RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 NISCHQ9Y2I1 1504 aa49.27■■■■■ 5.48
HOXC9-203ENST00000508190 CCDC180Q9P1Z9 1646 aa43.51■■■■■ 4.56
HOXC9-203ENST00000508190 ABCC9O60706 1549 aa41.84■■■■■ 4.29
HOXC9-203ENST00000508190 ZCCHC6Q5VYS8 1495 aaKnown RBP41.22■■■■■ 4.19
HOXC9-203ENST00000508190 DCAF8L2P0C7V8 631 aa40.85■■■■■ 4.13
HOXC9-203ENST00000508190 DCAF1Q9Y4B6 1507 aa40.74■■■■■ 4.11
HOXC9-203ENST00000508190 NACADO15069 1562 aa40.65■■■■■ 4.1
HOXC9-203ENST00000508190 MYO15BQ96JP2 1530 aa40.6■■■■■ 4.09
HOXC9-203ENST00000508190 RB1CC1Q8TDY2 1594 aa40.53■■■■■ 4.08
HOXC9-203ENST00000508190 UNC13AQ9UPW8 1703 aa39.85■■■■□ 3.97
HOXC9-203ENST00000508190 SCRIBQ14160 1630 aa39.83■■■■□ 3.97
HOXC9-203ENST00000508190 SHROOM4Q9ULL8 1493 aa39.48■■■■□ 3.91
HOXC9-203ENST00000508190 BICRAQ9NZM4 1560 aa39.36■■■■□ 3.89
HOXC9-203ENST00000508190 PABPN1Q86U42 306 aaKnown RBP eCLIP39.2■■■■□ 3.87
HOXC9-203ENST00000508190 CECR2Q9BXF3 1484 aa38.35■■■■□ 3.73
HOXC9-203ENST00000508190 EIF4G1Q04637 1599 aaKnown RBP38.22■■■■□ 3.71
HOXC9-203ENST00000508190 SMARCA4P51532 1647 aa38.13■■■■□ 3.69
HOXC9-203ENST00000508190 BAZ1AQ9NRL2 1556 aaPredicted RBP38.13■■■■□ 3.69
HOXC9-203ENST00000508190 MROH2BQ7Z745 1585 aa38.04■■■■□ 3.68
HOXC9-203ENST00000508190 CC2D2AQ9P2K1 1620 aa37.91■■■■□ 3.66
HOXC9-203ENST00000508190 RSF1Q96T23 1441 aaPredicted RBP37.82■■■■□ 3.65
HOXC9-203ENST00000508190 WIZO95785 1651 aa37.73■■■■□ 3.63
HOXC9-203ENST00000508190 DNAJC5BQ9UF47 199 aa37.68■■■■□ 3.62
HOXC9-203ENST00000508190 PEG3Q9GZU2 1588 aa37.68■■■■□ 3.62
HOXC9-203ENST00000508190 ATAD2BQ9ULI0 1458 aa37.65■■■■□ 3.62
HOXC9-203ENST00000508190 SMARCA2P51531 1590 aa37.64■■■■□ 3.62
HOXC9-203ENST00000508190 SUPT5HO00267 1087 aaKnown RBP37.47■■■■□ 3.59
HOXC9-203ENST00000508190 NCAPD3P42695 1498 aa37.46■■■■□ 3.59
HOXC9-203ENST00000508190 HMGXB3Q12766 1538 aa37.4■■■■□ 3.58
HOXC9-203ENST00000508190 BAZ1BQ9UIG0 1483 aaKnown RBP37.4■■■■□ 3.58
HOXC9-203ENST00000508190 TOP2AP11388 1531 aaKnown RBP37.29■■■■□ 3.56
HOXC9-203ENST00000508190 CCDC88BA6NC98 1476 aa36.84■■■■□ 3.49
HOXC9-203ENST00000508190 NESP48681 1621 aa36.47■■■■□ 3.43
HOXC9-203ENST00000508190 CADPSQ9ULU8 1353 aa36.41■■■■□ 3.42
HOXC9-203ENST00000508190 LAMC3Q9Y6N6 1575 aa36.41■■■■□ 3.42
HOXC9-203ENST00000508190 CFTRP13569 1480 aa36.39■■■■□ 3.42
HOXC9-203ENST00000508190 PRDM2Q13029 1718 aa36.37■■■■□ 3.41
HOXC9-203ENST00000508190 KIF21AQ7Z4S6 1674 aa36.14■■■■□ 3.38
HOXC9-203ENST00000508190 PDS5BQ9NTI5 1447 aa36.07■■■■□ 3.36
HOXC9-203ENST00000508190 FANCD2Q9BXW9 1451 aa36.06■■■■□ 3.36
HOXC9-203ENST00000508190 ERCC6Q03468 1493 aa35.95■■■■□ 3.35
HOXC9-203ENST00000508190 CEP164Q9UPV0 1460 aa35.94■■■■□ 3.34
HOXC9-203ENST00000508190 ABCC8Q09428 1581 aa35.82■■■■□ 3.32
HOXC9-203ENST00000508190 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.31
HOXC9-203ENST00000508190 MRC2Q9UBG0 1479 aa35.72■■■■□ 3.31
HOXC9-203ENST00000508190 URB2Q14146 1524 aaKnown RBP35.69■■■■□ 3.3
HOXC9-203ENST00000508190 CUX1P39880 1505 aa35.64■■■■□ 3.3
HOXC9-203ENST00000508190 WRNQ14191 1432 aaPredicted RBP eCLIP35.63■■■■□ 3.29
HOXC9-203ENST00000508190 DNMBPQ6XZF7 1577 aa35.62■■■■□ 3.29
HOXC9-203ENST00000508190 SYNJ1O43426 1573 aa35.61■■■■□ 3.29
HOXC9-203ENST00000508190 WDR62O43379 1518 aa35.6■■■■□ 3.29
HOXC9-203ENST00000508190 TOPBP1Q92547 1522 aa35.59■■■■□ 3.29
HOXC9-203ENST00000508190 BIVM-ERCC5R4GMW8 1640 aa35.55■■■■□ 3.28
HOXC9-203ENST00000508190 TOP2BQ02880 1626 aa35.53■■■■□ 3.28
HOXC9-203ENST00000508190 CHIC1Q5VXU3 224 aa35.4■■■■□ 3.26
HOXC9-203ENST00000508190 FGD5Q6ZNL6 1462 aa35.38■■■■□ 3.25
HOXC9-203ENST00000508190 POLA1P09884 1462 aaPredicted RBP35.33■■■■□ 3.25
HOXC9-203ENST00000508190 TRIM41Q8WV44 630 aa35.29■■■■□ 3.24
HOXC9-203ENST00000508190 CUX2O14529 1486 aa35.25■■■■□ 3.23
HOXC9-203ENST00000508190 RAD54L2Q9Y4B4 1467 aa35.2■■■■□ 3.23
HOXC9-203ENST00000508190 TARBP1Q13395 1621 aaKnown RBP35.18■■■■□ 3.22
HOXC9-203ENST00000508190 SOGA1O94964 1423 aa35.15■■■■□ 3.22
HOXC9-203ENST00000508190 WDR97A6NE52 1622 aa35.14■■■■□ 3.22
HOXC9-203ENST00000508190 IFT140Q96RY7 1462 aa35.12■■■■□ 3.21
HOXC9-203ENST00000508190 ABCA10Q8WWZ4 1543 aa35.03■■■■□ 3.2
HOXC9-203ENST00000508190 ZNF608Q9ULD9 1512 aaPredicted RBP34.98■■■■□ 3.19
HOXC9-203ENST00000508190 EIF4G3O43432 1585 aaKnown RBP34.92■■■■□ 3.18
HOXC9-203ENST00000508190 ABCA5Q8WWZ7 1642 aa34.91■■■■□ 3.18
HOXC9-203ENST00000508190 TDRD9Q8NDG6 1382 aaKnown RBP34.89■■■■□ 3.18
HOXC9-203ENST00000508190 AQRO60306 1485 aaKnown RBP eCLIP34.85■■■■□ 3.17
HOXC9-203ENST00000508190 RUSC2Q8N2Y8 1516 aa34.84■■■■□ 3.17
HOXC9-203ENST00000508190 PBRM1Q86U86 1689 aa34.82■■■■□ 3.16
HOXC9-203ENST00000508190 KIF27Q86VH2 1401 aa34.79■■■■□ 3.16
HOXC9-203ENST00000508190 GAPVD1Q14C86 1478 aa34.79■■■■□ 3.16
HOXC9-203ENST00000508190 GRIN2BQ13224 1484 aa34.65■■■■□ 3.14
HOXC9-203ENST00000508190 FAM9AQ8IZU1 332 aaPredicted RBP34.64■■■■□ 3.14
HOXC9-203ENST00000508190 ERICH3Q5RHP9 1530 aa34.62■■■■□ 3.13
HOXC9-203ENST00000508190 EEA1Q15075 1411 aa34.61■■■■□ 3.13
HOXC9-203ENST00000508190 SNAPC4Q5SXM2 1469 aa34.57■■■■□ 3.12
HOXC9-203ENST00000508190 IGF1RP08069 1367 aa34.56■■■■□ 3.12
HOXC9-203ENST00000508190 CUL7Q14999 1698 aa34.52■■■■□ 3.12
HOXC9-203ENST00000508190 ADAMTS12P58397 1594 aa34.51■■■■□ 3.12
HOXC9-203ENST00000508190 MAGI1Q96QZ7 1491 aaPredicted RBP34.48■■■■□ 3.11
HOXC9-203ENST00000508190 CSRNP3Q8WYN3 585 aa34.46■■■■□ 3.11
HOXC9-203ENST00000508190 CHD1O14646 1710 aa34.4■■■■□ 3.1
HOXC9-203ENST00000508190 CARMIL1Q5VZK9 1371 aa34.38■■■■□ 3.09
HOXC9-203ENST00000508190 FHAD1B1AJZ9 1412 aa34.38■■■■□ 3.09
HOXC9-203ENST00000508190 SYNJ2O15056 1496 aa34.35■■■■□ 3.09
HOXC9-203ENST00000508190 PRXQ9BXM0 1461 aa34.35■■■■□ 3.09
HOXC9-203ENST00000508190 KIF21BO75037 1637 aa34.31■■■■□ 3.08
HOXC9-203ENST00000508190 RAPGEF2Q9Y4G8 1499 aa34.28■■■■□ 3.08
HOXC9-203ENST00000508190 FBLN2P98095 1184 aa34.25■■■■□ 3.07
HOXC9-203ENST00000508190 GRIN2AQ12879 1464 aa34.24■■■■□ 3.07
HOXC9-203ENST00000508190 CHMP7Q8WUX9 453 aaPredicted RBP34.24■■■■□ 3.07
HOXC9-203ENST00000508190 EHMT2Q96KQ7 1210 aa34.2■■■■□ 3.06
HOXC9-203ENST00000508190 GOLGA3Q08378 1498 aa34.13■■■■□ 3.05
HOXC9-203ENST00000508190 CEP170Q5SW79 1584 aa34.1■■■■□ 3.05
HOXC9-203ENST00000508190 CTTNBP2Q8WZ74 1663 aa34.07■■■■□ 3.05
HOXC9-203ENST00000508190 NUP160Q12769 1436 aa34.03■■■■□ 3.04
HOXC9-203ENST00000508190 LOC105371045A0A1W2PR82 267 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms