RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
CLDND1-215ENST00000507874 KIAA0586Q9BVV6 1533 aa25.66■■□□□ 1.7
CLDND1-215ENST00000507874 PRG4Q92954 1404 aaPredicted RBP25.64■■□□□ 1.7
CLDND1-215ENST00000507874 RAPGEF2Q9Y4G8 1499 aa25.59■■□□□ 1.69
CLDND1-215ENST00000507874 IQGAP2Q13576 1575 aa25.51■■□□□ 1.67
CLDND1-215ENST00000507874 PRXQ9BXM0 1461 aa25.47■■□□□ 1.67
CLDND1-215ENST00000507874 TRHP20396 242 aaPredicted RBP25.41■■□□□ 1.66
CLDND1-215ENST00000507874 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
CLDND1-215ENST00000507874 CTTNBP2Q8WZ74 1663 aa25.4■■□□□ 1.66
CLDND1-215ENST00000507874 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.65
CLDND1-215ENST00000507874 EEA1Q15075 1411 aa25.38■■□□□ 1.65
CLDND1-215ENST00000507874 CARMIL2Q6F5E8 1435 aa25.36■■□□□ 1.65
CLDND1-215ENST00000507874 UGGT2Q9NYU1 1516 aa25.36■■□□□ 1.65
CLDND1-215ENST00000507874 DISP1Q96F81 1524 aa25.34■■□□□ 1.65
CLDND1-215ENST00000507874 TNIKQ9UKE5 1360 aa25.31■■□□□ 1.64
CLDND1-215ENST00000507874 ADCY10Q96PN6 1610 aa25.31■■□□□ 1.64
CLDND1-215ENST00000507874 PTPRGP23470 1445 aa25.3■■□□□ 1.64
CLDND1-215ENST00000507874 FAM9AQ8IZU1 332 aaPredicted RBP25.3■■□□□ 1.64
CLDND1-215ENST00000507874 TTBK1Q5TCY1 1321 aaPredicted RBP25.28■■□□□ 1.64
CLDND1-215ENST00000507874 KIAA0556O60303 1618 aa25.28■■□□□ 1.64
CLDND1-215ENST00000507874 NPM1P06748 294 aaKnown RBP eCLIP25.19■■□□□ 1.62
CLDND1-215ENST00000507874 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
CLDND1-215ENST00000507874 KIF21BO75037 1637 aa25.17■■□□□ 1.62
CLDND1-215ENST00000507874 MAPKBP1O60336 1514 aa25.16■■□□□ 1.62
CLDND1-215ENST00000507874 UACAQ9BZF9 1416 aa25.14■■□□□ 1.61
CLDND1-215ENST00000507874 UHRF1BP1LA0JNW5 1464 aa25.13■■□□□ 1.61
CLDND1-215ENST00000507874 KIF13AQ9H1H9 1805 aa25.12■■□□□ 1.61
CLDND1-215ENST00000507874 ABCC2Q92887 1545 aa25.11■■□□□ 1.61
CLDND1-215ENST00000507874 ABCC10Q5T3U5 1492 aa25.06■■□□□ 1.6
CLDND1-215ENST00000507874 SAMD9Q5K651 1589 aa25.05■■□□□ 1.6
CLDND1-215ENST00000507874 DIP2BQ9P265 1576 aa25.04■■□□□ 1.6
CLDND1-215ENST00000507874 PLB1Q6P1J6 1458 aa25.04■■□□□ 1.6
CLDND1-215ENST00000507874 P3H3Q8IVL6 736 aa25.03■■□□□ 1.6
CLDND1-215ENST00000507874 KDM5BQ9UGL1 1544 aa25.02■■□□□ 1.6
CLDND1-215ENST00000507874 ABCA8O94911 1581 aa25.01■■□□□ 1.59
CLDND1-215ENST00000507874 FAM69CQ0P6D2 419 aa25■■□□□ 1.59
CLDND1-215ENST00000507874 EHMT2Q96KQ7 1210 aa25■■□□□ 1.59
CLDND1-215ENST00000507874 ZCCHC11Q5TAX3 1644 aaKnown RBP24.99■■□□□ 1.59
CLDND1-215ENST00000507874 ASXL2Q76L83 1435 aa24.98■■□□□ 1.59
CLDND1-215ENST00000507874 RANGAP1P46060 587 aaPredicted RBP24.97■■□□□ 1.59
CLDND1-215ENST00000507874 UBTFP17480 764 aaKnown RBP24.93■■□□□ 1.58
CLDND1-215ENST00000507874 FHOD3Q2V2M9 1422 aa24.89■■□□□ 1.58
CLDND1-215ENST00000507874 EFCAB5A4FU69 1503 aa24.88■■□□□ 1.57
CLDND1-215ENST00000507874 GLI2P10070 1586 aa24.85■■□□□ 1.57
CLDND1-215ENST00000507874 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
CLDND1-215ENST00000507874 RAPGEF6Q8TEU7 1601 aa24.85■■□□□ 1.57
CLDND1-215ENST00000507874 EPRSP07814 1512 aaKnown RBP24.83■■□□□ 1.57
CLDND1-215ENST00000507874 WDR7Q9Y4E6 1490 aa24.82■■□□□ 1.56
CLDND1-215ENST00000507874 ATP10BO94823 1461 aa24.8■■□□□ 1.56
CLDND1-215ENST00000507874 ARID3CA6NKF2 412 aa24.8■■□□□ 1.56
CLDND1-215ENST00000507874 PPRC1Q5VV67 1664 aaKnown RBP24.76■■□□□ 1.55
CLDND1-215ENST00000507874 ARHGAP35Q9NRY4 1499 aa24.76■■□□□ 1.55
CLDND1-215ENST00000507874 MAP3K4Q9Y6R4 1608 aa24.75■■□□□ 1.55
CLDND1-215ENST00000507874 NUP153P49790 1475 aaKnown RBP24.74■■□□□ 1.55
CLDND1-215ENST00000507874 KCNH8Q96L42 1107 aa24.69■■□□□ 1.54
CLDND1-215ENST00000507874 KDM6BO15054 1643 aa24.68■■□□□ 1.54
CLDND1-215ENST00000507874 CFAP43Q8NDM7 1665 aa24.65■■□□□ 1.54
CLDND1-215ENST00000507874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
CLDND1-215ENST00000507874 HNRNPUL2Q1KMD3 747 aaKnown RBP24.65■■□□□ 1.54
CLDND1-215ENST00000507874 FMN1Q68DA7 1419 aa24.63■■□□□ 1.53
CLDND1-215ENST00000507874 TEX14Q8IWB6 1497 aa24.61■■□□□ 1.53
CLDND1-215ENST00000507874 CD109Q6YHK3 1445 aa24.6■■□□□ 1.53
CLDND1-215ENST00000507874 CDK13Q14004 1512 aaKnown RBP24.58■■□□□ 1.52
CLDND1-215ENST00000507874 HECW1Q76N89 1606 aa24.57■■□□□ 1.52
CLDND1-215ENST00000507874 MAGI3Q5TCQ9 1506 aa24.57■■□□□ 1.52
CLDND1-215ENST00000507874 ABCA9Q8IUA7 1624 aa24.56■■□□□ 1.52
CLDND1-215ENST00000507874 COL17A1Q9UMD9 1497 aaPredicted RBP24.54■■□□□ 1.52
CLDND1-215ENST00000507874 CLIP1P30622 1438 aa24.53■■□□□ 1.52
CLDND1-215ENST00000507874 PLEKHD1A6NEE1 506 aa24.53■■□□□ 1.52
CLDND1-215ENST00000507874 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
CLDND1-215ENST00000507874 LRRIQ1Q96JM4 1722 aa24.48■■□□□ 1.51
CLDND1-215ENST00000507874 PCF11O94913 1555 aaKnown RBP24.48■■□□□ 1.51
CLDND1-215ENST00000507874 CASKIN1Q8WXD9 1431 aa24.43■■□□□ 1.5
CLDND1-215ENST00000507874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.43■■□□□ 1.5
CLDND1-215ENST00000507874 TTC37Q6PGP7 1564 aa24.4■■□□□ 1.5
CLDND1-215ENST00000507874 CEP162Q5TB80 1403 aa24.39■■□□□ 1.5
CLDND1-215ENST00000507874 LOC105371045A0A1W2PR82 267 aa24.39■■□□□ 1.49
CLDND1-215ENST00000507874 FYCO1Q9BQS8 1478 aa24.37■■□□□ 1.49
CLDND1-215ENST00000507874 CDK11AQ9UQ88 783 aaPredicted RBP24.37■■□□□ 1.49
CLDND1-215ENST00000507874 ARAP3Q8WWN8 1544 aa24.36■■□□□ 1.49
CLDND1-215ENST00000507874 CCDC18Q5T9S5 1454 aa24.35■■□□□ 1.49
CLDND1-215ENST00000507874 NEO1Q92859 1461 aa24.35■■□□□ 1.49
CLDND1-215ENST00000507874 TROQ12816 1431 aaPredicted RBP24.34■■□□□ 1.49
CLDND1-215ENST00000507874 PHLDB1Q86UU1 1377 aa24.33■■□□□ 1.49
CLDND1-215ENST00000507874 KIF14Q15058 1648 aa24.33■■□□□ 1.49
CLDND1-215ENST00000507874 FANCAO15360 1455 aa24.28■■□□□ 1.48
CLDND1-215ENST00000507874 CFAP74Q9C0B2 1584 aa24.28■■□□□ 1.48
CLDND1-215ENST00000507874 PLCH2O75038 1416 aa24.26■■□□□ 1.47
CLDND1-215ENST00000507874 MYO5CQ9NQX4 1742 aa24.26■■□□□ 1.47
CLDND1-215ENST00000507874 AKNAQ7Z591 1439 aa24.25■■□□□ 1.47
CLDND1-215ENST00000507874 RAPGEF3O95398 923 aa24.24■■□□□ 1.47
CLDND1-215ENST00000507874 FRMPD1Q5SYB0 1578 aa24.24■■□□□ 1.47
CLDND1-215ENST00000507874 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-215ENST00000507874 DENND4BO75064 1496 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-215ENST00000507874 KDM4FA0A1W2PPD8 638 aa24.18■■□□□ 1.46
CLDND1-215ENST00000507874 RICTORQ6R327 1708 aa24.18■■□□□ 1.46
CLDND1-215ENST00000507874 ADGRL1O94910 1474 aa24.15■■□□□ 1.46
CLDND1-215ENST00000507874 EFCAB2Q5VUJ9 269 aa24.15■■□□□ 1.46
CLDND1-215ENST00000507874 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
CLDND1-215ENST00000507874 ARHGAP5Q13017 1502 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms