RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 UBTFP17480 764 aaKnown RBP33.94■■■■□ 3.02
HOXC9-203ENST00000508190 CLASP1Q7Z460 1538 aa33.92■■■■□ 3.02
HOXC9-203ENST00000508190 OSCARQ8IYS5 282 aa33.89■■■■□ 3.02
HOXC9-203ENST00000508190 KIAA0586Q9BVV6 1533 aa33.88■■■■□ 3.01
HOXC9-203ENST00000508190 IQGAP2Q13576 1575 aa33.87■■■■□ 3.01
HOXC9-203ENST00000508190 TNIKQ9UKE5 1360 aa33.79■■■■□ 3
HOXC9-203ENST00000508190 SHROOM2Q13796 1616 aa33.76■■■□□ 2.99
HOXC9-203ENST00000508190 RANGAP1P46060 587 aaPredicted RBP33.69■■■□□ 2.98
HOXC9-203ENST00000508190 UGGT2Q9NYU1 1516 aa33.68■■■□□ 2.98
HOXC9-203ENST00000508190 JPH4Q96JJ6 628 aa33.65■■■□□ 2.98
HOXC9-203ENST00000508190 SAMD9Q5K651 1589 aa33.6■■■□□ 2.97
HOXC9-203ENST00000508190 ERCC6L2Q5T890 1561 aa33.6■■■□□ 2.97
HOXC9-203ENST00000508190 CEP162Q5TB80 1403 aa33.58■■■□□ 2.97
HOXC9-203ENST00000508190 PRG4Q92954 1404 aaPredicted RBP33.57■■■□□ 2.97
HOXC9-203ENST00000508190 KIAA0556O60303 1618 aa33.57■■■□□ 2.96
HOXC9-203ENST00000508190 DISP1Q96F81 1524 aa33.57■■■□□ 2.96
HOXC9-203ENST00000508190 EFCAB5A4FU69 1503 aa33.52■■■□□ 2.96
HOXC9-203ENST00000508190 CLIP1P30622 1438 aa33.52■■■□□ 2.96
HOXC9-203ENST00000508190 ARHGAP35Q9NRY4 1499 aa33.51■■■□□ 2.96
HOXC9-203ENST00000508190 CARMIL2Q6F5E8 1435 aa33.46■■■□□ 2.95
HOXC9-203ENST00000508190 P3H3Q8IVL6 736 aa33.46■■■□□ 2.95
HOXC9-203ENST00000508190 ARHGEF11O15085 1522 aa33.45■■■□□ 2.94
HOXC9-203ENST00000508190 RIMBP3CA6NJZ7 1639 aa33.43■■■□□ 2.94
HOXC9-203ENST00000508190 RIMBP3BA6NNM3 1639 aa33.43■■■□□ 2.94
HOXC9-203ENST00000508190 RIMBP3Q9UFD9 1639 aa33.43■■■□□ 2.94
HOXC9-203ENST00000508190 FHOD3Q2V2M9 1422 aa33.42■■■□□ 2.94
HOXC9-203ENST00000508190 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
HOXC9-203ENST00000508190 TTBK1Q5TCY1 1321 aaPredicted RBP33.32■■■□□ 2.92
HOXC9-203ENST00000508190 PTPRGP23470 1445 aa33.24■■■□□ 2.91
HOXC9-203ENST00000508190 DNAJC5Q9H3Z4 198 aa33.23■■■□□ 2.91
HOXC9-203ENST00000508190 FMN1Q68DA7 1419 aa33.16■■■□□ 2.9
HOXC9-203ENST00000508190 PCF11O94913 1555 aaKnown RBP33.14■■■□□ 2.9
HOXC9-203ENST00000508190 PLB1Q6P1J6 1458 aa33.14■■■□□ 2.9
HOXC9-203ENST00000508190 RAPGEF6Q8TEU7 1601 aa33.13■■■□□ 2.89
HOXC9-203ENST00000508190 ABCA8O94911 1581 aa33.12■■■□□ 2.89
HOXC9-203ENST00000508190 VPS8Q8N3P4 1428 aa33.1■■■□□ 2.89
HOXC9-203ENST00000508190 ADCY10Q96PN6 1610 aa33.06■■■□□ 2.88
HOXC9-203ENST00000508190 CYB5RLQ6IPT4 315 aa33.05■■■□□ 2.88
HOXC9-203ENST00000508190 UACAQ9BZF9 1416 aa33.05■■■□□ 2.88
HOXC9-203ENST00000508190 LRRIQ1Q96JM4 1722 aa33.05■■■□□ 2.88
HOXC9-203ENST00000508190 ABCC2Q92887 1545 aa33.02■■■□□ 2.88
HOXC9-203ENST00000508190 CASKIN1Q8WXD9 1431 aa33.01■■■□□ 2.88
HOXC9-203ENST00000508190 HECW1Q76N89 1606 aa33.01■■■□□ 2.87
HOXC9-203ENST00000508190 FYCO1Q9BQS8 1478 aa33■■■□□ 2.87
HOXC9-203ENST00000508190 UHRF1BP1LA0JNW5 1464 aa32.97■■■□□ 2.87
HOXC9-203ENST00000508190 NUP153P49790 1475 aaKnown RBP32.97■■■□□ 2.87
HOXC9-203ENST00000508190 ATP1B4Q9UN42 357 aaPredicted RBP32.95■■■□□ 2.87
HOXC9-203ENST00000508190 ARID3CA6NKF2 412 aa32.91■■■□□ 2.86
HOXC9-203ENST00000508190 ZCCHC11Q5TAX3 1644 aaKnown RBP32.88■■■□□ 2.85
HOXC9-203ENST00000508190 CDK13Q14004 1512 aaKnown RBP32.87■■■□□ 2.85
HOXC9-203ENST00000508190 EPRSP07814 1512 aaKnown RBP32.86■■■□□ 2.85
HOXC9-203ENST00000508190 CFAP43Q8NDM7 1665 aa32.83■■■□□ 2.85
HOXC9-203ENST00000508190 KDM5BQ9UGL1 1544 aa32.83■■■□□ 2.85
HOXC9-203ENST00000508190 ATP10BO94823 1461 aa32.82■■■□□ 2.84
HOXC9-203ENST00000508190 CCDC18Q5T9S5 1454 aa32.8■■■□□ 2.84
HOXC9-203ENST00000508190 TIAM1Q13009 1591 aa32.77■■■□□ 2.84
HOXC9-203ENST00000508190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.72■■■□□ 2.83
HOXC9-203ENST00000508190 HNRNPUL2Q1KMD3 747 aaKnown RBP32.72■■■□□ 2.83
HOXC9-203ENST00000508190 MAP3K1Q13233 1512 aa32.69■■■□□ 2.82
HOXC9-203ENST00000508190 NPM1P06748 294 aaKnown RBP eCLIP32.68■■■□□ 2.82
HOXC9-203ENST00000508190 MAGI3Q5TCQ9 1506 aa32.67■■■□□ 2.82
HOXC9-203ENST00000508190 APLP2Q06481 763 aa32.65■■■□□ 2.82
HOXC9-203ENST00000508190 MAPKBP1O60336 1514 aa32.62■■■□□ 2.81
HOXC9-203ENST00000508190 ASXL2Q76L83 1435 aa32.6■■■□□ 2.81
HOXC9-203ENST00000508190 LRRC9Q6ZRR7 1453 aa32.56■■■□□ 2.8
HOXC9-203ENST00000508190 KANK4Q5T7N3 995 aaPredicted RBP32.56■■■□□ 2.8
HOXC9-203ENST00000508190 EHBP1L1Q8N3D4 1523 aa32.55■■■□□ 2.8
HOXC9-203ENST00000508190 WDR7Q9Y4E6 1490 aa32.55■■■□□ 2.8
HOXC9-203ENST00000508190 CDK11AQ9UQ88 783 aaPredicted RBP32.54■■■□□ 2.8
HOXC9-203ENST00000508190 TROQ12816 1431 aaPredicted RBP32.53■■■□□ 2.8
HOXC9-203ENST00000508190 PLEKHD1A6NEE1 506 aa32.53■■■□□ 2.8
HOXC9-203ENST00000508190 MTUS2Q5JR59 1369 aa32.53■■■□□ 2.8
HOXC9-203ENST00000508190 KIF14Q15058 1648 aa32.52■■■□□ 2.8
HOXC9-203ENST00000508190 PPARGC1BQ86YN6 1023 aaKnown RBP32.51■■■□□ 2.79
HOXC9-203ENST00000508190 SUPT6HQ7KZ85 1726 aaKnown RBP32.47■■■□□ 2.79
HOXC9-203ENST00000508190 KCNH8Q96L42 1107 aa32.44■■■□□ 2.78
HOXC9-203ENST00000508190 KIF13AQ9H1H9 1805 aa32.41■■■□□ 2.78
HOXC9-203ENST00000508190 DIP2BQ9P265 1576 aa32.4■■■□□ 2.78
HOXC9-203ENST00000508190 TTC37Q6PGP7 1564 aa32.39■■■□□ 2.78
HOXC9-203ENST00000508190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.37■■■□□ 2.77
HOXC9-203ENST00000508190 NCOA2Q15596 1464 aa32.36■■■□□ 2.77
HOXC9-203ENST00000508190 ABCC10Q5T3U5 1492 aa32.35■■■□□ 2.77
HOXC9-203ENST00000508190 ABCA9Q8IUA7 1624 aa32.35■■■□□ 2.77
HOXC9-203ENST00000508190 CDC42BPAQ5VT25 1732 aa32.31■■■□□ 2.76
HOXC9-203ENST00000508190 GLI2P10070 1586 aa32.3■■■□□ 2.76
HOXC9-203ENST00000508190 MYO5CQ9NQX4 1742 aa32.29■■■□□ 2.76
HOXC9-203ENST00000508190 MAP3K4Q9Y6R4 1608 aa32.27■■■□□ 2.76
HOXC9-203ENST00000508190 CDC42BPBQ9Y5S2 1711 aa32.24■■■□□ 2.75
HOXC9-203ENST00000508190 FAM69CQ0P6D2 419 aa32.24■■■□□ 2.75
HOXC9-203ENST00000508190 TSPOAP1O95153 1857 aa32.24■■■□□ 2.75
HOXC9-203ENST00000508190 ITSN2Q9NZM3 1697 aa32.23■■■□□ 2.75
HOXC9-203ENST00000508190 PREX2Q70Z35 1606 aa32.22■■■□□ 2.75
HOXC9-203ENST00000508190 PHLDB1Q86UU1 1377 aa32.22■■■□□ 2.75
HOXC9-203ENST00000508190 CCNB3Q8WWL7 1395 aa32.2■■■□□ 2.74
HOXC9-203ENST00000508190 GPATCH8Q9UKJ3 1502 aaKnown RBP32.18■■■□□ 2.74
HOXC9-203ENST00000508190 PPRC1Q5VV67 1664 aaKnown RBP32.16■■■□□ 2.74
HOXC9-203ENST00000508190 CD109Q6YHK3 1445 aa32.15■■■□□ 2.74
HOXC9-203ENST00000508190 MYOM3Q5VTT5 1437 aa32.14■■■□□ 2.74
HOXC9-203ENST00000508190 TRHP20396 242 aaPredicted RBP32.11■■■□□ 2.73
HOXC9-203ENST00000508190 PLCH2O75038 1416 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms