□□□□□ -0.28
UBE2D3-222ENST00000508238 ABCB7O75027 752 aa13.28□□□□□ -0.28
UBE2D3-222ENST00000508238 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-222ENST00000508238 ABCA8O94911 1581 aa13.28□□□□□ -0.28
UBE2D3-222ENST00000508238 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
UBE2D3-222ENST00000508238 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-222ENST00000508238 ZCCHC11Q5TAX3 1644 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-222ENST00000508238 DSG3P32926 999 aa13.25□□□□□ -0.29
UBE2D3-222ENST00000508238 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
UBE2D3-222ENST00000508238 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
UBE2D3-222ENST00000508238 FKBP8Q14318 412 aa13.23□□□□□ -0.29
UBE2D3-222ENST00000508238 KIF21BO75037 1637 aa13.22□□□□□ -0.29
UBE2D3-222ENST00000508238 P3H3Q8IVL6 736 aa13.22□□□□□ -0.29
UBE2D3-222ENST00000508238 PPRC1Q5VV67 1664 aaKnown RBP13.21□□□□□ -0.3
UBE2D3-222ENST00000508238 KDM6BO15054 1643 aa13.21□□□□□ -0.3
UBE2D3-222ENST00000508238 MAP3K4Q9Y6R4 1608 aa13.2□□□□□ -0.3
UBE2D3-222ENST00000508238 ATP10BO94823 1461 aa13.18□□□□□ -0.3
UBE2D3-222ENST00000508238 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-222ENST00000508238 TEX14Q8IWB6 1497 aa13.17□□□□□ -0.3
UBE2D3-222ENST00000508238 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
UBE2D3-222ENST00000508238 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
UBE2D3-222ENST00000508238 EFCAB5A4FU69 1503 aa13.14□□□□□ -0.31
UBE2D3-222ENST00000508238 MAGI3Q5TCQ9 1506 aa13.14□□□□□ -0.31
UBE2D3-222ENST00000508238 POTEHQ6S545 545 aa13.14□□□□□ -0.31
UBE2D3-222ENST00000508238 COL17A1Q9UMD9 1497 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-222ENST00000508238 RAPGEF6Q8TEU7 1601 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms